© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|50 |
| Gene name | |
| Location | Contig_1:115171..116277 |
| Strand | - |
| Gene length (bp) | 1106 |
| Transcript length (bp) | 1041 |
| Coding sequence length (bp) | 1041 |
| Protein length (aa) | 347 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01593 | Amino_oxidase | Flavin containing amine oxidoreductase | 2.3E-04 | 190 | 260 |
| PF01593 | Amino_oxidase | Flavin containing amine oxidoreductase | 3.6E-04 | 281 | 332 |
| PF00890 | FAD_binding_2 | FAD binding domain | 6.8E-06 | 13 | 44 |
| PF01494 | FAD_binding_3 | FAD binding domain | 1.0E-05 | 11 | 46 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q6Q2J0|AOFA_PIG | Amine oxidase [flavin-containing] A OS=Sus scrofa GN=MAOA PE=2 SV=1 | 13 | 262 | 2.0E-07 |
| sp|Q6NSN2|AOF_DANRE | Amine oxidase [flavin-containing] OS=Danio rerio GN=mao PE=1 SV=1 | 298 | 338 | 4.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016491 | oxidoreductase activity | Yes |
| GO:0071949 | FAD binding | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005488 | binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0036094 | small molecule binding | No |
| GO:0043168 | anion binding | No |
| GO:0050660 | flavin adenine dinucleotide binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0043167 | ion binding | No |
| GO:0000166 | nucleotide binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 26 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|50 MTARLGPHQSAQVIVVGAGLSGLQAAHCLEQAGISCIVLQAGQDAASPVWYHGLNSSHHGRLGSLARHMGVELSA LDANDSFAFGLEANASFVRVRDNLESLCQRIDINRPAQHLPNYGSSTLHELVVSHGGDSALQASAESWAQGLFGL SAHHVSALYFLIYCKSAGGVVQLLSALDREASSTSHRQHHDLCREIASRLRPGSLQLGQSVDTVDQRRGSQCVVS TKSGQVFFSTHVLLAAAASHCRSLCFLPDLSDDKQWLRDCLESSSALHQHPASSCLAVPAPRLGELQRDQWRPEG ALFFAGAETSYVWTGHAEGALTAAHRAVDEVLCAMGRVGQLPTPRL* |
| Coding | >OphauB2|50 ATGACAGCCAGGCTCGGGCCACACCAGTCGGCGCAGGTGATTGTTGTTGGAGCTGGGCTCAGCGGGCTGCAGGCA GCCCATTGTCTGGAGCAGGCTGGCATCTCATGCATTGTGCTCCAAGCAGGCCAGGATGCGGCAAGCCCAGTCTGG TACCATGGCTTGAACAGCAGCCACCATGGGCGCCTGGGGAGCCTCGCGCGGCACATGGGTGTCGAGCTGAGTGCC CTCGACGCCAATGATTCGTTTGCTTTTGGGCTTGAGGCTAACGCGTCATTCGTCCGCGTCCGGGACAACCTCGAA AGCCTCTGTCAGCGCATCGACATTAACCGTCCAGCTCAACACCTTCCCAACTATGGTTCCTCGACGCTTCATGAG CTCGTCGTCTCGCACGGCGGCGACTCTGCTCTTCAGGCCTCGGCCGAGTCGTGGGCCCAAGGTCTGTTTGGCCTG TCGGCGCACCACGTCAGTGCCTTGTACTTTTTGATTTACTGCAAGTCAGCCGGCGGCGTCGTGCAGCTTCTCTCG GCTCTAGACAGGGAGGCCTCGTCGACGAGCCACCGGCAACACCACGACTTGTGTCGAGAGATTGCTTCACGGCTG CGTCCGGGCTCCCTTCAGCTCGGCCAGTCGGTCGACACTGTTGACCAAAGGCGAGGCAGCCAGTGCGTCGTGAGT ACCAAGTCGGGCCAAGTCTTTTTCAGCACCCACGTGCTCCTTGCGGCTGCCGCATCACACTGTCGCTCCTTGTGC TTCTTGCCCGACTTGAGCGACGACAAGCAGTGGCTGCGAGACTGCCTCGAATCCAGCTCTGCTTTGCACCAGCAC CCAGCTTCGTCTTGTCTCGCGGTGCCGGCGCCAAGGCTGGGCGAGCTGCAGCGCGATCAGTGGCGGCCCGAAGGC GCTCTCTTCTTTGCCGGCGCAGAGACGAGCTATGTGTGGACAGGACACGCCGAGGGCGCTCTTACAGCAGCGCAT AGGGCCGTGGACGAGGTCTTGTGCGCCATGGGACGAGTTGGCCAGCTTCCTACGCCGCGGCTATGA |
| Transcript | >OphauB2|50 ATGACAGCCAGGCTCGGGCCACACCAGTCGGCGCAGGTGATTGTTGTTGGAGCTGGGCTCAGCGGGCTGCAGGCA GCCCATTGTCTGGAGCAGGCTGGCATCTCATGCATTGTGCTCCAAGCAGGCCAGGATGCGGCAAGCCCAGTCTGG TACCATGGCTTGAACAGCAGCCACCATGGGCGCCTGGGGAGCCTCGCGCGGCACATGGGTGTCGAGCTGAGTGCC CTCGACGCCAATGATTCGTTTGCTTTTGGGCTTGAGGCTAACGCGTCATTCGTCCGCGTCCGGGACAACCTCGAA AGCCTCTGTCAGCGCATCGACATTAACCGTCCAGCTCAACACCTTCCCAACTATGGTTCCTCGACGCTTCATGAG CTCGTCGTCTCGCACGGCGGCGACTCTGCTCTTCAGGCCTCGGCCGAGTCGTGGGCCCAAGGTCTGTTTGGCCTG TCGGCGCACCACGTCAGTGCCTTGTACTTTTTGATTTACTGCAAGTCAGCCGGCGGCGTCGTGCAGCTTCTCTCG GCTCTAGACAGGGAGGCCTCGTCGACGAGCCACCGGCAACACCACGACTTGTGTCGAGAGATTGCTTCACGGCTG CGTCCGGGCTCCCTTCAGCTCGGCCAGTCGGTCGACACTGTTGACCAAAGGCGAGGCAGCCAGTGCGTCGTGAGT ACCAAGTCGGGCCAAGTCTTTTTCAGCACCCACGTGCTCCTTGCGGCTGCCGCATCACACTGTCGCTCCTTGTGC TTCTTGCCCGACTTGAGCGACGACAAGCAGTGGCTGCGAGACTGCCTCGAATCCAGCTCTGCTTTGCACCAGCAC CCAGCTTCGTCTTGTCTCGCGGTGCCGGCGCCAAGGCTGGGCGAGCTGCAGCGCGATCAGTGGCGGCCCGAAGGC GCTCTCTTCTTTGCCGGCGCAGAGACGAGCTATGTGTGGACAGGACACGCCGAGGGCGCTCTTACAGCAGCGCAT AGGGCCGTGGACGAGGTCTTGTGCGCCATGGGACGAGTTGGCCAGCTTCCTACGCCGCGGCTATGA |
| Gene | >OphauB2|50 ATGACAGCCAGGCTCGGGCCACACCAGTCGGCGCAGGTGATTGTTGTTGGAGCTGGGCTCAGCGGGCTGCAGGCA GCCCATTGTCTGGAGCAGGCTGGCATCTCATGCATTGTGCTCCAAGCAGGCCAGGATGCGGCAAGCCCAGTCTGG TACCATGGCTTGAACAGCAGCCACCATGGGCGCCTGGGGAGCCTCGCGCGGCACATGGGTGTCGAGCTGAGTGCC CTCGACGCCAATGATTCGTTTGCTGTACCTTGCATCGATACAACCTTCAAGGCGGTGCTTGACTGCTGATTAATT GCCTTGGTGTTTAGTTTGGGCTTGAGGCTAACGCGTCATTCGTCCGCGTCCGGGACAACCTCGAAAGCCTCTGTC AGCGCATCGACATTAACCGTCCAGCTCAACACCTTCCCAACTATGGTTCCTCGACGCTTCATGAGCTCGTCGTCT CGCACGGCGGCGACTCTGCTCTTCAGGCCTCGGCCGAGTCGTGGGCCCAAGGTCTGTTTGGCCTGTCGGCGCACC ACGTCAGTGCCTTGTACTTTTTGATTTACTGCAAGTCAGCCGGCGGCGTCGTGCAGCTTCTCTCGGCTCTAGACA GGGAGGCCTCGTCGACGAGCCACCGGCAACACCACGACTTGTGTCGAGAGATTGCTTCACGGCTGCGTCCGGGCT CCCTTCAGCTCGGCCAGTCGGTCGACACTGTTGACCAAAGGCGAGGCAGCCAGTGCGTCGTGAGTACCAAGTCGG GCCAAGTCTTTTTCAGCACCCACGTGCTCCTTGCGGCTGCCGCATCACACTGTCGCTCCTTGTGCTTCTTGCCCG ACTTGAGCGACGACAAGCAGTGGCTGCGAGACTGCCTCGAATCCAGCTCTGCTTTGCACCAGCACCCAGCTTCGT CTTGTCTCGCGGTGCCGGCGCCAAGGCTGGGCGAGCTGCAGCGCGATCAGTGGCGGCCCGAAGGCGCTCTCTTCT TTGCCGGCGCAGAGACGAGCTATGTGTGGACAGGACACGCCGAGGGCGCTCTTACAGCAGCGCATAGGGCCGTGG ACGAGGTCTTGTGCGCCATGGGACGAGTTGGCCAGCTTCCTACGCCGCGGCTATGA |