Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|4895
Gene name
LocationContig_35:5752..6430
Strand+
Gene length (bp)678
Transcript length (bp)678
Coding sequence length (bp)678
Protein length (aa) 226

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01476 LysM LysM domain 1.8E-03 123 167
PF01476 LysM LysM domain 5.7E-03 181 222

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 23 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|4895
MPSLKNLVTLIASGSLALGASAHPQAFRRAEDGGEAPPDSETCDYTVKAGYHAQSIGEMFGTDRDGILALNPELV
TEDGGFPLSPGDVLKVPCVEPKEGFEPDVSGPCLKTKVLTEEDLAGIEEGDNCFDLARRLAVGVANFQAWNPDLP
TFQDKCQDAAPGQEVCVAHFEEPPCAKRQEVKQGDNQEEIAAQNNVDVPELERLNPNLLFKGFLLSGDQLCVQGE
*
Coding >OphauB2|4895
ATGCCTTCGCTCAAAAACCTAGTCACCCTAATTGCCAGTGGCTCCTTGGCCCTCGGAGCCTCTGCGCATCCTCAA
GCCTTTCGCCGGGCTGAGGACGGAGGAGAGGCTCCGCCAGATAGCGAGACGTGTGACTATACAGTCAAAGCGGGC
TATCACGCGCAGAGCATAGGCGAAATGTTTGGGACCGATCGAGACGGAATTCTGGCGCTGAATCCTGAGCTAGTT
ACCGAGGATGGCGGTTTTCCACTAAGTCCCGGCGATGTCCTCAAGGTGCCATGCGTCGAGCCTAAAGAGGGTTTC
GAGCCAGATGTGTCGGGCCCTTGCCTCAAGACAAAGGTTCTAACGGAAGAGGATCTGGCCGGCATTGAGGAAGGC
GATAACTGTTTCGATCTTGCGCGCAGGCTTGCCGTTGGCGTGGCAAACTTTCAAGCGTGGAACCCCGACTTGCCA
ACCTTTCAGGACAAATGCCAAGACGCAGCCCCTGGCCAGGAAGTTTGCGTCGCCCATTTCGAGGAGCCACCATGC
GCCAAGAGGCAGGAGGTCAAGCAGGGCGACAACCAGGAGGAGATTGCCGCCCAAAATAATGTTGATGTGCCAGAG
TTGGAGAGACTCAACCCCAACCTGCTATTCAAGGGCTTCCTTCTCTCTGGCGACCAGCTTTGCGTTCAAGGTGAA
TAA
Transcript >OphauB2|4895
ATGCCTTCGCTCAAAAACCTAGTCACCCTAATTGCCAGTGGCTCCTTGGCCCTCGGAGCCTCTGCGCATCCTCAA
GCCTTTCGCCGGGCTGAGGACGGAGGAGAGGCTCCGCCAGATAGCGAGACGTGTGACTATACAGTCAAAGCGGGC
TATCACGCGCAGAGCATAGGCGAAATGTTTGGGACCGATCGAGACGGAATTCTGGCGCTGAATCCTGAGCTAGTT
ACCGAGGATGGCGGTTTTCCACTAAGTCCCGGCGATGTCCTCAAGGTGCCATGCGTCGAGCCTAAAGAGGGTTTC
GAGCCAGATGTGTCGGGCCCTTGCCTCAAGACAAAGGTTCTAACGGAAGAGGATCTGGCCGGCATTGAGGAAGGC
GATAACTGTTTCGATCTTGCGCGCAGGCTTGCCGTTGGCGTGGCAAACTTTCAAGCGTGGAACCCCGACTTGCCA
ACCTTTCAGGACAAATGCCAAGACGCAGCCCCTGGCCAGGAAGTTTGCGTCGCCCATTTCGAGGAGCCACCATGC
GCCAAGAGGCAGGAGGTCAAGCAGGGCGACAACCAGGAGGAGATTGCCGCCCAAAATAATGTTGATGTGCCAGAG
TTGGAGAGACTCAACCCCAACCTGCTATTCAAGGGCTTCCTTCTCTCTGGCGACCAGCTTTGCGTTCAAGGTGAA
TAA
Gene >OphauB2|4895
ATGCCTTCGCTCAAAAACCTAGTCACCCTAATTGCCAGTGGCTCCTTGGCCCTCGGAGCCTCTGCGCATCCTCAA
GCCTTTCGCCGGGCTGAGGACGGAGGAGAGGCTCCGCCAGATAGCGAGACGTGTGACTATACAGTCAAAGCGGGC
TATCACGCGCAGAGCATAGGCGAAATGTTTGGGACCGATCGAGACGGAATTCTGGCGCTGAATCCTGAGCTAGTT
ACCGAGGATGGCGGTTTTCCACTAAGTCCCGGCGATGTCCTCAAGGTGCCATGCGTCGAGCCTAAAGAGGGTTTC
GAGCCAGATGTGTCGGGCCCTTGCCTCAAGACAAAGGTTCTAACGGAAGAGGATCTGGCCGGCATTGAGGAAGGC
GATAACTGTTTCGATCTTGCGCGCAGGCTTGCCGTTGGCGTGGCAAACTTTCAAGCGTGGAACCCCGACTTGCCA
ACCTTTCAGGACAAATGCCAAGACGCAGCCCCTGGCCAGGAAGTTTGCGTCGCCCATTTCGAGGAGCCACCATGC
GCCAAGAGGCAGGAGGTCAAGCAGGGCGACAACCAGGAGGAGATTGCCGCCCAAAATAATGTTGATGTGCCAGAG
TTGGAGAGACTCAACCCCAACCTGCTATTCAAGGGCTTCCTTCTCTCTGGCGACCAGCTTTGCGTTCAAGGTGAA
TAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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