Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|488
Gene name
LocationContig_108:17879..18651
Strand-
Gene length (bp)772
Transcript length (bp)600
Coding sequence length (bp)600
Protein length (aa) 200

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04191 PEMT Phospholipid methyltransferase 3.2E-32 90 190

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|P05375|PEM2_YEAST Phosphatidyl-N-methylethanolamine N-methyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OPI3 PE=1 SV=1 6 194 5.0E-65
sp|O74827|CHO1_SCHPO Phosphatidyl-N-methylethanolamine N-methyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cho1 PE=3 SV=1 10 197 3.0E-61
sp|Q7YRH6|PEMT_BOVIN Phosphatidylethanolamine N-methyltransferase OS=Bos taurus GN=PEMT PE=2 SV=1 5 193 5.0E-50
sp|Q54SD5|PEM2_DICDI Putative phosphatidylethanolamine N-methyltransferase OS=Dictyostelium discoideum GN=pem2 PE=3 SV=1 4 188 9.0E-50
sp|Q61907|PEMT_MOUSE Phosphatidylethanolamine N-methyltransferase OS=Mus musculus GN=Pemt PE=1 SV=4 5 190 3.0E-46
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|P05375|PEM2_YEAST Phosphatidyl-N-methylethanolamine N-methyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OPI3 PE=1 SV=1 6 194 5.0E-65
sp|O74827|CHO1_SCHPO Phosphatidyl-N-methylethanolamine N-methyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cho1 PE=3 SV=1 10 197 3.0E-61
sp|Q7YRH6|PEMT_BOVIN Phosphatidylethanolamine N-methyltransferase OS=Bos taurus GN=PEMT PE=2 SV=1 5 193 5.0E-50
sp|Q54SD5|PEM2_DICDI Putative phosphatidylethanolamine N-methyltransferase OS=Dictyostelium discoideum GN=pem2 PE=3 SV=1 4 188 9.0E-50
sp|Q61907|PEMT_MOUSE Phosphatidylethanolamine N-methyltransferase OS=Mus musculus GN=Pemt PE=1 SV=4 5 190 3.0E-46
sp|Q08388|PEMT_RAT Phosphatidylethanolamine N-methyltransferase OS=Rattus norvegicus GN=Pemt PE=1 SV=2 5 190 1.0E-38
sp|Q9UBM1|PEMT_HUMAN Phosphatidylethanolamine N-methyltransferase OS=Homo sapiens GN=PEMT PE=1 SV=4 5 190 3.0E-38
sp|Q54H80|PEMTL_DICDI PEMT/PEM2 methyltransferase family protein OS=Dictyostelium discoideum GN=DDB_G0289645 PE=3 SV=1 12 194 3.0E-17
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 33 0.5

Transmembrane Domains

Domain # Start End Length
1 12 31 19
2 46 65 19
3 102 124 22
4 149 171 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|488
MASRYIDVEKKSLLVSIASIAFNPLFWNIVARQEYHNKILTRLFGGQSRRACFALAGTIFSLGMVRDLLYKQAIS
EQPSHTALEAAWVQAAAWTLIACGNTLVLWSTWALGITGTFLGDYFGILMEQMVTGFPFNVCSAPMYVGSTMSFL
GTALLLAKPAGLLLTAWVWLVYWIALRYEDAFTADIYAKRERERAGKVK*
Coding >OphauB2|488
ATGGCGTCGAGATACATTGACGTTGAGAAGAAGAGTCTGTTGGTGTCGATTGCATCCATCGCCTTTAACCCGTTG
TTTTGGAACATCGTTGCCCGCCAAGAATACCACAATAAGATTTTGACGCGGCTGTTTGGCGGCCAGTCACGCCGA
GCCTGCTTTGCGCTTGCGGGCACCATTTTCTCACTGGGCATGGTGCGAGACTTGCTGTACAAGCAGGCAATATCG
GAGCAACCCAGTCACACAGCACTCGAGGCGGCCTGGGTGCAGGCGGCGGCATGGACGCTGATTGCGTGCGGCAAC
ACGCTGGTGCTTTGGTCAACGTGGGCGCTGGGAATCACAGGTACCTTTTTGGGGGACTATTTTGGCATCCTCATG
GAGCAAATGGTGACGGGATTTCCATTTAATGTGTGCAGTGCACCTATGTATGTGGGCTCGACCATGAGCTTCCTG
GGGACGGCGCTGCTGCTGGCCAAGCCGGCGGGCTTGCTTTTGACGGCTTGGGTGTGGCTGGTGTATTGGATTGCG
CTGCGCTACGAGGATGCATTTACGGCAGACATCTACGCCAAGCGCGAGCGCGAGAGGGCAGGCAAGGTCAAGTGA
Transcript >OphauB2|488
ATGGCGTCGAGATACATTGACGTTGAGAAGAAGAGTCTGTTGGTGTCGATTGCATCCATCGCCTTTAACCCGTTG
TTTTGGAACATCGTTGCCCGCCAAGAATACCACAATAAGATTTTGACGCGGCTGTTTGGCGGCCAGTCACGCCGA
GCCTGCTTTGCGCTTGCGGGCACCATTTTCTCACTGGGCATGGTGCGAGACTTGCTGTACAAGCAGGCAATATCG
GAGCAACCCAGTCACACAGCACTCGAGGCGGCCTGGGTGCAGGCGGCGGCATGGACGCTGATTGCGTGCGGCAAC
ACGCTGGTGCTTTGGTCAACGTGGGCGCTGGGAATCACAGGTACCTTTTTGGGGGACTATTTTGGCATCCTCATG
GAGCAAATGGTGACGGGATTTCCATTTAATGTGTGCAGTGCACCTATGTATGTGGGCTCGACCATGAGCTTCCTG
GGGACGGCGCTGCTGCTGGCCAAGCCGGCGGGCTTGCTTTTGACGGCTTGGGTGTGGCTGGTGTATTGGATTGCG
CTGCGCTACGAGGATGCATTTACGGCAGACATCTACGCCAAGCGCGAGCGCGAGAGGGCAGGCAAGGTCAAGTGA
Gene >OphauB2|488
ATGGCGTCGAGATACATTGACGTTGAGAAGAAGAGTCTGTTGGGTATGATGGCCTCAGGCTGTGTGGAGAAAGGG
CAAGACAGGGCTGCTGACGGACACATTTTCAGTGTCGATTGCATCCATCGCCTTTAACCCGTTGTTTTGGAAGTG
AGTTTGACATGACTGCTGCTTCCTCAAGCAAAGACTGACAGTGATGGGGCAGCATCGTTGCCCGCCAAGGTTGGA
CGGCAAGTCGTCAATCAAATGACGGCGTGGCTGACAGGACCAATCAGAATACCACAATAAGATTTTGACGCGGCT
GTTTGGCGGCCAGTCACGCCGAGCCTGCTTTGCGCTTGCGGGCACCATTTTCTCACTGGGCATGGTGCGAGACTT
GCTGTACAAGCAGGCAATATCGGAGCAACCCAGTCACACAGCACTCGAGGCGGCCTGGGTGCAGGCGGCGGCATG
GACGCTGATTGCGTGCGGCAACACGCTGGTGCTTTGGTCAACGTGGGCGCTGGGAATCACAGGTACCTTTTTGGG
GGACTATTTTGGCATCCTCATGGAGCAAATGGTGACGGGATTTCCATTTAATGTGTGCAGTGCACCTATGTATGT
GGGCTCGACCATGAGCTTCCTGGGGACGGCGCTGCTGCTGGCCAAGCCGGCGGGCTTGCTTTTGACGGCTTGGGT
GTGGCTGGTGTATTGGATTGCGCTGCGCTACGAGGATGCATTTACGGCAGACATCTACGCCAAGCGCGAGCGCGA
GAGGGCAGGCAAGGTCAAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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