Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|4874
Gene name
LocationContig_340:2894..3887
Strand+
Gene length (bp)993
Transcript length (bp)894
Coding sequence length (bp)894
Protein length (aa) 298

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00249 Myb_DNA-binding Myb-like DNA-binding domain 6.5E-11 14 57

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 45 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|4874
MPPQAPDHPVKKQSKWSPEEDSLIIELRGSGMKWEDVSKRLPGRSAISCRLHYQNYLERRSEWDEERKNKLARLY
ERFKAEMWAKVAEELAVPWRAAEAMHWQLGEADMARRAGVVPFSLAAVNVESGQRSVAPRQSTHFQQPSEVGSRH
MTPPSPRAMYSRNPSLSMMPIGQSLRGDAHLLGQPPPPVHGAHHAGMAPEHVELYYTAGPGLAPIQSLNQPRIPG
PLPSLAELTTGIGPYGAPVETPHSAHMGMPPKQGPMMQVSQSYQSPDTQARTKRRSSPESLQRESSLRRRLG*
Coding >OphauB2|4874
ATGCCCCCCCAGGCCCCCGATCACCCCGTCAAGAAACAGAGCAAATGGTCTCCCGAAGAAGACTCCCTCATCATC
GAACTCAGGGGCAGTGGCATGAAGTGGGAGGATGTGTCGAAGCGCCTGCCGGGTCGAAGCGCCATTAGCTGTCGC
TTGCATTACCAAAACTACCTCGAGAGGCGCAGCGAGTGGGACGAAGAGCGCAAGAACAAGCTCGCCAGGCTGTAC
GAAAGATTCAAGGCCGAGATGTGGGCCAAGGTGGCCGAAGAACTCGCCGTCCCGTGGCGAGCTGCAGAGGCCATG
CATTGGCAGCTGGGCGAGGCAGACATGGCCCGTCGAGCTGGAGTCGTGCCCTTTTCTCTTGCAGCCGTCAATGTT
GAGAGCGGACAGAGGAGCGTGGCACCGCGCCAGAGCACTCACTTCCAGCAGCCGTCGGAAGTGGGCTCGCGCCAC
ATGACTCCCCCTTCGCCCCGCGCCATGTATTCACGAAACCCGTCTCTTTCCATGATGCCAATCGGGCAGTCGCTT
CGCGGAGATGCACACTTGCTCGGCCAGCCTCCACCCCCCGTCCACGGCGCTCACCATGCCGGCATGGCCCCAGAG
CATGTCGAGCTATACTACACGGCTGGGCCGGGCCTCGCACCTATACAGTCTCTAAACCAACCGCGAATTCCCGGG
CCGTTGCCCAGCCTAGCAGAGCTGACGACTGGAATCGGGCCCTACGGCGCGCCTGTCGAGACACCCCATTCGGCA
CACATGGGCATGCCTCCCAAACAGGGACCCATGATGCAGGTTTCGCAAAGCTACCAGTCGCCCGACACGCAGGCG
AGGACAAAACGAAGGTCGAGCCCCGAATCTCTACAGCGTGAAAGCAGCTTGCGAAGACGCCTTGGGTAG
Transcript >OphauB2|4874
ATGCCCCCCCAGGCCCCCGATCACCCCGTCAAGAAACAGAGCAAATGGTCTCCCGAAGAAGACTCCCTCATCATC
GAACTCAGGGGCAGTGGCATGAAGTGGGAGGATGTGTCGAAGCGCCTGCCGGGTCGAAGCGCCATTAGCTGTCGC
TTGCATTACCAAAACTACCTCGAGAGGCGCAGCGAGTGGGACGAAGAGCGCAAGAACAAGCTCGCCAGGCTGTAC
GAAAGATTCAAGGCCGAGATGTGGGCCAAGGTGGCCGAAGAACTCGCCGTCCCGTGGCGAGCTGCAGAGGCCATG
CATTGGCAGCTGGGCGAGGCAGACATGGCCCGTCGAGCTGGAGTCGTGCCCTTTTCTCTTGCAGCCGTCAATGTT
GAGAGCGGACAGAGGAGCGTGGCACCGCGCCAGAGCACTCACTTCCAGCAGCCGTCGGAAGTGGGCTCGCGCCAC
ATGACTCCCCCTTCGCCCCGCGCCATGTATTCACGAAACCCGTCTCTTTCCATGATGCCAATCGGGCAGTCGCTT
CGCGGAGATGCACACTTGCTCGGCCAGCCTCCACCCCCCGTCCACGGCGCTCACCATGCCGGCATGGCCCCAGAG
CATGTCGAGCTATACTACACGGCTGGGCCGGGCCTCGCACCTATACAGTCTCTAAACCAACCGCGAATTCCCGGG
CCGTTGCCCAGCCTAGCAGAGCTGACGACTGGAATCGGGCCCTACGGCGCGCCTGTCGAGACACCCCATTCGGCA
CACATGGGCATGCCTCCCAAACAGGGACCCATGATGCAGGTTTCGCAAAGCTACCAGTCGCCCGACACGCAGGCG
AGGACAAAACGAAGGTCGAGCCCCGAATCTCTACAGCGTGAAAGCAGCTTGCGAAGACGCCTTGGGTAG
Gene >OphauB2|4874
ATGCCCCCCCAGGCCCCCGATCACCCCGTCAAGAAACAGAGCAAATGGTCTCCCGAAGAAGACTCCCTCATCATC
GAACTCAGGGGCAGTGGCATGAAGTGGGAGGATGTGTCGAAGCGCCTGCCGGGTCGAAGCGCCATTAGCTGTCGC
TTGCATTACCAAAACTACCTCGAGAGGCGCAGCGAGTGGGACGAAGAGCGCAAGAACAAGCTCGCCAGGCTGTAC
GAAAGGTATTTCTTTGCCCCGCTCCACCCACCTCGCTTCCTGAAGCTCGTCCCTGTTTTCTCGGGCACCAGTACT
GCTCAAGACTGACTTGGTTCGACGTCAAGATTCAAGGCCGAGATGTGGGCCAAGGTGGCCGAAGAACTCGCCGTC
CCGTGGCGAGCTGCAGAGGCCATGCATTGGCAGCTGGGCGAGGCAGACATGGCCCGTCGAGCTGGAGTCGTGCCC
TTTTCTCTTGCAGCCGTCAATGTTGAGAGCGGACAGAGGAGCGTGGCACCGCGCCAGAGCACTCACTTCCAGCAG
CCGTCGGAAGTGGGCTCGCGCCACATGACTCCCCCTTCGCCCCGCGCCATGTATTCACGAAACCCGTCTCTTTCC
ATGATGCCAATCGGGCAGTCGCTTCGCGGAGATGCACACTTGCTCGGCCAGCCTCCACCCCCCGTCCACGGCGCT
CACCATGCCGGCATGGCCCCAGAGCATGTCGAGCTATACTACACGGCTGGGCCGGGCCTCGCACCTATACAGTCT
CTAAACCAACCGCGAATTCCCGGGCCGTTGCCCAGCCTAGCAGAGCTGACGACTGGAATCGGGCCCTACGGCGCG
CCTGTCGAGACACCCCATTCGGCACACATGGGCATGCCTCCCAAACAGGGACCCATGATGCAGGTTTCGCAAAGC
TACCAGTCGCCCGACACGCAGGCGAGGACAAAACGAAGGTCGAGCCCCGAATCTCTACAGCGTGAAAGCAGCTTG
CGAAGACGCCTTGGGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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