Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|4861
Gene name
LocationContig_34:109393..110559
Strand-
Gene length (bp)1166
Transcript length (bp)1107
Coding sequence length (bp)1107
Protein length (aa) 369

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00487 FA_desaturase Fatty acid desaturase 1.4E-25 87 315
PF08557 Lipid_DES Sphingolipid Delta4-desaturase (DES) 3.4E-18 23 58

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|C4R613|DEGS_PICPG Sphingolipid delta(4)-desaturase OS=Komagataella pastoris (strain GS115 / ATCC 20864) GN=PAS_chr3_0939 PE=1 SV=2 21 360 1.0E-131
sp|O59715|DEGS_SCHPO Sphingolipid delta(4)-desaturase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dsd1 PE=1 SV=1 3 345 4.0E-128
sp|Q5AJX2|DEGS_CANAL Sphingolipid delta(4)-desaturase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DES1 PE=1 SV=1 24 349 3.0E-115
sp|Q6H5U3|DES1L_ORYSJ Sphingolipid delta(4)-desaturase DES1-like OS=Oryza sativa subsp. japonica GN=Os02g0639600 PE=2 SV=1 15 344 5.0E-98
sp|Q9ZPH4|DES1L_ARATH Sphingolipid delta(4)-desaturase DES1-like OS=Arabidopsis thaliana GN=At4g04930 PE=2 SV=1 25 344 6.0E-93
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|C4R613|DEGS_PICPG Sphingolipid delta(4)-desaturase OS=Komagataella pastoris (strain GS115 / ATCC 20864) GN=PAS_chr3_0939 PE=1 SV=2 21 360 1.0E-131
sp|O59715|DEGS_SCHPO Sphingolipid delta(4)-desaturase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dsd1 PE=1 SV=1 3 345 4.0E-128
sp|Q5AJX2|DEGS_CANAL Sphingolipid delta(4)-desaturase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DES1 PE=1 SV=1 24 349 3.0E-115
sp|Q6H5U3|DES1L_ORYSJ Sphingolipid delta(4)-desaturase DES1-like OS=Oryza sativa subsp. japonica GN=Os02g0639600 PE=2 SV=1 15 344 5.0E-98
sp|Q9ZPH4|DES1L_ARATH Sphingolipid delta(4)-desaturase DES1-like OS=Arabidopsis thaliana GN=At4g04930 PE=2 SV=1 25 344 6.0E-93
sp|Q6QHC5|DEGS2_HUMAN Sphingolipid delta(4)-desaturase/C4-monooxygenase DES2 OS=Homo sapiens GN=DEGS2 PE=1 SV=2 23 343 5.0E-84
sp|Q564G3|DEGS2_RAT Sphingolipid delta(4)-desaturase/C4-monooxygenase DES2 OS=Rattus norvegicus GN=Degs2 PE=1 SV=1 15 344 2.0E-82
sp|Q68FB8|DEGS1_XENTR Sphingolipid delta(4)-desaturase DES1 OS=Xenopus tropicalis GN=degs1 PE=2 SV=1 25 349 4.0E-82
sp|Q5F3C1|DEGS1_CHICK Sphingolipid delta(4)-desaturase DES1 OS=Gallus gallus GN=DEGS1 PE=2 SV=1 25 349 1.0E-81
sp|Q8R2F2|DEGS2_MOUSE Sphingolipid delta(4)-desaturase/C4-monooxygenase DES2 OS=Mus musculus GN=Degs2 PE=1 SV=1 15 344 1.0E-81
sp|Q3ZBY7|DEGS1_BOVIN Sphingolipid delta(4)-desaturase DES1 OS=Bos taurus GN=DEGS1 PE=2 SV=1 25 350 8.0E-81
sp|Q5XIF5|DEGS1_RAT Sphingolipid delta(4)-desaturase DES1 OS=Rattus norvegicus GN=Degs1 PE=2 SV=1 25 350 4.0E-79
sp|Q0II71|DEGS2_BOVIN Sphingolipid delta(4)-desaturase/C4-monooxygenase DES2 OS=Bos taurus GN=DEGS2 PE=2 SV=1 23 343 1.0E-78
sp|Q6UQ04|DEGS1_MICFO Sphingolipid delta(4)-desaturase DES1 OS=Microtus fortis GN=DEGS1 PE=2 SV=1 25 347 2.0E-78
sp|G5EC63|DEGS2_CAEEL Putative sphingolipid delta(4)-desaturase/C4-monooxygenase OS=Caenorhabditis elegans GN=ttm-5 PE=3 SV=1 25 344 3.0E-78
sp|Q5RE51|DEGS1_PONAB Sphingolipid delta(4)-desaturase DES1 OS=Pongo abelii GN=DEGS1 PE=2 SV=1 25 350 1.0E-77
sp|O15121|DEGS1_HUMAN Sphingolipid delta(4)-desaturase DES1 OS=Homo sapiens GN=DEGS1 PE=1 SV=1 25 350 2.0E-77
sp|O44186|DEGS1_CAEEL Putative sphingolipid delta(4)-desaturase OS=Caenorhabditis elegans GN=F33D4.4 PE=3 SV=1 23 344 9.0E-77
sp|O09005|DEGS1_MOUSE Sphingolipid delta(4)-desaturase DES1 OS=Mus musculus GN=Degs1 PE=1 SV=1 25 350 1.0E-76
[Show less]

GO

GO Term Description Terminal node
GO:0006629 lipid metabolic process Yes
GO:0044238 primary metabolic process No
GO:0008152 metabolic process No
GO:0008150 biological_process No
GO:0071704 organic substance metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 22 0.45

Transmembrane Domains

Domain # Start End Length
1 58 77 19
2 87 106 19
3 118 140 22
4 166 188 22
5 201 220 19
6 224 246 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|4861
MPSLASTTLTKPLWGKDAAHGHEGDFFWTYTEEPHRTRRLAIIKAHPEVTKLCGPEPLTKFLVAGVVSLQILVAY
ALRNTPFWSLRFWAAAYIIGATANQNLFLAIHEISHNLAFRSASANRLLAIFANLAIAVPYSASFRPYHLTHHKS
LGVDGLDTDLPTAAEALVLDSILGKAFFCTFQIFFYALRPMAVYRVPFTWVHYLNILVQVVFDVLLVRIASPNAL
LYLLLSSFLAGSLHPLAGHFIAEHYVYQTISPSARDAENRIPVPETFSYYGPLNWFTYNVGLHNEHHDFPAVPWS
RLPALHALASEFYKDLPRHESWVYAIWRFIWDENVGIQCRVKRKNGGRVVGGGKAAPTQAWTESEVQA*
Coding >OphauB2|4861
ATGCCGTCGCTTGCCTCGACGACGCTGACCAAGCCCCTCTGGGGCAAGGACGCAGCCCACGGCCATGAAGGAGAC
TTTTTCTGGACGTATACCGAAGAGCCGCATCGGACGCGACGCCTCGCCATCATCAAGGCGCATCCAGAGGTGACC
AAACTCTGTGGCCCCGAACCCCTGACCAAGTTTCTCGTTGCCGGCGTCGTCAGTCTTCAAATCCTCGTTGCCTAT
GCTCTGCGCAACACGCCCTTTTGGTCTCTCCGCTTCTGGGCAGCAGCATACATTATTGGCGCAACAGCCAACCAG
AACCTCTTTCTCGCCATTCACGAAATCTCTCACAACTTGGCCTTTCGCAGCGCGTCTGCCAACCGCTTGCTGGCC
ATTTTTGCAAACCTGGCCATTGCCGTGCCGTATAGCGCCTCGTTTCGCCCCTATCATCTCACCCACCACAAGTCG
TTGGGCGTTGATGGGCTCGACACGGATCTGCCCACTGCGGCAGAGGCGCTCGTGCTCGACTCTATTCTCGGCAAG
GCCTTTTTTTGCACCTTTCAAATCTTCTTCTACGCCCTCCGGCCCATGGCGGTCTATCGCGTGCCCTTTACTTGG
GTCCATTACTTGAATATCCTGGTCCAGGTCGTCTTTGACGTGTTGCTTGTGCGCATCGCGTCGCCAAACGCCCTT
TTATATCTCTTGCTTTCCTCCTTTCTCGCTGGCAGTCTGCACCCGCTCGCCGGCCACTTTATTGCCGAGCACTAC
GTCTACCAAACCATTTCTCCCTCGGCTCGCGATGCCGAAAACCGCATTCCCGTGCCCGAAACTTTTTCCTACTAT
GGGCCGCTGAATTGGTTCACGTATAATGTCGGCCTGCACAATGAGCATCACGACTTTCCCGCCGTCCCGTGGTCG
AGACTGCCCGCGCTGCATGCCCTGGCCAGCGAGTTTTATAAAGACTTGCCGCGCCATGAAAGCTGGGTATATGCC
ATTTGGCGCTTCATTTGGGACGAAAACGTGGGCATCCAGTGCCGCGTCAAGCGCAAGAATGGGGGCAGAGTGGTG
GGCGGTGGTAAAGCTGCGCCGACGCAAGCATGGACAGAGTCCGAGGTGCAGGCTTGA
Transcript >OphauB2|4861
ATGCCGTCGCTTGCCTCGACGACGCTGACCAAGCCCCTCTGGGGCAAGGACGCAGCCCACGGCCATGAAGGAGAC
TTTTTCTGGACGTATACCGAAGAGCCGCATCGGACGCGACGCCTCGCCATCATCAAGGCGCATCCAGAGGTGACC
AAACTCTGTGGCCCCGAACCCCTGACCAAGTTTCTCGTTGCCGGCGTCGTCAGTCTTCAAATCCTCGTTGCCTAT
GCTCTGCGCAACACGCCCTTTTGGTCTCTCCGCTTCTGGGCAGCAGCATACATTATTGGCGCAACAGCCAACCAG
AACCTCTTTCTCGCCATTCACGAAATCTCTCACAACTTGGCCTTTCGCAGCGCGTCTGCCAACCGCTTGCTGGCC
ATTTTTGCAAACCTGGCCATTGCCGTGCCGTATAGCGCCTCGTTTCGCCCCTATCATCTCACCCACCACAAGTCG
TTGGGCGTTGATGGGCTCGACACGGATCTGCCCACTGCGGCAGAGGCGCTCGTGCTCGACTCTATTCTCGGCAAG
GCCTTTTTTTGCACCTTTCAAATCTTCTTCTACGCCCTCCGGCCCATGGCGGTCTATCGCGTGCCCTTTACTTGG
GTCCATTACTTGAATATCCTGGTCCAGGTCGTCTTTGACGTGTTGCTTGTGCGCATCGCGTCGCCAAACGCCCTT
TTATATCTCTTGCTTTCCTCCTTTCTCGCTGGCAGTCTGCACCCGCTCGCCGGCCACTTTATTGCCGAGCACTAC
GTCTACCAAACCATTTCTCCCTCGGCTCGCGATGCCGAAAACCGCATTCCCGTGCCCGAAACTTTTTCCTACTAT
GGGCCGCTGAATTGGTTCACGTATAATGTCGGCCTGCACAATGAGCATCACGACTTTCCCGCCGTCCCGTGGTCG
AGACTGCCCGCGCTGCATGCCCTGGCCAGCGAGTTTTATAAAGACTTGCCGCGCCATGAAAGCTGGGTATATGCC
ATTTGGCGCTTCATTTGGGACGAAAACGTGGGCATCCAGTGCCGCGTCAAGCGCAAGAATGGGGGCAGAGTGGTG
GGCGGTGGTAAAGCTGCGCCGACGCAAGCATGGACAGAGTCCGAGGTGCAGGCTTGA
Gene >OphauB2|4861
ATGCCGTCGCTTGCCTCGACGACGCTGACCAAGCCCCTCTGGGGCAAGGACGCAGCCCACGGCCATGAAGGAGAC
TTTTTCTGGACGTATACCGAAGAGCCGCATCGGACGCGACGCCTCGCCATCATCAAGGCGCATCCAGAGGTACAA
GGCATTCACAATCCTCCACCCTTTGAAAGTTCAAGGCCCTGACGAAGCAACAGGTGACCAAACTCTGTGGCCCCG
AACCCCTGACCAAGTTTCTCGTTGCCGGCGTCGTCAGTCTTCAAATCCTCGTTGCCTATGCTCTGCGCAACACGC
CCTTTTGGTCTCTCCGCTTCTGGGCAGCAGCATACATTATTGGCGCAACAGCCAACCAGAACCTCTTTCTCGCCA
TTCACGAAATCTCTCACAACTTGGCCTTTCGCAGCGCGTCTGCCAACCGCTTGCTGGCCATTTTTGCAAACCTGG
CCATTGCCGTGCCGTATAGCGCCTCGTTTCGCCCCTATCATCTCACCCACCACAAGTCGTTGGGCGTTGATGGGC
TCGACACGGATCTGCCCACTGCGGCAGAGGCGCTCGTGCTCGACTCTATTCTCGGCAAGGCCTTTTTTTGCACCT
TTCAAATCTTCTTCTACGCCCTCCGGCCCATGGCGGTCTATCGCGTGCCCTTTACTTGGGTCCATTACTTGAATA
TCCTGGTCCAGGTCGTCTTTGACGTGTTGCTTGTGCGCATCGCGTCGCCAAACGCCCTTTTATATCTCTTGCTTT
CCTCCTTTCTCGCTGGCAGTCTGCACCCGCTCGCCGGCCACTTTATTGCCGAGCACTACGTCTACCAAACCATTT
CTCCCTCGGCTCGCGATGCCGAAAACCGCATTCCCGTGCCCGAAACTTTTTCCTACTATGGGCCGCTGAATTGGT
TCACGTATAATGTCGGCCTGCACAATGAGCATCACGACTTTCCCGCCGTCCCGTGGTCGAGACTGCCCGCGCTGC
ATGCCCTGGCCAGCGAGTTTTATAAAGACTTGCCGCGCCATGAAAGCTGGGTATATGCCATTTGGCGCTTCATTT
GGGACGAAAACGTGGGCATCCAGTGCCGCGTCAAGCGCAAGAATGGGGGCAGAGTGGTGGGCGGTGGTAAAGCTG
CGCCGACGCAAGCATGGACAGAGTCCGAGGTGCAGGCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail