© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|4832 |
| Gene name | |
| Location | Contig_34:39521..40855 |
| Strand | + |
| Gene length (bp) | 1334 |
| Transcript length (bp) | 1191 |
| Coding sequence length (bp) | 1191 |
| Protein length (aa) | 397 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF11710 | Git3 | G protein-coupled glucose receptor regulating Gpa2 | 4.4E-19 | 16 | 201 |
| PF05462 | Dicty_CAR | Slime mold cyclic AMP receptor | 4.9E-06 | 131 | 184 |
| PF00002 | 7tm_2 | 7 transmembrane receptor (Secretin family) | 1.3E-04 | 11 | 193 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0007186 | G protein-coupled receptor signaling pathway | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0004930 | G protein-coupled receptor activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0060089 | molecular transducer activity | No |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0008150 | biological_process | No |
| GO:0050789 | regulation of biological process | No |
| GO:0007165 | signal transduction | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0004888 | transmembrane signaling receptor activity | No |
| GO:0050794 | regulation of cellular process | No |
| GO:0005575 | cellular_component | No |
| GO:0038023 | signaling receptor activity | No |
| GO:0065007 | biological regulation | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 30 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 10 | 32 | 22 |
| 2 | 45 | 67 | 22 |
| 3 | 97 | 119 | 22 |
| 4 | 131 | 153 | 22 |
| 5 | 173 | 195 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|4832 MSQYEPPDLAIAVPTFIGSLLSFIATSIAITLHLLSPPKRHFRHALIINLLVADFINSLNNTVSGAVVLSRGNQP ESLAPDAACLANAWLGQFSVQAVDFNILIISIVVLYTVLNSRIITESSTITTVGICALAWLPGLITSCIALGTHI FGHVSGNWCWIRSEFLGMRYGLTHGWRIAIFVATIAIYTFIYIHLKRQFGRFRVSAPSTGTTTTRDQGFIDDGTG DTQHILVSNTFAVSHELEERHPQSHEPITPSEPSPPSKAAFVSVAAVEDENDPSSSSSSSLQQQNKHAHFRPLPP RPEPVRRTAPKLPAPPNLKRMLLMNGYPIAYIILWLPGIINRLTESLGTSPRWLRALQSSTQFIGFVNACSYGFS EHLRRASRQWMKRRGFLRAGG* |
| Coding | >OphauB2|4832 ATGAGCCAGTACGAGCCTCCCGATCTTGCCATTGCAGTCCCGACATTTATCGGCTCTTTGCTCTCCTTCATCGCC ACCTCCATCGCCATTACGCTCCATCTCCTCAGCCCACCCAAGCGCCATTTTCGCCATGCCCTCATCATCAATCTC CTCGTTGCCGATTTCATCAATAGTCTCAACAATACCGTCTCGGGCGCAGTCGTCTTGAGTCGTGGCAACCAGCCC GAGAGTTTGGCTCCAGATGCAGCCTGTCTTGCCAATGCCTGGCTGGGCCAGTTTTCAGTCCAAGCTGTCGACTTT AACATTCTCATCATTTCCATCGTCGTCTTGTACACGGTGCTTAATAGCAGAATCATTACCGAGTCGTCCACCATT ACCACTGTGGGAATCTGCGCTCTCGCCTGGCTGCCCGGCCTCATTACCAGTTGTATAGCACTCGGCACACACATC TTTGGCCACGTCAGCGGCAACTGGTGCTGGATCAGATCCGAGTTTCTAGGCATGCGATATGGCCTCACGCACGGC TGGCGCATCGCCATTTTCGTGGCAACCATTGCCATTTACACCTTTATCTACATTCACCTCAAGCGCCAGTTTGGC CGGTTTCGAGTCAGCGCTCCCTCAACCGGCACCACAACCACGCGCGACCAGGGCTTCATCGATGATGGCACTGGC GACACGCAGCACATTCTCGTTTCCAACACCTTTGCCGTCTCCCATGAGCTGGAGGAGCGACACCCCCAATCTCAT GAGCCAATCACGCCTTCAGAGCCCTCTCCTCCTTCCAAGGCGGCCTTTGTCTCTGTAGCAGCCGTTGAAGACGAA AACGACCCGTCGTCGTCATCGTCGTCATCGCTACAGCAACAAAACAAACACGCGCATTTCCGGCCGCTGCCTCCC CGGCCTGAACCGGTCCGTCGAACAGCTCCAAAGCTTCCAGCGCCGCCCAACCTCAAGAGAATGCTCCTCATGAAT GGATACCCCATTGCCTATATTATTCTCTGGCTGCCCGGCATCATTAACCGCTTGACCGAGTCGCTCGGCACGTCT CCGCGCTGGCTACGCGCCTTGCAATCCTCGACGCAATTCATTGGCTTTGTCAATGCTTGCTCGTACGGATTCAGC GAGCACTTGCGCCGCGCTTCACGGCAATGGATGAAGAGGCGCGGCTTTCTTCGCGCCGGAGGCTGA |
| Transcript | >OphauB2|4832 ATGAGCCAGTACGAGCCTCCCGATCTTGCCATTGCAGTCCCGACATTTATCGGCTCTTTGCTCTCCTTCATCGCC ACCTCCATCGCCATTACGCTCCATCTCCTCAGCCCACCCAAGCGCCATTTTCGCCATGCCCTCATCATCAATCTC CTCGTTGCCGATTTCATCAATAGTCTCAACAATACCGTCTCGGGCGCAGTCGTCTTGAGTCGTGGCAACCAGCCC GAGAGTTTGGCTCCAGATGCAGCCTGTCTTGCCAATGCCTGGCTGGGCCAGTTTTCAGTCCAAGCTGTCGACTTT AACATTCTCATCATTTCCATCGTCGTCTTGTACACGGTGCTTAATAGCAGAATCATTACCGAGTCGTCCACCATT ACCACTGTGGGAATCTGCGCTCTCGCCTGGCTGCCCGGCCTCATTACCAGTTGTATAGCACTCGGCACACACATC TTTGGCCACGTCAGCGGCAACTGGTGCTGGATCAGATCCGAGTTTCTAGGCATGCGATATGGCCTCACGCACGGC TGGCGCATCGCCATTTTCGTGGCAACCATTGCCATTTACACCTTTATCTACATTCACCTCAAGCGCCAGTTTGGC CGGTTTCGAGTCAGCGCTCCCTCAACCGGCACCACAACCACGCGCGACCAGGGCTTCATCGATGATGGCACTGGC GACACGCAGCACATTCTCGTTTCCAACACCTTTGCCGTCTCCCATGAGCTGGAGGAGCGACACCCCCAATCTCAT GAGCCAATCACGCCTTCAGAGCCCTCTCCTCCTTCCAAGGCGGCCTTTGTCTCTGTAGCAGCCGTTGAAGACGAA AACGACCCGTCGTCGTCATCGTCGTCATCGCTACAGCAACAAAACAAACACGCGCATTTCCGGCCGCTGCCTCCC CGGCCTGAACCGGTCCGTCGAACAGCTCCAAAGCTTCCAGCGCCGCCCAACCTCAAGAGAATGCTCCTCATGAAT GGATACCCCATTGCCTATATTATTCTCTGGCTGCCCGGCATCATTAACCGCTTGACCGAGTCGCTCGGCACGTCT CCGCGCTGGCTACGCGCCTTGCAATCCTCGACGCAATTCATTGGCTTTGTCAATGCTTGCTCGTACGGATTCAGC GAGCACTTGCGCCGCGCTTCACGGCAATGGATGAAGAGGCGCGGCTTTCTTCGCGCCGGAGGCTGA |
| Gene | >OphauB2|4832 ATGAGCCAGTACGAGCCTCCCGATCTTGCCATTGCAGTCCCGACATTTATCGGCTCTTTGCTCTCCTTCATCGCC ACCTCCATCGCCATTACGCTCCATCTCCTCAGCCCACCCAAGCGCCATTTTCGCCATGCCCTCATCATCAATCTC CTCGTTGCCGGTAAGCCCTCACCGACAATCAATCAAGCAAGGGCTACTTGGGAGAAGAGGGGGCGCGCTAACAGT GGCCAGATTTCATCAATAGTCTCAACAATACCGTCTCGGGCGCAGTCGTCTTGAGTCGTGGCAACCAGCCCGAGA GTTTGGCTCCAGATGCAGCCTGTCTTGCCAATGCCTGGCTGGGCCAGTTTTCAGTCCAAGCTGTCGACTTTAACA TTCTCATCATTTCCATCGTCGTCTTGTACACGGTGCTTAATAGCAGAATCATTACCGAGTCGTCCACCATTACCA CTGTGGGAATCTGCGCTCTCGCCTGGCTGCCCGGCCTCATTACCAGTAAGAACCCTCCCCCCCGCCGCACGCAAT TACTTTTGCACCGTTTACTAAATACTGCCCCTCGGTGTCTAGGTTGTATAGCACTCGGCACACACATCTTTGGCC ACGTCAGCGGCAACTGGTGCTGGATCAGATCCGAGTTTCTAGGCATGCGATATGGCCTCACGCACGGCTGGCGCA TCGCCATTTTCGTGGCAACCATTGCCATTTACACCTTTATCTACATTCACCTCAAGCGCCAGTTTGGCCGGTTTC GAGTCAGCGCTCCCTCAACCGGCACCACAACCACGCGCGACCAGGGCTTCATCGATGATGGCACTGGCGACACGC AGCACATTCTCGTTTCCAACACCTTTGCCGTCTCCCATGAGCTGGAGGAGCGACACCCCCAATCTCATGAGCCAA TCACGCCTTCAGAGCCCTCTCCTCCTTCCAAGGCGGCCTTTGTCTCTGTAGCAGCCGTTGAAGACGAAAACGACC CGTCGTCGTCATCGTCGTCATCGCTACAGCAACAAAACAAACACGCGCATTTCCGGCCGCTGCCTCCCCGGCCTG AACCGGTCCGTCGAACAGCTCCAAAGCTTCCAGCGCCGCCCAACCTCAAGAGAATGCTCCTCATGAATGGATACC CCATTGCCTATATTATTCTCTGGCTGCCCGGCATCATTAACCGCTTGACCGAGTCGCTCGGCACGTCTCCGCGCT GGCTACGCGCCTTGCAATCCTCGACGCAATTCATTGGCTTTGTCAATGCTTGCTCGTACGGATTCAGCGAGCACT TGCGCCGCGCTTCACGGCAATGGATGAAGAGGCGCGGCTTTCTTCGCGCCGGAGGCTGA |