© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|480 |
| Gene name | |
| Location | Contig_107:66155..67664 |
| Strand | - |
| Gene length (bp) | 1509 |
| Transcript length (bp) | 1509 |
| Coding sequence length (bp) | 1509 |
| Protein length (aa) | 503 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01565 | FAD_binding_4 | FAD binding domain | 8.0E-14 | 11 | 133 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q60HC5|DHC24_MACFA | Delta(24)-sterol reductase OS=Macaca fascicularis GN=DHCR24 PE=2 SV=2 | 49 | 451 | 4.0E-46 |
| sp|Q15392|DHC24_HUMAN | Delta(24)-sterol reductase OS=Homo sapiens GN=DHCR24 PE=1 SV=2 | 49 | 451 | 5.0E-46 |
| sp|Q5BQE6|DHC24_RAT | Delta(24)-sterol reductase OS=Rattus norvegicus GN=Dhcr24 PE=2 SV=2 | 49 | 451 | 7.0E-44 |
| sp|Q8VCH6|DHC24_MOUSE | Delta(24)-sterol reductase OS=Mus musculus GN=Dhcr24 PE=1 SV=1 | 49 | 451 | 8.0E-44 |
| sp|Q39085|DIM_ARATH | Delta(24)-sterol reductase OS=Arabidopsis thaliana GN=DIM PE=1 SV=2 | 2 | 452 | 6.0E-38 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q60HC5|DHC24_MACFA | Delta(24)-sterol reductase OS=Macaca fascicularis GN=DHCR24 PE=2 SV=2 | 49 | 451 | 4.0E-46 |
| sp|Q15392|DHC24_HUMAN | Delta(24)-sterol reductase OS=Homo sapiens GN=DHCR24 PE=1 SV=2 | 49 | 451 | 5.0E-46 |
| sp|Q5BQE6|DHC24_RAT | Delta(24)-sterol reductase OS=Rattus norvegicus GN=Dhcr24 PE=2 SV=2 | 49 | 451 | 7.0E-44 |
| sp|Q8VCH6|DHC24_MOUSE | Delta(24)-sterol reductase OS=Mus musculus GN=Dhcr24 PE=1 SV=1 | 49 | 451 | 8.0E-44 |
| sp|Q39085|DIM_ARATH | Delta(24)-sterol reductase OS=Arabidopsis thaliana GN=DIM PE=1 SV=2 | 2 | 452 | 6.0E-38 |
| sp|O17397|DIML_CAEEL | Diminuto-like protein OS=Caenorhabditis elegans GN=F52H2.6 PE=3 SV=1 | 38 | 451 | 8.0E-34 |
| sp|P93472|DIM_PEA | Delta(24)-sterol reductase OS=Pisum sativum GN=DIM PE=1 SV=1 | 30 | 452 | 2.0E-33 |
| sp|Q75K78|CKX9_ORYSJ | Cytokinin dehydrogenase 9 OS=Oryza sativa subsp. japonica GN=CKX9 PE=2 SV=1 | 72 | 222 | 7.0E-14 |
| sp|Q5JLP4|CKX4_ORYSJ | Cytokinin dehydrogenase 4 OS=Oryza sativa subsp. japonica GN=CKX4 PE=2 SV=1 | 72 | 222 | 6.0E-13 |
| sp|Q9LY71|CKX6_ARATH | Cytokinin dehydrogenase 6 OS=Arabidopsis thaliana GN=CKX6 PE=2 SV=2 | 4 | 230 | 4.0E-12 |
| sp|Q9FUJ1|CKX7_ARATH | Cytokinin dehydrogenase 7 OS=Arabidopsis thaliana GN=CKX7 PE=1 SV=1 | 71 | 203 | 4.0E-12 |
| sp|Q8LNV6|CKX3_ORYSJ | Cytokinin dehydrogenase 3 OS=Oryza sativa subsp. japonica GN=CKX3 PE=2 SV=1 | 72 | 173 | 8.0E-11 |
| sp|A3AVP1|CKX8_ORYSJ | Cytokinin dehydrogenase 8 OS=Oryza sativa subsp. japonica GN=CKX8 PE=3 SV=1 | 72 | 173 | 6.0E-10 |
| sp|A2XVN3|CKX8_ORYSI | Cytokinin dehydrogenase 8 OS=Oryza sativa subsp. indica GN=CKX8 PE=3 SV=1 | 72 | 173 | 6.0E-10 |
| sp|Q5Z620|CKX10_ORYSJ | Cytokinin dehydrogenase 10 OS=Oryza sativa subsp. japonica GN=CKX10 PE=3 SV=1 | 11 | 173 | 1.0E-09 |
| sp|O22213|CKX1_ARATH | Cytokinin dehydrogenase 1 OS=Arabidopsis thaliana GN=CKX1 PE=1 SV=1 | 72 | 206 | 2.0E-09 |
| sp|Q7SGY1|ALO_NEUCR | Putative D-arabinono-1,4-lactone oxidase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=alo-1 PE=3 SV=1 | 43 | 165 | 2.0E-09 |
| sp|Q6YW50|CKX7_ORYSJ | Cytokinin dehydrogenase 7 OS=Oryza sativa subsp. japonica GN=CKX7 PE=3 SV=1 | 73 | 206 | 1.0E-08 |
| sp|Q9LTS3|CKX3_ARATH | Cytokinin dehydrogenase 3 OS=Arabidopsis thaliana GN=CKX3 PE=1 SV=1 | 7 | 222 | 3.0E-08 |
| sp|P46377|FAS5_RHOFA | Uncharacterized oxidoreductase ORF5 in fasciation locus OS=Rhodococcus fascians GN=fas5 PE=2 SV=1 | 62 | 208 | 7.0E-08 |
| sp|Q6YW51|CKX6_ORYSJ | Cytokinin dehydrogenase 6 OS=Oryza sativa subsp. japonica GN=CKX6 PE=3 SV=1 | 39 | 206 | 8.0E-08 |
| sp|Q67YU0|CKX5_ARATH | Cytokinin dehydrogenase 5 OS=Arabidopsis thaliana GN=CKX5 PE=2 SV=1 | 73 | 203 | 1.0E-07 |
| sp|A0R607|DPRE1_MYCS2 | FAD-dependent decaprenylphosphoryl-beta-D-ribofuranose 2-oxidase OS=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) GN=dprE1 PE=1 SV=2 | 43 | 154 | 2.0E-07 |
| sp|Q0JQ12|CKX1_ORYSJ | Cytokinin dehydrogenase 1 OS=Oryza sativa subsp. japonica GN=CKX1 PE=3 SV=2 | 73 | 212 | 2.0E-07 |
| sp|Q9FUJ3|CKX2_ARATH | Cytokinin dehydrogenase 2 OS=Arabidopsis thaliana GN=CKX2 PE=1 SV=2 | 43 | 203 | 3.0E-07 |
| sp|Q4ADV8|CKX2_ORYSJ | Cytokinin dehydrogenase 2 OS=Oryza sativa subsp. japonica GN=CKX2 PE=2 SV=1 | 11 | 179 | 3.0E-07 |
| sp|Q9FUJ2|CKX4_ARATH | Cytokinin dehydrogenase 4 OS=Arabidopsis thaliana GN=CKX4 PE=1 SV=2 | 73 | 200 | 5.0E-07 |
| sp|Q6Z955|CKX11_ORYSJ | Cytokinin dehydrogenase 11 OS=Oryza sativa subsp. japonica GN=CKX11 PE=2 SV=1 | 67 | 203 | 1.0E-06 |
| sp|Q9T0N8|CKX1_MAIZE | Cytokinin dehydrogenase 1 OS=Zea mays GN=CKX1 PE=1 SV=2 | 73 | 173 | 1.0E-06 |
| sp|P94535|GLCD_BACSU | Glycolate oxidase subunit GlcD OS=Bacillus subtilis (strain 168) GN=glcD PE=3 SV=1 | 49 | 194 | 3.0E-06 |
| sp|Q94AX4|DLD_ARATH | D-lactate dehydrogenase [cytochrome], mitochondrial OS=Arabidopsis thaliana GN=DLD PE=1 SV=1 | 43 | 162 | 9.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0050660 | flavin adenine dinucleotide binding | Yes |
| GO:0016491 | oxidoreductase activity | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005488 | binding | No |
| GO:0036094 | small molecule binding | No |
| GO:0043168 | anion binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0043167 | ion binding | No |
| GO:0000166 | nucleotide binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|480 MERHKEAVGRIAAAVRGFFERKESFRIFHGSTNSTRPRPNTRVVDISALSHVVAVDRSARTALVEPNVPMDKLVE ATLREGLVPPVVMEFPGITAGGGFAGTAGESSSFRHGFFSDTVDSVEMVLGNGDVVSASPAERADLFGAAAGAVG SLGITTMMRLRLVEAKRWVRTTYYRTSSVAEAIARVRAETQDPANDYVDGIIFSERHGTVITGRMTDDRPEDCPP QTFSGARDPWFYLHAEARTAAQPEATDYIPLAEYLFRYDRGGFWVGTQGWTYFKCLPFNRFTRWLLDDFMHTRML YRALHASGESARFIIQDLTLPYAKAEEFIHYTTRQFAIWPLWLCPLKQTPPPTFHPFTGETDPASAKPSDMLNVG LWGWGPDDHETFIAKNRALEDELVRLGGRKILYAHTYYTQDEFWRVYNQHSDTRAWYEALREKYHATTLPTVYEK VRIDIDAARRDCAKWRASFTGRRPIPGLYGVYKSIQSGDYGLHRNAGWKFKE* |
| Coding | >OphauB2|480 ATGGAGCGCCACAAAGAGGCCGTCGGCAGGATCGCGGCGGCGGTGCGCGGCTTCTTTGAGCGCAAGGAGTCGTTT CGCATCTTCCACGGCAGCACCAACAGCACCCGGCCACGGCCCAATACACGCGTCGTCGACATTAGCGCCCTGTCG CACGTGGTGGCTGTGGATCGCAGCGCGCGTACCGCCCTGGTTGAGCCCAACGTGCCCATGGACAAGCTGGTCGAG GCGACGCTGCGCGAGGGCCTGGTGCCGCCTGTTGTCATGGAGTTTCCCGGTATTACAGCTGGCGGCGGCTTCGCG GGCACTGCGGGCGAGAGCTCGTCCTTTCGGCACGGCTTCTTCAGCGATACCGTCGATTCCGTTGAAATGGTGCTG GGCAACGGCGACGTCGTCTCGGCCTCGCCTGCTGAGCGCGCCGACTTGTTTGGTGCTGCTGCGGGCGCTGTCGGC AGCCTGGGCATTACTACCATGATGCGGCTCCGTCTGGTCGAGGCCAAGCGCTGGGTGCGCACCACTTACTACCGC ACGTCGAGCGTTGCCGAGGCTATAGCCCGCGTTCGCGCCGAGACGCAGGACCCGGCCAATGACTATGTCGACGGC ATCATCTTCTCGGAGCGCCATGGCACCGTCATTACCGGCCGCATGACGGACGACCGCCCCGAAGACTGTCCGCCG CAGACGTTTAGCGGCGCTCGCGACCCCTGGTTCTATCTCCACGCCGAGGCGCGCACAGCCGCCCAGCCCGAGGCC ACCGACTACATTCCCCTTGCCGAGTATCTCTTCCGCTACGACCGCGGCGGCTTCTGGGTCGGCACCCAGGGCTGG ACCTACTTCAAGTGCCTGCCCTTTAACCGCTTCACTCGCTGGCTGCTCGACGACTTTATGCACACGCGCATGCTC TACCGCGCCCTCCACGCCAGCGGCGAGTCGGCCCGCTTCATCATCCAGGACCTGACCTTGCCCTACGCCAAGGCT GAAGAGTTTATCCACTACACCACCCGCCAGTTTGCCATTTGGCCTCTCTGGCTGTGCCCCCTCAAGCAGACGCCG CCGCCCACCTTTCACCCTTTTACTGGAGAGACGGATCCGGCCTCGGCCAAGCCCAGCGACATGCTCAACGTTGGC CTCTGGGGCTGGGGGCCCGACGACCACGAGACCTTTATTGCCAAGAACCGCGCGCTCGAGGACGAGCTGGTGCGC CTGGGCGGCCGCAAAATCCTCTACGCCCACACCTACTACACCCAAGACGAGTTTTGGCGCGTCTACAACCAGCAC TCGGACACTAGGGCCTGGTACGAGGCGCTGCGGGAAAAGTACCACGCCACCACGCTGCCCACTGTTTACGAAAAG GTGCGCATCGACATTGACGCTGCCCGCCGTGACTGCGCCAAGTGGCGCGCCTCGTTTACGGGCAGGCGGCCCATT CCCGGCCTGTACGGGGTATACAAGAGCATCCAGAGCGGCGACTATGGCCTCCACCGCAATGCCGGGTGGAAGTTT AAGGAGTAG |
| Transcript | >OphauB2|480 ATGGAGCGCCACAAAGAGGCCGTCGGCAGGATCGCGGCGGCGGTGCGCGGCTTCTTTGAGCGCAAGGAGTCGTTT CGCATCTTCCACGGCAGCACCAACAGCACCCGGCCACGGCCCAATACACGCGTCGTCGACATTAGCGCCCTGTCG CACGTGGTGGCTGTGGATCGCAGCGCGCGTACCGCCCTGGTTGAGCCCAACGTGCCCATGGACAAGCTGGTCGAG GCGACGCTGCGCGAGGGCCTGGTGCCGCCTGTTGTCATGGAGTTTCCCGGTATTACAGCTGGCGGCGGCTTCGCG GGCACTGCGGGCGAGAGCTCGTCCTTTCGGCACGGCTTCTTCAGCGATACCGTCGATTCCGTTGAAATGGTGCTG GGCAACGGCGACGTCGTCTCGGCCTCGCCTGCTGAGCGCGCCGACTTGTTTGGTGCTGCTGCGGGCGCTGTCGGC AGCCTGGGCATTACTACCATGATGCGGCTCCGTCTGGTCGAGGCCAAGCGCTGGGTGCGCACCACTTACTACCGC ACGTCGAGCGTTGCCGAGGCTATAGCCCGCGTTCGCGCCGAGACGCAGGACCCGGCCAATGACTATGTCGACGGC ATCATCTTCTCGGAGCGCCATGGCACCGTCATTACCGGCCGCATGACGGACGACCGCCCCGAAGACTGTCCGCCG CAGACGTTTAGCGGCGCTCGCGACCCCTGGTTCTATCTCCACGCCGAGGCGCGCACAGCCGCCCAGCCCGAGGCC ACCGACTACATTCCCCTTGCCGAGTATCTCTTCCGCTACGACCGCGGCGGCTTCTGGGTCGGCACCCAGGGCTGG ACCTACTTCAAGTGCCTGCCCTTTAACCGCTTCACTCGCTGGCTGCTCGACGACTTTATGCACACGCGCATGCTC TACCGCGCCCTCCACGCCAGCGGCGAGTCGGCCCGCTTCATCATCCAGGACCTGACCTTGCCCTACGCCAAGGCT GAAGAGTTTATCCACTACACCACCCGCCAGTTTGCCATTTGGCCTCTCTGGCTGTGCCCCCTCAAGCAGACGCCG CCGCCCACCTTTCACCCTTTTACTGGAGAGACGGATCCGGCCTCGGCCAAGCCCAGCGACATGCTCAACGTTGGC CTCTGGGGCTGGGGGCCCGACGACCACGAGACCTTTATTGCCAAGAACCGCGCGCTCGAGGACGAGCTGGTGCGC CTGGGCGGCCGCAAAATCCTCTACGCCCACACCTACTACACCCAAGACGAGTTTTGGCGCGTCTACAACCAGCAC TCGGACACTAGGGCCTGGTACGAGGCGCTGCGGGAAAAGTACCACGCCACCACGCTGCCCACTGTTTACGAAAAG GTGCGCATCGACATTGACGCTGCCCGCCGTGACTGCGCCAAGTGGCGCGCCTCGTTTACGGGCAGGCGGCCCATT CCCGGCCTGTACGGGGTATACAAGAGCATCCAGAGCGGCGACTATGGCCTCCACCGCAATGCCGGGTGGAAGTTT AAGGAGTAG |
| Gene | >OphauB2|480 ATGGAGCGCCACAAAGAGGCCGTCGGCAGGATCGCGGCGGCGGTGCGCGGCTTCTTTGAGCGCAAGGAGTCGTTT CGCATCTTCCACGGCAGCACCAACAGCACCCGGCCACGGCCCAATACACGCGTCGTCGACATTAGCGCCCTGTCG CACGTGGTGGCTGTGGATCGCAGCGCGCGTACCGCCCTGGTTGAGCCCAACGTGCCCATGGACAAGCTGGTCGAG GCGACGCTGCGCGAGGGCCTGGTGCCGCCTGTTGTCATGGAGTTTCCCGGTATTACAGCTGGCGGCGGCTTCGCG GGCACTGCGGGCGAGAGCTCGTCCTTTCGGCACGGCTTCTTCAGCGATACCGTCGATTCCGTTGAAATGGTGCTG GGCAACGGCGACGTCGTCTCGGCCTCGCCTGCTGAGCGCGCCGACTTGTTTGGTGCTGCTGCGGGCGCTGTCGGC AGCCTGGGCATTACTACCATGATGCGGCTCCGTCTGGTCGAGGCCAAGCGCTGGGTGCGCACCACTTACTACCGC ACGTCGAGCGTTGCCGAGGCTATAGCCCGCGTTCGCGCCGAGACGCAGGACCCGGCCAATGACTATGTCGACGGC ATCATCTTCTCGGAGCGCCATGGCACCGTCATTACCGGCCGCATGACGGACGACCGCCCCGAAGACTGTCCGCCG CAGACGTTTAGCGGCGCTCGCGACCCCTGGTTCTATCTCCACGCCGAGGCGCGCACAGCCGCCCAGCCCGAGGCC ACCGACTACATTCCCCTTGCCGAGTATCTCTTCCGCTACGACCGCGGCGGCTTCTGGGTCGGCACCCAGGGCTGG ACCTACTTCAAGTGCCTGCCCTTTAACCGCTTCACTCGCTGGCTGCTCGACGACTTTATGCACACGCGCATGCTC TACCGCGCCCTCCACGCCAGCGGCGAGTCGGCCCGCTTCATCATCCAGGACCTGACCTTGCCCTACGCCAAGGCT GAAGAGTTTATCCACTACACCACCCGCCAGTTTGCCATTTGGCCTCTCTGGCTGTGCCCCCTCAAGCAGACGCCG CCGCCCACCTTTCACCCTTTTACTGGAGAGACGGATCCGGCCTCGGCCAAGCCCAGCGACATGCTCAACGTTGGC CTCTGGGGCTGGGGGCCCGACGACCACGAGACCTTTATTGCCAAGAACCGCGCGCTCGAGGACGAGCTGGTGCGC CTGGGCGGCCGCAAAATCCTCTACGCCCACACCTACTACACCCAAGACGAGTTTTGGCGCGTCTACAACCAGCAC TCGGACACTAGGGCCTGGTACGAGGCGCTGCGGGAAAAGTACCACGCCACCACGCTGCCCACTGTTTACGAAAAG GTGCGCATCGACATTGACGCTGCCCGCCGTGACTGCGCCAAGTGGCGCGCCTCGTTTACGGGCAGGCGGCCCATT CCCGGCCTGTACGGGGTATACAAGAGCATCCAGAGCGGCGACTATGGCCTCCACCGCAATGCCGGGTGGAAGTTT AAGGAGTAG |