© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | OphauB2|48 |
| Gene name | |
| Location | Contig_1:112335..113759 |
| Strand | + |
| Gene length (bp) | 1424 |
| Transcript length (bp) | 1368 |
| Coding sequence length (bp) | 1368 |
| Protein length (aa) | 456 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00190 | Cupin_1 | Cupin | 7.3E-18 | 125 | 256 |
| PF00190 | Cupin_1 | Cupin | 4.8E-19 | 300 | 411 |
| PF07883 | Cupin_2 | Cupin domain | 6.0E-11 | 150 | 222 |
| PF07883 | Cupin_2 | Cupin domain | 1.7E-13 | 330 | 403 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O34714|OXDC_BACSU | Oxalate decarboxylase OxdC OS=Bacillus subtilis (strain 168) GN=oxdC PE=1 SV=1 | 74 | 432 | 2.0E-151 |
| sp|O34767|OXDD_BACSU | Oxalate decarboxylase OxdD OS=Bacillus subtilis (strain 168) GN=oxdD PE=1 SV=1 | 74 | 434 | 5.0E-132 |
| sp|D4AKL6|OXDD_ARTBC | Probable oxalate decarboxylase ARB_04859 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_04859 PE=1 SV=1 | 78 | 424 | 8.0E-90 |
| sp|D4B179|OXDC_ARTBC | Oxalate decarboxylase ARB_02208 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02208 PE=1 SV=1 | 78 | 424 | 2.0E-85 |
| sp|O34767|OXDD_BACSU | Oxalate decarboxylase OxdD OS=Bacillus subtilis (strain 168) GN=oxdD PE=1 SV=1 | 128 | 265 | 2.0E-15 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O34714|OXDC_BACSU | Oxalate decarboxylase OxdC OS=Bacillus subtilis (strain 168) GN=oxdC PE=1 SV=1 | 74 | 432 | 2.0E-151 |
| sp|O34767|OXDD_BACSU | Oxalate decarboxylase OxdD OS=Bacillus subtilis (strain 168) GN=oxdD PE=1 SV=1 | 74 | 434 | 5.0E-132 |
| sp|D4AKL6|OXDD_ARTBC | Probable oxalate decarboxylase ARB_04859 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_04859 PE=1 SV=1 | 78 | 424 | 8.0E-90 |
| sp|D4B179|OXDC_ARTBC | Oxalate decarboxylase ARB_02208 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02208 PE=1 SV=1 | 78 | 424 | 2.0E-85 |
| sp|O34767|OXDD_BACSU | Oxalate decarboxylase OxdD OS=Bacillus subtilis (strain 168) GN=oxdD PE=1 SV=1 | 128 | 265 | 2.0E-15 |
| sp|D4B179|OXDC_ARTBC | Oxalate decarboxylase ARB_02208 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02208 PE=1 SV=1 | 123 | 270 | 2.0E-13 |
| sp|D4AKL6|OXDD_ARTBC | Probable oxalate decarboxylase ARB_04859 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_04859 PE=1 SV=1 | 113 | 268 | 3.0E-11 |
| sp|Q6I544|GL52_ORYSJ | Germin-like protein 5-1 OS=Oryza sativa subsp. japonica GN=Os05g0277500 PE=2 SV=1 | 325 | 449 | 5.0E-07 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 21 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|48 MKLVQKLSQYQLLLAGLCSGLPHSDSPRQRLLNGLPLQAKFGRAHDAAEQNPYTPSFRDPYDNKVDAIRLDVDPL PWRNGHGASVLGPYNRERSRQSPDLIRPPSTDHGDVQNMRWSFTDSHVRIEEGGWTRQTTLRELPSSVELAGVNM RLGPSVIRELHWHKEAEWAYVLAGEVRVTALDYEGGSFFDDLKKGDLWYFPSGVPHSLQGLGDNGTEFLLIFDDG RFSEESTFLLTDWLAHTPKSVIAENFNLAPQVFDHLPKSEKYIFQGSQPGSLDEERPKGKGVKKSAYNFTHRMLD QEPKKTSGGQVRITDSTNFAISKTVAAAHLVIEPGALREMHWHPNADEWSFFISGRARVTVFAAEGKARTFDYMA GDVGIVPRNMGHFVENIGDEPVEMLEIFRADQFRDFSLFQWMGETPQRMVLDHLFAGDAKAGQEFLAKIEDAKKD EIRSY* |
| Coding | >OphauB2|48 ATGAAGCTCGTCCAGAAGCTCTCGCAGTACCAGCTGCTGCTCGCCGGACTCTGCTCCGGATTGCCTCACTCCGAC AGCCCGCGCCAACGGCTGCTCAACGGCCTACCGCTGCAGGCCAAATTCGGCAGAGCCCACGACGCGGCCGAGCAA AATCCCTACACGCCCAGCTTCCGCGACCCCTACGACAACAAGGTGGATGCCATCCGGCTCGACGTCGATCCTCTG CCCTGGCGCAATGGTCACGGCGCCTCGGTGCTGGGCCCCTACAACCGCGAGCGCTCGCGCCAGAGCCCCGACCTC ATCCGGCCGCCCAGCACGGACCATGGCGACGTGCAAAACATGCGCTGGAGCTTCACTGACTCGCACGTGCGCATT GAAGAAGGCGGCTGGACGCGCCAGACGACGCTGCGCGAGCTGCCATCGAGCGTCGAGCTGGCGGGCGTCAACATG CGTCTCGGCCCCTCTGTCATTCGCGAGCTGCACTGGCACAAGGAGGCCGAATGGGCCTATGTGCTCGCCGGCGAG GTGCGCGTCACGGCCCTCGACTACGAGGGCGGCAGCTTCTTTGACGACTTGAAAAAGGGCGACTTGTGGTACTTC CCCAGCGGCGTCCCGCACTCCCTGCAGGGCCTGGGCGACAACGGCACCGAGTTCCTCCTCATCTTTGACGACGGC CGCTTCTCCGAGGAGTCGACCTTTTTGCTGACTGACTGGTTGGCCCACACGCCCAAATCCGTCATTGCCGAAAAC TTCAACCTGGCCCCCCAAGTCTTTGACCACTTGCCCAAGAGCGAAAAGTACATCTTCCAAGGCTCCCAGCCCGGC TCCCTTGACGAGGAGCGGCCCAAGGGCAAGGGCGTCAAAAAGTCGGCCTACAACTTCACGCACCGCATGCTCGAC CAGGAGCCCAAGAAGACGAGCGGCGGCCAGGTGCGCATCACCGACTCGACCAACTTTGCCATCTCAAAGACGGTG GCAGCCGCCCATCTCGTCATTGAGCCCGGTGCGCTACGCGAAATGCACTGGCACCCCAATGCCGACGAATGGTCC TTTTTCATCAGCGGCCGTGCCCGCGTCACCGTCTTTGCCGCCGAGGGCAAGGCGCGCACCTTTGACTACATGGCG GGCGACGTGGGCATCGTTCCCAGGAACATGGGCCACTTTGTCGAGAACATTGGCGACGAACCCGTCGAGATGCTC GAGATTTTTCGCGCCGACCAGTTCCGCGACTTTTCCCTCTTCCAGTGGATGGGCGAGACGCCCCAGCGCATGGTC CTTGACCATCTCTTTGCCGGCGATGCCAAGGCTGGCCAGGAATTCTTGGCTAAGATTGAGGATGCCAAAAAGGAT GAGATACGGAGCTACTAA |
| Transcript | >OphauB2|48 ATGAAGCTCGTCCAGAAGCTCTCGCAGTACCAGCTGCTGCTCGCCGGACTCTGCTCCGGATTGCCTCACTCCGAC AGCCCGCGCCAACGGCTGCTCAACGGCCTACCGCTGCAGGCCAAATTCGGCAGAGCCCACGACGCGGCCGAGCAA AATCCCTACACGCCCAGCTTCCGCGACCCCTACGACAACAAGGTGGATGCCATCCGGCTCGACGTCGATCCTCTG CCCTGGCGCAATGGTCACGGCGCCTCGGTGCTGGGCCCCTACAACCGCGAGCGCTCGCGCCAGAGCCCCGACCTC ATCCGGCCGCCCAGCACGGACCATGGCGACGTGCAAAACATGCGCTGGAGCTTCACTGACTCGCACGTGCGCATT GAAGAAGGCGGCTGGACGCGCCAGACGACGCTGCGCGAGCTGCCATCGAGCGTCGAGCTGGCGGGCGTCAACATG CGTCTCGGCCCCTCTGTCATTCGCGAGCTGCACTGGCACAAGGAGGCCGAATGGGCCTATGTGCTCGCCGGCGAG GTGCGCGTCACGGCCCTCGACTACGAGGGCGGCAGCTTCTTTGACGACTTGAAAAAGGGCGACTTGTGGTACTTC CCCAGCGGCGTCCCGCACTCCCTGCAGGGCCTGGGCGACAACGGCACCGAGTTCCTCCTCATCTTTGACGACGGC CGCTTCTCCGAGGAGTCGACCTTTTTGCTGACTGACTGGTTGGCCCACACGCCCAAATCCGTCATTGCCGAAAAC TTCAACCTGGCCCCCCAAGTCTTTGACCACTTGCCCAAGAGCGAAAAGTACATCTTCCAAGGCTCCCAGCCCGGC TCCCTTGACGAGGAGCGGCCCAAGGGCAAGGGCGTCAAAAAGTCGGCCTACAACTTCACGCACCGCATGCTCGAC CAGGAGCCCAAGAAGACGAGCGGCGGCCAGGTGCGCATCACCGACTCGACCAACTTTGCCATCTCAAAGACGGTG GCAGCCGCCCATCTCGTCATTGAGCCCGGTGCGCTACGCGAAATGCACTGGCACCCCAATGCCGACGAATGGTCC TTTTTCATCAGCGGCCGTGCCCGCGTCACCGTCTTTGCCGCCGAGGGCAAGGCGCGCACCTTTGACTACATGGCG GGCGACGTGGGCATCGTTCCCAGGAACATGGGCCACTTTGTCGAGAACATTGGCGACGAACCCGTCGAGATGCTC GAGATTTTTCGCGCCGACCAGTTCCGCGACTTTTCCCTCTTCCAGTGGATGGGCGAGACGCCCCAGCGCATGGTC CTTGACCATCTCTTTGCCGGCGATGCCAAGGCTGGCCAGGAATTCTTGGCTAAGATTGAGGATGCCAAAAAGGAT GAGATACGGAGCTACTAA |
| Gene | >OphauB2|48 ATGAAGCTCGTCCAGAAGCTCTCGCAGTACCAGCTGCTGCTCGCCGGACTCTGCTCCGGATTGCCTCACTCCGAC AGCCCGCGCCAACGGCTGCTCAACGGCCTACCGCTGCAGGCCAAATTCGGCAGAGCCCACGACGCGGCCGAGCAA AATCCCTACACGCCCAGCTTCCGCGACCCCTACGACAACAAGGTGGATGCCATCCGGCTCGACGTCGATCCTCTG CCCTGGCGCAATGGTCACGGCGCCTCGGTGCTGGGCCCCTACAACCGCGAGCGCTCGCGCCAGAGCCCCGACCTC ATCCGGCCGCCCAGCACGGACCATGGCGACGTGCAAAACATGCGCTGGAGCTTCACTGACTCGCACGTGCGCATT GAAGAAGGCGGCTGGACGCGCCAGACGACGCTGCGCGAGCTGCCATCGAGCGTCGAGCTGGCGGGCGTCAACATG CGTCTCGGCCCCTCTGTCATTCGCGAGCTGCACTGGCACAAGGAGGCCGAATGGGCCTATGTGCTCGCCGGCGAG GTGCGCGTCACGGCCCTCGACTACGAGGGCGGCAGCTTCTTTGACGACTTGAAAAAGGGCGACTTGTGGTACTTC CCCAGCGGCGTCCCGCACTCCCTGCAGGGCCTGGGCGACAACGGCACCGAGTTCCTCCTCATCTTTGACGACGGC CGCTTCTCCGAGGAGTCGACCTTTTTGCTGACTGACTGGTTGGGTGAGTGCCTCTGCTGCTGGCTGCTTGTCGCC CTGCCACTGACGATGCTCGTCCAGCCCACACGCCCAAATCCGTCATTGCCGAAAACTTCAACCTGGCCCCCCAAG TCTTTGACCACTTGCCCAAGAGCGAAAAGTACATCTTCCAAGGCTCCCAGCCCGGCTCCCTTGACGAGGAGCGGC CCAAGGGCAAGGGCGTCAAAAAGTCGGCCTACAACTTCACGCACCGCATGCTCGACCAGGAGCCCAAGAAGACGA GCGGCGGCCAGGTGCGCATCACCGACTCGACCAACTTTGCCATCTCAAAGACGGTGGCAGCCGCCCATCTCGTCA TTGAGCCCGGTGCGCTACGCGAAATGCACTGGCACCCCAATGCCGACGAATGGTCCTTTTTCATCAGCGGCCGTG CCCGCGTCACCGTCTTTGCCGCCGAGGGCAAGGCGCGCACCTTTGACTACATGGCGGGCGACGTGGGCATCGTTC CCAGGAACATGGGCCACTTTGTCGAGAACATTGGCGACGAACCCGTCGAGATGCTCGAGATTTTTCGCGCCGACC AGTTCCGCGACTTTTCCCTCTTCCAGTGGATGGGCGAGACGCCCCAGCGCATGGTCCTTGACCATCTCTTTGCCG GCGATGCCAAGGCTGGCCAGGAATTCTTGGCTAAGATTGAGGATGCCAAAAAGGATGAGATACGGAGCTACTAA |