Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|4749
Gene name
LocationContig_33:3530..4931
Strand-
Gene length (bp)1401
Transcript length (bp)1401
Coding sequence length (bp)1401
Protein length (aa) 467

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13668 Ferritin_2 Ferritin-like domain 3.1E-17 120 251

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P53693|RDS1_SCHPO Protein rds1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rds1 PE=2 SV=2 86 459 7.0E-129

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 23 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|4749
MARRAGLAAIVALALRGHHGLCTPISDSLPGALATQQPVAPVVPVENVVSHGPYTGPPPCTTGAQSTAIAAQSVA
ALPPDQKKLAYPADGQLHAQQPAPFTPHGGLGTDGSEPVYRVQSDFDYQSIALALYQEWIELDLFHWGLARFSKA
DFEEAGLTAEDRFLLEFMANQEVGHATALTNMLGPQAPRQCSYNYPVSTVREYIDFCQKLTRWGEAGVYGFLNHL
DAREVGQILLQSITTEARQQMVFRQFQGLFPMPVWFEVGIPQSWAWSLLAPYISSCPAGQRQLIWQNIPALRILN
QPNPARIHGEAAEGEITGGYANTLNSKNISPDDDCSATAEVGKSCKPGITRNRTQPLSYAGRRVHLEWHEPGMAI
GPNNSYITSTTAAQPRFAAWVTQLNVTYSPLQDVEGCSAWTVQPDTSTYQGDPAINGTVFLVLTDKDVAVSPFNL
TMLNPHVAAIGMYQAG*
Coding >OphauB2|4749
ATGGCTCGACGTGCTGGCCTCGCAGCCATTGTTGCCCTTGCTCTCCGCGGACACCATGGCCTTTGCACTCCCATA
TCAGACAGCCTCCCCGGTGCCCTTGCCACTCAACAGCCCGTAGCTCCCGTCGTGCCCGTTGAAAATGTTGTTTCG
CACGGCCCATATACCGGCCCTCCCCCTTGCACCACTGGAGCTCAATCAACCGCCATTGCCGCCCAGTCTGTTGCC
GCCCTGCCCCCTGATCAAAAGAAGCTTGCCTACCCAGCCGACGGCCAGCTGCACGCGCAACAGCCCGCGCCCTTT
ACCCCCCATGGCGGCCTGGGCACCGACGGCTCCGAGCCCGTGTACCGCGTGCAGAGCGATTTTGACTATCAATCG
ATTGCTCTGGCGCTCTACCAGGAATGGATCGAGCTCGACCTCTTCCACTGGGGCCTGGCGCGCTTCTCCAAGGCC
GACTTTGAAGAAGCAGGCTTGACGGCTGAGGACCGCTTTCTCCTCGAATTCATGGCTAATCAGGAGGTCGGCCAC
GCCACCGCCCTGACAAACATGCTCGGGCCGCAAGCACCGCGGCAGTGCAGCTACAACTATCCCGTCTCGACGGTG
CGCGAATACATTGACTTTTGCCAAAAGCTGACGCGCTGGGGCGAGGCGGGCGTCTACGGCTTCCTTAACCATCTC
GACGCCCGCGAGGTGGGCCAGATTCTGCTGCAGTCCATCACCACTGAAGCGCGGCAGCAAATGGTTTTTCGGCAG
TTCCAGGGCCTCTTTCCCATGCCCGTGTGGTTCGAGGTTGGCATCCCGCAGTCTTGGGCCTGGTCGCTGCTCGCA
CCGTATATTTCGTCGTGCCCTGCTGGCCAGAGGCAGCTCATTTGGCAAAACATTCCTGCTCTTCGCATCCTCAAC
CAGCCCAATCCGGCTCGCATCCACGGCGAGGCTGCCGAGGGGGAAATCACGGGAGGATATGCAAATACGCTAAAC
TCCAAAAACATTTCTCCAGACGACGACTGCTCTGCCACTGCAGAGGTGGGCAAGAGCTGTAAACCAGGCATCACG
CGCAACCGCACCCAGCCTCTTTCCTACGCGGGCCGCCGCGTCCATCTCGAGTGGCATGAGCCCGGCATGGCGATT
GGGCCGAATAACAGCTACATCACTTCCACCACGGCCGCACAGCCCCGGTTTGCGGCGTGGGTGACGCAGCTCAAT
GTCACGTACTCGCCGCTGCAAGACGTTGAGGGGTGCAGCGCCTGGACGGTCCAGCCAGACACGTCGACCTACCAG
GGCGACCCGGCCATCAACGGCACCGTCTTTTTGGTCCTGACGGATAAAGACGTTGCCGTGTCGCCGTTTAATCTG
ACCATGTTGAATCCGCATGTTGCTGCCATTGGCATGTATCAGGCGGGATGA
Transcript >OphauB2|4749
ATGGCTCGACGTGCTGGCCTCGCAGCCATTGTTGCCCTTGCTCTCCGCGGACACCATGGCCTTTGCACTCCCATA
TCAGACAGCCTCCCCGGTGCCCTTGCCACTCAACAGCCCGTAGCTCCCGTCGTGCCCGTTGAAAATGTTGTTTCG
CACGGCCCATATACCGGCCCTCCCCCTTGCACCACTGGAGCTCAATCAACCGCCATTGCCGCCCAGTCTGTTGCC
GCCCTGCCCCCTGATCAAAAGAAGCTTGCCTACCCAGCCGACGGCCAGCTGCACGCGCAACAGCCCGCGCCCTTT
ACCCCCCATGGCGGCCTGGGCACCGACGGCTCCGAGCCCGTGTACCGCGTGCAGAGCGATTTTGACTATCAATCG
ATTGCTCTGGCGCTCTACCAGGAATGGATCGAGCTCGACCTCTTCCACTGGGGCCTGGCGCGCTTCTCCAAGGCC
GACTTTGAAGAAGCAGGCTTGACGGCTGAGGACCGCTTTCTCCTCGAATTCATGGCTAATCAGGAGGTCGGCCAC
GCCACCGCCCTGACAAACATGCTCGGGCCGCAAGCACCGCGGCAGTGCAGCTACAACTATCCCGTCTCGACGGTG
CGCGAATACATTGACTTTTGCCAAAAGCTGACGCGCTGGGGCGAGGCGGGCGTCTACGGCTTCCTTAACCATCTC
GACGCCCGCGAGGTGGGCCAGATTCTGCTGCAGTCCATCACCACTGAAGCGCGGCAGCAAATGGTTTTTCGGCAG
TTCCAGGGCCTCTTTCCCATGCCCGTGTGGTTCGAGGTTGGCATCCCGCAGTCTTGGGCCTGGTCGCTGCTCGCA
CCGTATATTTCGTCGTGCCCTGCTGGCCAGAGGCAGCTCATTTGGCAAAACATTCCTGCTCTTCGCATCCTCAAC
CAGCCCAATCCGGCTCGCATCCACGGCGAGGCTGCCGAGGGGGAAATCACGGGAGGATATGCAAATACGCTAAAC
TCCAAAAACATTTCTCCAGACGACGACTGCTCTGCCACTGCAGAGGTGGGCAAGAGCTGTAAACCAGGCATCACG
CGCAACCGCACCCAGCCTCTTTCCTACGCGGGCCGCCGCGTCCATCTCGAGTGGCATGAGCCCGGCATGGCGATT
GGGCCGAATAACAGCTACATCACTTCCACCACGGCCGCACAGCCCCGGTTTGCGGCGTGGGTGACGCAGCTCAAT
GTCACGTACTCGCCGCTGCAAGACGTTGAGGGGTGCAGCGCCTGGACGGTCCAGCCAGACACGTCGACCTACCAG
GGCGACCCGGCCATCAACGGCACCGTCTTTTTGGTCCTGACGGATAAAGACGTTGCCGTGTCGCCGTTTAATCTG
ACCATGTTGAATCCGCATGTTGCTGCCATTGGCATGTATCAGGCGGGATGA
Gene >OphauB2|4749
ATGGCTCGACGTGCTGGCCTCGCAGCCATTGTTGCCCTTGCTCTCCGCGGACACCATGGCCTTTGCACTCCCATA
TCAGACAGCCTCCCCGGTGCCCTTGCCACTCAACAGCCCGTAGCTCCCGTCGTGCCCGTTGAAAATGTTGTTTCG
CACGGCCCATATACCGGCCCTCCCCCTTGCACCACTGGAGCTCAATCAACCGCCATTGCCGCCCAGTCTGTTGCC
GCCCTGCCCCCTGATCAAAAGAAGCTTGCCTACCCAGCCGACGGCCAGCTGCACGCGCAACAGCCCGCGCCCTTT
ACCCCCCATGGCGGCCTGGGCACCGACGGCTCCGAGCCCGTGTACCGCGTGCAGAGCGATTTTGACTATCAATCG
ATTGCTCTGGCGCTCTACCAGGAATGGATCGAGCTCGACCTCTTCCACTGGGGCCTGGCGCGCTTCTCCAAGGCC
GACTTTGAAGAAGCAGGCTTGACGGCTGAGGACCGCTTTCTCCTCGAATTCATGGCTAATCAGGAGGTCGGCCAC
GCCACCGCCCTGACAAACATGCTCGGGCCGCAAGCACCGCGGCAGTGCAGCTACAACTATCCCGTCTCGACGGTG
CGCGAATACATTGACTTTTGCCAAAAGCTGACGCGCTGGGGCGAGGCGGGCGTCTACGGCTTCCTTAACCATCTC
GACGCCCGCGAGGTGGGCCAGATTCTGCTGCAGTCCATCACCACTGAAGCGCGGCAGCAAATGGTTTTTCGGCAG
TTCCAGGGCCTCTTTCCCATGCCCGTGTGGTTCGAGGTTGGCATCCCGCAGTCTTGGGCCTGGTCGCTGCTCGCA
CCGTATATTTCGTCGTGCCCTGCTGGCCAGAGGCAGCTCATTTGGCAAAACATTCCTGCTCTTCGCATCCTCAAC
CAGCCCAATCCGGCTCGCATCCACGGCGAGGCTGCCGAGGGGGAAATCACGGGAGGATATGCAAATACGCTAAAC
TCCAAAAACATTTCTCCAGACGACGACTGCTCTGCCACTGCAGAGGTGGGCAAGAGCTGTAAACCAGGCATCACG
CGCAACCGCACCCAGCCTCTTTCCTACGCGGGCCGCCGCGTCCATCTCGAGTGGCATGAGCCCGGCATGGCGATT
GGGCCGAATAACAGCTACATCACTTCCACCACGGCCGCACAGCCCCGGTTTGCGGCGTGGGTGACGCAGCTCAAT
GTCACGTACTCGCCGCTGCAAGACGTTGAGGGGTGCAGCGCCTGGACGGTCCAGCCAGACACGTCGACCTACCAG
GGCGACCCGGCCATCAACGGCACCGTCTTTTTGGTCCTGACGGATAAAGACGTTGCCGTGTCGCCGTTTAATCTG
ACCATGTTGAATCCGCATGTTGCTGCCATTGGCATGTATCAGGCGGGATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail