Protein ID | OphauB2|4735 |
Gene name | |
Location | Contig_323:3259..5787 |
Strand | - |
Gene length (bp) | 2528 |
Transcript length (bp) | 2406 |
Coding sequence length (bp) | 2406 |
Protein length (aa) | 802 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF08314 | Sec39 | Secretory pathway protein Sec39 | 2.1E-186 | 2 | 683 |
GO Term | Description | Terminal node |
---|---|---|
GO:0006890 | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | Yes |
GO:0016192 | vesicle-mediated transport | No |
GO:0051179 | localization | No |
GO:0008150 | biological_process | No |
GO:0051234 | establishment of localization | No |
GO:0048193 | Golgi vesicle transport | No |
GO:0006810 | transport | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 12 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauB2|4735 MDALSDLQAAERARRLHLAPLDSPHAPANDPLSVFLYLRSCNIDTETGMLAHLPQLLMPFLHHSESLRVWILATV LPYVRRNADYYPEAAPAYGLLAFQRLPGPEAVSHLVSKTSSSSLGRDLDGLVLPWLGDDSRWLLTKEHVPVCPGW HKALDWLASHRLLTQSVSRWHGLDCLDQDTQLEPSKRHYLLQSFARAVIASVYTDPDSSVHHLTASYQTIVKLRS LLHHASDEPPLSETLSSLPCVPLVDKSASNEIKIMAATDLLASPCLALYPTPAATDLLKALTLSALVATRIGVSC SPKQAGHLALLQDEREQKTHMSKLFHALSSHASSHKDDYWLAARRHVLWLRDWGRQRHPHDKAVVKGPIATVARQ HIESEYLRVLLWTCHYSLAAHLYQDGNVYSLPLSAIRDTVYQSALSAFDHASKPDYTSGGLKHCHDIIRALPIAA NDSIPEFRRIEALLRATKTLGSYRLLLKEGELFSPVLLRVHSDPISLIDKVLEQNPQAYTRLQEFLETGLNMVRA GLPCRGRWELATHDAVLGAQDKERHMQAAEIRITAMCVEAALKENDFETAYSYVVNRLGAQTSLRDKPHEAFRDD WSWKAALQAGQYVRTAKSQKPTHLGTASGNPEIRHLEQRIDCLATALRAAPTCQLPGILKTFRRCEEQLDSAISD EATNEALWDAAANLTQLPGAFETHSPDVPTTMQPRNMSAATVAREADAAPMSLFDLSRATARVAQRNLTAISTLH EIATAEPLTAPQTSAPSRTRRRDQLKEAATGTLVSGVGWLIGANVGQDQSP* |
Coding | >OphauB2|4735 ATGGATGCCTTGTCGGACCTGCAGGCTGCTGAGCGCGCAAGACGCCTTCATCTGGCACCTCTTGACTCGCCCCAT GCTCCCGCCAATGACCCTCTCAGTGTCTTTCTCTACCTGAGAAGCTGCAACATTGACACAGAGACTGGCATGCTC GCCCATCTCCCGCAATTGCTCATGCCATTTCTTCACCACTCTGAATCTTTGCGAGTCTGGATTCTCGCCACAGTT CTGCCATACGTGCGCCGCAACGCAGACTACTACCCAGAAGCTGCTCCAGCCTACGGCTTGCTAGCCTTCCAGCGC TTACCCGGCCCCGAGGCCGTCTCTCATCTTGTCTCCAAGACAAGCTCCTCTAGCCTCGGACGCGACCTCGATGGC CTCGTCTTGCCCTGGCTTGGCGACGACTCTCGCTGGCTACTGACCAAGGAGCATGTGCCCGTCTGTCCCGGTTGG CACAAGGCCCTTGACTGGCTTGCCTCGCATCGCCTCTTGACCCAGTCTGTTAGTCGGTGGCACGGCCTTGATTGC CTCGACCAAGACACCCAGCTTGAACCCTCCAAGCGTCACTATCTGCTGCAGAGCTTTGCTCGGGCAGTCATTGCC TCTGTCTACACGGATCCCGATTCCTCTGTCCACCACCTCACCGCCTCATACCAGACAATAGTCAAGCTGCGTTCT CTTCTTCATCACGCGTCTGATGAGCCACCGCTATCGGAAACCTTGTCCTCCTTACCTTGTGTGCCCTTGGTCGAC AAGTCGGCCTCAAACGAGATCAAAATCATGGCGGCAACCGACTTGCTTGCCTCTCCTTGCCTCGCCTTGTACCCA ACACCAGCTGCCACTGACCTGCTCAAGGCCTTGACTCTTAGTGCTCTTGTTGCCACCCGTATTGGTGTCTCTTGT TCTCCCAAGCAAGCTGGTCACTTGGCCCTTCTGCAAGACGAGAGGGAGCAAAAGACGCACATGTCAAAGCTTTTT CATGCCTTGAGCTCTCATGCTTCAAGCCACAAGGATGACTATTGGCTGGCTGCTCGCCGCCATGTGCTCTGGCTA CGTGATTGGGGCCGCCAGCGCCACCCCCATGACAAGGCTGTTGTAAAGGGGCCCATTGCCACTGTTGCCAGGCAG CACATTGAAAGCGAATACCTCCGAGTCCTTCTTTGGACTTGTCACTACTCTCTGGCCGCACATCTTTACCAAGAT GGAAATGTCTATTCTCTACCATTATCAGCCATTCGTGATACTGTTTACCAATCAGCCTTGTCTGCTTTTGATCAT GCTTCCAAGCCGGATTACACGAGTGGCGGCTTGAAACATTGTCATGACATCATTCGCGCCTTGCCAATAGCAGCA AATGATTCAATTCCAGAATTCCGGCGCATAGAGGCTCTTCTCAGGGCCACAAAGACGCTTGGCAGCTATCGACTG CTTCTCAAGGAGGGCGAGCTCTTTAGCCCTGTGCTATTGCGAGTACATTCCGATCCCATCTCTCTTATCGACAAG GTTCTTGAGCAAAATCCACAAGCCTATACACGACTACAGGAATTCCTAGAAACAGGTCTTAACATGGTGCGTGCT GGCTTGCCGTGCCGTGGTAGGTGGGAACTGGCCACGCATGATGCAGTCCTCGGCGCTCAGGACAAGGAGAGGCAT ATGCAGGCTGCCGAAATACGCATCACTGCCATGTGTGTCGAGGCCGCCTTGAAAGAGAATGACTTTGAGACGGCC TATTCATACGTAGTAAACCGTCTTGGTGCACAAACATCATTGCGAGACAAGCCTCATGAGGCGTTTCGGGACGAT TGGTCGTGGAAGGCAGCCCTTCAAGCCGGACAGTATGTGCGAACCGCCAAGTCGCAAAAGCCTACGCATCTAGGC ACCGCAAGCGGAAACCCTGAGATTCGTCACTTGGAGCAGCGTATTGACTGCTTGGCCACAGCCCTGAGGGCCGCC CCCACTTGTCAGCTTCCAGGAATACTCAAGACCTTTCGCCGCTGCGAGGAGCAGCTCGACTCGGCAATCAGTGAC GAAGCGACCAACGAGGCTCTGTGGGATGCGGCAGCTAATCTCACTCAGCTGCCCGGCGCATTTGAAACCCACAGC CCAGACGTGCCGACCACCATGCAGCCCCGCAACATGTCGGCTGCGACTGTCGCTCGTGAGGCTGATGCCGCGCCC ATGTCATTGTTTGATCTTTCGAGGGCTACTGCTAGGGTGGCTCAGAGAAACCTGACAGCTATTTCCACGCTGCAC GAAATTGCTACCGCTGAGCCACTGACCGCTCCTCAGACCAGCGCGCCTTCGCGGACCAGAAGAAGAGACCAGCTC AAGGAAGCTGCCACAGGCACCTTGGTCTCCGGAGTCGGCTGGTTGATTGGTGCCAATGTAGGCCAAGACCAGTCT CCATAG |
Transcript | >OphauB2|4735 ATGGATGCCTTGTCGGACCTGCAGGCTGCTGAGCGCGCAAGACGCCTTCATCTGGCACCTCTTGACTCGCCCCAT GCTCCCGCCAATGACCCTCTCAGTGTCTTTCTCTACCTGAGAAGCTGCAACATTGACACAGAGACTGGCATGCTC GCCCATCTCCCGCAATTGCTCATGCCATTTCTTCACCACTCTGAATCTTTGCGAGTCTGGATTCTCGCCACAGTT CTGCCATACGTGCGCCGCAACGCAGACTACTACCCAGAAGCTGCTCCAGCCTACGGCTTGCTAGCCTTCCAGCGC TTACCCGGCCCCGAGGCCGTCTCTCATCTTGTCTCCAAGACAAGCTCCTCTAGCCTCGGACGCGACCTCGATGGC CTCGTCTTGCCCTGGCTTGGCGACGACTCTCGCTGGCTACTGACCAAGGAGCATGTGCCCGTCTGTCCCGGTTGG CACAAGGCCCTTGACTGGCTTGCCTCGCATCGCCTCTTGACCCAGTCTGTTAGTCGGTGGCACGGCCTTGATTGC CTCGACCAAGACACCCAGCTTGAACCCTCCAAGCGTCACTATCTGCTGCAGAGCTTTGCTCGGGCAGTCATTGCC TCTGTCTACACGGATCCCGATTCCTCTGTCCACCACCTCACCGCCTCATACCAGACAATAGTCAAGCTGCGTTCT CTTCTTCATCACGCGTCTGATGAGCCACCGCTATCGGAAACCTTGTCCTCCTTACCTTGTGTGCCCTTGGTCGAC AAGTCGGCCTCAAACGAGATCAAAATCATGGCGGCAACCGACTTGCTTGCCTCTCCTTGCCTCGCCTTGTACCCA ACACCAGCTGCCACTGACCTGCTCAAGGCCTTGACTCTTAGTGCTCTTGTTGCCACCCGTATTGGTGTCTCTTGT TCTCCCAAGCAAGCTGGTCACTTGGCCCTTCTGCAAGACGAGAGGGAGCAAAAGACGCACATGTCAAAGCTTTTT CATGCCTTGAGCTCTCATGCTTCAAGCCACAAGGATGACTATTGGCTGGCTGCTCGCCGCCATGTGCTCTGGCTA CGTGATTGGGGCCGCCAGCGCCACCCCCATGACAAGGCTGTTGTAAAGGGGCCCATTGCCACTGTTGCCAGGCAG CACATTGAAAGCGAATACCTCCGAGTCCTTCTTTGGACTTGTCACTACTCTCTGGCCGCACATCTTTACCAAGAT GGAAATGTCTATTCTCTACCATTATCAGCCATTCGTGATACTGTTTACCAATCAGCCTTGTCTGCTTTTGATCAT GCTTCCAAGCCGGATTACACGAGTGGCGGCTTGAAACATTGTCATGACATCATTCGCGCCTTGCCAATAGCAGCA AATGATTCAATTCCAGAATTCCGGCGCATAGAGGCTCTTCTCAGGGCCACAAAGACGCTTGGCAGCTATCGACTG CTTCTCAAGGAGGGCGAGCTCTTTAGCCCTGTGCTATTGCGAGTACATTCCGATCCCATCTCTCTTATCGACAAG GTTCTTGAGCAAAATCCACAAGCCTATACACGACTACAGGAATTCCTAGAAACAGGTCTTAACATGGTGCGTGCT GGCTTGCCGTGCCGTGGTAGGTGGGAACTGGCCACGCATGATGCAGTCCTCGGCGCTCAGGACAAGGAGAGGCAT ATGCAGGCTGCCGAAATACGCATCACTGCCATGTGTGTCGAGGCCGCCTTGAAAGAGAATGACTTTGAGACGGCC TATTCATACGTAGTAAACCGTCTTGGTGCACAAACATCATTGCGAGACAAGCCTCATGAGGCGTTTCGGGACGAT TGGTCGTGGAAGGCAGCCCTTCAAGCCGGACAGTATGTGCGAACCGCCAAGTCGCAAAAGCCTACGCATCTAGGC ACCGCAAGCGGAAACCCTGAGATTCGTCACTTGGAGCAGCGTATTGACTGCTTGGCCACAGCCCTGAGGGCCGCC CCCACTTGTCAGCTTCCAGGAATACTCAAGACCTTTCGCCGCTGCGAGGAGCAGCTCGACTCGGCAATCAGTGAC GAAGCGACCAACGAGGCTCTGTGGGATGCGGCAGCTAATCTCACTCAGCTGCCCGGCGCATTTGAAACCCACAGC CCAGACGTGCCGACCACCATGCAGCCCCGCAACATGTCGGCTGCGACTGTCGCTCGTGAGGCTGATGCCGCGCCC ATGTCATTGTTTGATCTTTCGAGGGCTACTGCTAGGGTGGCTCAGAGAAACCTGACAGCTATTTCCACGCTGCAC GAAATTGCTACCGCTGAGCCACTGACCGCTCCTCAGACCAGCGCGCCTTCGCGGACCAGAAGAAGAGACCAGCTC AAGGAAGCTGCCACAGGCACCTTGGTCTCCGGAGTCGGCTGGTTGATTGGTGCCAATGTAGGCCAAGACCAGTCT CCATAG |
Gene | >OphauB2|4735 ATGGATGCCTTGTCGGACCTGCAGGCTGCTGAGCGCGCAAGACGCCTTCATCTGGCACCTCTTGACTCGCCCCAT GCTCCCGCCAATGACCCTCTCAGTGTCTTTCTCTACCTGAGAAGCTGCAACATTGACACAGAGACTGGCATGCTC GCCCATCTCCCGCAATTGCTCATGCCATTTCTTCACCACTCTGAATCTTTGCGAGTCTGGATTCTCGCCACAGTT CTGCCATACGTGCGCCGCAACGCAGACTACTACCCAGAAGCTGCTCCAGCCTACGGCTTGCTAGCCTTCCAGCGC TTACCCGGCCCCGAGGCCGTCTCTCATCTTGTCTCCAAGACAAGCTCCTCTAGCCTCGGACGCGACCTCGATGGC CTCGTCTTGCCCTGGCTTGGCGACGACTCTCGCTGGCTACTGACCAAGGAGCATGTGCCCGTCTGTCCCGGTTGG CACAAGGCCCTTGACTGGCTTGCCTCGCATCGCCTCTTGACCCAGTCTGTTAGTCGGTGGCACGGCCTTGATTGC CTCGACCAAGACACCCAGCTTGAACCCTCCAAGCGTCACTATCTGCTGCAGAGCTTTGCTCGGGCAGTCATTGCC TCTGTCTACACGGATCCCGATTCCTCTGTCCACCACCTCACCGCCTCATACCAGACAATAGTCAAGCTGCGTTCT CTTCTTCATCACGCGTCTGATGAGCCACCGCTATCGGAAACCTTGTCCTCCTTACCTTGTGTGCCCTTGGTCGAC AAGTCGGCCTCAAACGAGATCAAAATCATGGCGGCAACCGACTTGCTTGCCTCTCCTTGCCTCGCCTTGTACCCA ACACCAGCTGCCACTGACCTGCTCAAGGCCTTGACTCTTAGTGCTCTTGTTGCCACCCGTATTGGTGTCTCTTGT TCTCCCAAGCAAGCTGGTCACTTGGCCCTTCTGCAAGACGAGAGGGAGCAAAAGACGCACATGTCAAAGCTTTTT CATGCCTTGAGCTCTCATGCTTCAAGCCACAAGGATGACTATTGGCTGGCTGCTCGCCGCCATGTGCTCTGGCTA CGTGATTGGGGCCGCCAGCGCCACCCCCATGACAAGGCTGTTGTAAAGGGGCCCATTGCCACTGTTGCCAGGCAG CACATTGAAAGCGAATACCTCCGAGTCCTTCTTTGGACTTGTCGTAAGTATCTGTCTTTGCTCTCAACTGCCGCA GACGCCTGTCTCACTCGCTTTAGACTACTCTCTGGCCGCACATCTTTACCAAGATGGAAATGTCTATTCTCTACC ATTATCAGCCATTCGTGATACTGTTTACCAATCAGCCTTGTCTGCTTTTGATCATGCTTCCAAGCCGGATTACAC GAGTGGCGGCTTGAAACATTGTCATGACATGTACCAAGATGCTCCTCCCATGCTCTGTACATTATTACTGTACCA AGTGGCTGATGTTTCTTGCTAGCATTCGCGCCTTGCCAATAGCAGCAAATGATTCAATTCCAGAATTCCGGCGCA TAGAGGCTCTTCTCAGGGCCACAAAGACGCTTGGCAGCTATCGACTGCTTCTCAAGGAGGGCGAGCTCTTTAGCC CTGTGCTATTGCGAGTACATTCCGATCCCATCTCTCTTATCGACAAGGTTCTTGAGCAAAATCCACAAGCCTATA CACGACTACAGGAATTCCTAGAAACAGGTCTTAACATGGTGCGTGCTGGCTTGCCGTGCCGTGGTAGGTGGGAAC TGGCCACGCATGATGCAGTCCTCGGCGCTCAGGACAAGGAGAGGCATATGCAGGCTGCCGAAATACGCATCACTG CCATGTGTGTCGAGGCCGCCTTGAAAGAGAATGACTTTGAGACGGCCTATTCATACGTAGTAAACCGTCTTGGTG CACAAACATCATTGCGAGACAAGCCTCATGAGGCGTTTCGGGACGATTGGTCGTGGAAGGCAGCCCTTCAAGCCG GACAGTATGTGCGAACCGCCAAGTCGCAAAAGCCTACGCATCTAGGCACCGCAAGCGGAAACCCTGAGATTCGTC ACTTGGAGCAGCGTATTGACTGCTTGGCCACAGCCCTGAGGGCCGCCCCCACTTGTCAGCTTCCAGGAATACTCA AGACCTTTCGCCGCTGCGAGGAGCAGCTCGACTCGGCAATCAGTGACGAAGCGACCAACGAGGCTCTGTGGGATG CGGCAGCTAATCTCACTCAGCTGCCCGGCGCATTTGAAACCCACAGCCCAGACGTGCCGACCACCATGCAGCCCC GCAACATGTCGGCTGCGACTGTCGCTCGTGAGGCTGATGCCGCGCCCATGTCATTGTTTGATCTTTCGAGGGCTA CTGCTAGGGTGGCTCAGAGAAACCTGACAGCTATTTCCACGCTGCACGAAATTGCTACCGCTGAGCCACTGACCG CTCCTCAGACCAGCGCGCCTTCGCGGACCAGAAGAAGAGACCAGCTCAAGGAAGCTGCCACAGGCACCTTGGTCT CCGGAGTCGGCTGGTTGATTGGTGCCAATGTAGGCCAAGACCAGTCTCCATAG |