© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|472 |
| Gene name | |
| Location | Contig_107:34480..36010 |
| Strand | - |
| Gene length (bp) | 1530 |
| Transcript length (bp) | 1218 |
| Coding sequence length (bp) | 1218 |
| Protein length (aa) | 406 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 40 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 13 | 35 | 22 |
| 2 | 55 | 77 | 22 |
| 3 | 110 | 132 | 22 |
| 4 | 144 | 166 | 22 |
| 5 | 194 | 216 | 22 |
| 6 | 229 | 251 | 22 |
| 7 | 271 | 290 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|472 MADPGAEAAAAKAAFEQFATEAWTLLAVALCITSLRTYARVRAVGIRGLKADDVLVWVAATLYCIETGLAYSVGA VAHGLANNDMTAQERAALSPDSPEYHARIIGSKIQLAGWSVYSTLLWVLKTSLLFFYMRLTAGLSRSYLVRIYVG FGFVGTSWIIVMSNLYLSCRPFHKNWQINPDPGNICYPAVSQQIVWVYLAFNITTDLFLLSIPVPMLWKSSLRPM KKIGLILLFSGGIFVVICATLRCILIVTDVKHGPQLAGSWAVRETFVATITTNLPMVFPLVRLVFSSALGSISSM RSSQKPDSRPSNLVTFGGGGANTPSWRGRGPPTANPIPNFTFSESEERMMDGVKMQNMKPTVQVDPECHVGGDAF RKQVEVDVISQDARPFDVEHQQPGLAHLAK* |
| Coding | >OphauB2|472 ATGGCGGATCCAGGGGCCGAGGCTGCAGCAGCAAAAGCGGCGTTTGAGCAATTCGCTACAGAAGCATGGACGCTG CTGGCCGTGGCGCTGTGCATCACGTCGCTTCGAACATATGCTCGGGTACGAGCTGTGGGTATACGTGGGCTCAAG GCAGACGATGTGCTCGTCTGGGTTGCGGCGACGCTGTATTGCATCGAGACGGGGCTTGCGTACTCGGTTGGTGCG GTTGCTCATGGTCTGGCAAACAATGACATGACTGCTCAGGAGCGAGCAGCGCTGTCACCAGATAGTCCAGAGTAT CACGCAAGAATCATTGGCTCAAAGATTCAGCTGGCCGGATGGTCCGTCTACTCAACCCTGCTCTGGGTTTTGAAA ACATCGCTCCTCTTTTTCTACATGCGCCTAACGGCCGGGCTGAGCAGAAGCTACCTGGTGCGCATCTACGTTGGC TTTGGCTTTGTAGGCACAAGCTGGATCATTGTCATGTCAAATCTCTACCTCTCGTGCCGCCCGTTTCACAAAAAC TGGCAAATCAACCCTGACCCAGGAAATATTTGCTACCCTGCCGTGTCTCAGCAAATCGTCTGGGTCTATCTCGCA TTCAACATCACCACGGATCTTTTTCTCCTCTCTATTCCCGTTCCCATGCTGTGGAAGTCGTCGTTGAGGCCGATG AAGAAGATTGGGCTCATACTTCTCTTTAGTGGTGGCATCTTTGTCGTTATATGCGCCACGCTACGATGCATCCTC ATAGTCACAGACGTCAAGCACGGCCCTCAACTCGCCGGATCATGGGCCGTTCGAGAAACCTTTGTCGCCACAATC ACCACCAATCTCCCCATGGTTTTCCCCCTTGTCCGCCTCGTCTTCTCTTCGGCTCTCGGCTCCATCTCGTCTATG CGCTCCTCGCAAAAGCCCGACAGCCGGCCAAGCAACCTCGTCACCTTTGGCGGCGGCGGCGCAAACACTCCTAGC TGGCGCGGCCGCGGCCCGCCCACCGCCAATCCCATTCCAAACTTTACCTTTAGCGAGAGCGAGGAGCGCATGATG GACGGCGTCAAGATGCAAAACATGAAGCCCACGGTGCAGGTGGATCCCGAGTGCCATGTTGGTGGCGATGCGTTT CGGAAACAAGTCGAGGTGGATGTCATTAGCCAGGATGCGCGGCCGTTTGATGTCGAGCATCAGCAGCCGGGCTTG GCGCATCTTGCCAAATGA |
| Transcript | >OphauB2|472 ATGGCGGATCCAGGGGCCGAGGCTGCAGCAGCAAAAGCGGCGTTTGAGCAATTCGCTACAGAAGCATGGACGCTG CTGGCCGTGGCGCTGTGCATCACGTCGCTTCGAACATATGCTCGGGTACGAGCTGTGGGTATACGTGGGCTCAAG GCAGACGATGTGCTCGTCTGGGTTGCGGCGACGCTGTATTGCATCGAGACGGGGCTTGCGTACTCGGTTGGTGCG GTTGCTCATGGTCTGGCAAACAATGACATGACTGCTCAGGAGCGAGCAGCGCTGTCACCAGATAGTCCAGAGTAT CACGCAAGAATCATTGGCTCAAAGATTCAGCTGGCCGGATGGTCCGTCTACTCAACCCTGCTCTGGGTTTTGAAA ACATCGCTCCTCTTTTTCTACATGCGCCTAACGGCCGGGCTGAGCAGAAGCTACCTGGTGCGCATCTACGTTGGC TTTGGCTTTGTAGGCACAAGCTGGATCATTGTCATGTCAAATCTCTACCTCTCGTGCCGCCCGTTTCACAAAAAC TGGCAAATCAACCCTGACCCAGGAAATATTTGCTACCCTGCCGTGTCTCAGCAAATCGTCTGGGTCTATCTCGCA TTCAACATCACCACGGATCTTTTTCTCCTCTCTATTCCCGTTCCCATGCTGTGGAAGTCGTCGTTGAGGCCGATG AAGAAGATTGGGCTCATACTTCTCTTTAGTGGTGGCATCTTTGTCGTTATATGCGCCACGCTACGATGCATCCTC ATAGTCACAGACGTCAAGCACGGCCCTCAACTCGCCGGATCATGGGCCGTTCGAGAAACCTTTGTCGCCACAATC ACCACCAATCTCCCCATGGTTTTCCCCCTTGTCCGCCTCGTCTTCTCTTCGGCTCTCGGCTCCATCTCGTCTATG CGCTCCTCGCAAAAGCCCGACAGCCGGCCAAGCAACCTCGTCACCTTTGGCGGCGGCGGCGCAAACACTCCTAGC TGGCGCGGCCGCGGCCCGCCCACCGCCAATCCCATTCCAAACTTTACCTTTAGCGAGAGCGAGGAGCGCATGATG GACGGCGTCAAGATGCAAAACATGAAGCCCACGGTGCAGGTGGATCCCGAGTGCCATGTTGGTGGCGATGCGTTT CGGAAACAAGTCGAGGTGGATGTCATTAGCCAGGATGCGCGGCCGTTTGATGTCGAGCATCAGCAGCCGGGCTTG GCGCATCTTGCCAAATGA |
| Gene | >OphauB2|472 ATGGCGGATCCAGGGGCCGAGGCTGCAGCAGCAAAAGCGGCGTTTGAGCAATTCGCTACAGAAGCATGGACGCTG CTGGCCGTGGCGCTGTGCATCACGTCGCTTCGAACATATGCTCGGGTACGAGCTGTGGGTATACGTGGGCTCAAG GCAGACGATGTGCTCGTCTGGGTTGCGGCGGTGAGTTGGAGCAAGAGAGACACGAGGATGAGAGATGAGACTAAA CAAGCTTGATAGACGCTGTATTGCATCGAGACGGGGCTTGCGTACTCGGTTGGTGCGGTTGCTCATGGTCTGGCA AACAATGACATGACTGCTCAGGAGCGAGCAGCGCTGTCACCAGATAGTCCAGAGTATCACGCAAGGTGTGTGGGA TGAAGCAGTCGAGGCCCGTGCGCCTGTGCTTGTTGAGCTAATGCCTCCGTCACGGAATAGAATCATTGGCTCAAA GATTCAGCTGGCCGGATGGTCCGTCTACTCAACCCTGCTCTGGGTTTTGAAAACATCGCTCCTCTTTTTCTACAT GCGCCTAACGGTACGCTCCCTCTGCTGAAACTCTTGCCCACCCCAGCTCATGTGATTTCACAGGCCGGGCTGAGC AGAAGCTACCTGGTGCGCATCTACGTTGGCTTTGGCTTTGTAGGCACAAGCTGGATCATTGTCATGTCAAATCTC TACCTCTCGTGCCGCCCGTTTCACAAAAACTGGCAAATCAACCCTGACCCAGGAAGTCGGTTTGGCCCGTTTACC CAGAACGAGAAAGTGTGGCTTGCAGGCCTCGTGCTGACTGGTTGGAGCTAGATATTTGCTACCCTGCCGTGTCTC AGCAAATCGTCTGGGTCTATCTCGCATTCAACATCACCACGGATCTTTTTCTCCTCTCTATTCCCGTTCCCATGC TGTGGAAGTCGTCGTTGAGGCCGATGAAGAAGATTGGGCTCATACTTCTCTTTAGTGGTGGCATCTTTGTCGTTA TATGCGCCACGCTACGATGCATCCTCATAGTCACAGTGAGCTACTTTATCCTTCTCCTCACCTCGATACCTTTTT CCCTCTAACCCTTTATACCAGGACGTCAAGCACGGCCCTCAACTCGCCGGATCATGGGCCGTTCGAGAAACCTTT GTCGCCACAATCACCACCAATCTCCCCATGGTTTTCCCCCTTGTCCGCCTCGTCTTCTCTTCGGCTCTCGGCTCC ATCTCGTCTATGCGCTCCTCGCAAAAGCCCGACAGCCGGCCAAGCAACCTCGTCACCTTTGGCGGCGGCGGCGCA AACACTCCTAGCTGGCGCGGCCGCGGCCCGCCCACCGCCAATCCCATTCCAAACTTTACCTTTAGCGAGAGCGAG GAGCGCATGATGGACGGCGTCAAGATGCAAAACATGAAGCCCACGGTGCAGGTGGATCCCGAGTGCCATGTTGGT GGCGATGCGTTTCGGAAACAAGTCGAGGTGGATGTCATTAGCCAGGATGCGCGGCCGTTTGATGTCGAGCATCAG CAGCCGGGCTTGGCGCATCTTGCCAAATGA |