Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|4620
Gene name
LocationContig_31:50784..52801
Strand+
Gene length (bp)2017
Transcript length (bp)1953
Coding sequence length (bp)1953
Protein length (aa) 651

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02990 EMP70 Endomembrane protein 70 1.4E-206 68 606

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q04562|TMN2_YEAST Transmembrane 9 superfamily member 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TMN2 PE=1 SV=1 17 650 0.0E+00
sp|P32802|TMN1_YEAST Transmembrane 9 superfamily member 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=EMP70 PE=1 SV=2 3 650 0.0E+00
sp|Q9LIC2|TMN7_ARATH Transmembrane 9 superfamily member 7 OS=Arabidopsis thaliana GN=TMN7 PE=2 SV=1 28 650 1.0E-170
sp|Q9C720|TMN6_ARATH Transmembrane 9 superfamily member 6 OS=Arabidopsis thaliana GN=TMN6 PE=2 SV=1 28 650 6.0E-168
sp|Q66HG5|TM9S2_RAT Transmembrane 9 superfamily member 2 OS=Rattus norvegicus GN=Tm9sf2 PE=2 SV=1 22 650 5.0E-165
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Swissprot ID Swissprot Description Start End E-value
sp|Q04562|TMN2_YEAST Transmembrane 9 superfamily member 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TMN2 PE=1 SV=1 17 650 0.0E+00
sp|P32802|TMN1_YEAST Transmembrane 9 superfamily member 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=EMP70 PE=1 SV=2 3 650 0.0E+00
sp|Q9LIC2|TMN7_ARATH Transmembrane 9 superfamily member 7 OS=Arabidopsis thaliana GN=TMN7 PE=2 SV=1 28 650 1.0E-170
sp|Q9C720|TMN6_ARATH Transmembrane 9 superfamily member 6 OS=Arabidopsis thaliana GN=TMN6 PE=2 SV=1 28 650 6.0E-168
sp|Q66HG5|TM9S2_RAT Transmembrane 9 superfamily member 2 OS=Rattus norvegicus GN=Tm9sf2 PE=2 SV=1 22 650 5.0E-165
sp|P58021|TM9S2_MOUSE Transmembrane 9 superfamily member 2 OS=Mus musculus GN=Tm9sf2 PE=1 SV=1 22 650 1.0E-164
sp|Q99805|TM9S2_HUMAN Transmembrane 9 superfamily member 2 OS=Homo sapiens GN=TM9SF2 PE=1 SV=1 22 650 8.0E-163
sp|Q5R8Y6|TM9S2_PONAB Transmembrane 9 superfamily member 2 OS=Pongo abelii GN=TM9SF2 PE=2 SV=1 22 650 3.0E-161
sp|Q9Y819|YON8_SCHPO Transmembrane 9 superfamily protein C1105.08 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1105.08 PE=3 SV=1 28 650 4.0E-161
sp|Q8RWW1|TMN10_ARATH Transmembrane 9 superfamily member 10 OS=Arabidopsis thaliana GN=TMN10 PE=2 SV=1 28 650 7.0E-157
sp|Q9C5N2|TMN9_ARATH Transmembrane 9 superfamily member 9 OS=Arabidopsis thaliana GN=TMN9 PE=2 SV=1 16 650 1.0E-153
sp|F4KIB2|TMN8_ARATH Transmembrane 9 superfamily member 8 OS=Arabidopsis thaliana GN=TMN8 PE=2 SV=1 15 650 1.0E-153
sp|Q92544|TM9S4_HUMAN Transmembrane 9 superfamily member 4 OS=Homo sapiens GN=TM9SF4 PE=1 SV=2 16 650 1.0E-153
sp|Q5RDY2|TM9S4_PONAB Transmembrane 9 superfamily member 4 OS=Pongo abelii GN=TM9SF4 PE=2 SV=1 16 650 1.0E-153
sp|A5D7E2|TM9S4_BOVIN Transmembrane 9 superfamily member 4 OS=Bos taurus GN=TM9SF4 PE=2 SV=2 16 650 1.0E-152
sp|Q4KLL4|TM9S4_RAT Transmembrane 9 superfamily member 4 OS=Rattus norvegicus GN=Tm9sf4 PE=2 SV=1 17 650 4.0E-152
sp|Q8BH24|TM9S4_MOUSE Transmembrane 9 superfamily member 4 OS=Mus musculus GN=Tm9sf4 PE=1 SV=1 17 650 4.0E-151
sp|Q55FP0|PHG1A_DICDI Putative phagocytic receptor 1a OS=Dictyostelium discoideum GN=phg1a PE=2 SV=1 29 650 6.0E-148
sp|Q9FYQ8|TMN11_ARATH Transmembrane 9 superfamily member 11 OS=Arabidopsis thaliana GN=TMN11 PE=2 SV=1 14 650 2.0E-125
sp|F4JRE0|TMN12_ARATH Transmembrane 9 superfamily member 12 OS=Arabidopsis thaliana GN=TMN12 PE=2 SV=1 15 650 1.0E-114
sp|Q9ZPS7|TMN3_ARATH Transmembrane 9 superfamily member 3 OS=Arabidopsis thaliana GN=TMN3 PE=2 SV=1 39 650 1.0E-101
sp|Q9FHT4|TMN4_ARATH Transmembrane 9 superfamily member 4 OS=Arabidopsis thaliana GN=TMN4 PE=2 SV=1 30 650 2.0E-101
sp|Q940S0|TMN2_ARATH Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana GN=TMN2 PE=2 SV=1 39 650 1.0E-96
sp|Q940G0|TMN1_ARATH Transmembrane 9 superfamily member 1 OS=Arabidopsis thaliana GN=TMN1 PE=1 SV=1 38 650 8.0E-91
sp|Q9HD45|TM9S3_HUMAN Transmembrane 9 superfamily member 3 OS=Homo sapiens GN=TM9SF3 PE=1 SV=2 38 650 7.0E-89
sp|Q9ET30|TM9S3_MOUSE Transmembrane 9 superfamily member 3 OS=Mus musculus GN=Tm9sf3 PE=1 SV=1 38 650 8.0E-89
sp|Q54ZW0|PHG1B_DICDI Putative phagocytic receptor 1b OS=Dictyostelium discoideum GN=phg1b PE=2 SV=1 39 650 8.0E-88
sp|Q9DBU0|TM9S1_MOUSE Transmembrane 9 superfamily member 1 OS=Mus musculus GN=Tm9sf1 PE=2 SV=2 12 650 2.0E-87
sp|A4IFE9|TM9S1_BOVIN Transmembrane 9 superfamily member 1 OS=Bos taurus GN=TM9SF1 PE=2 SV=1 32 650 9.0E-85
sp|O15321|TM9S1_HUMAN Transmembrane 9 superfamily member 1 OS=Homo sapiens GN=TM9SF1 PE=2 SV=2 12 650 2.0E-84
sp|Q5R8F1|TM9S1_PONAB Transmembrane 9 superfamily member 1 OS=Pongo abelii GN=TM9SF1 PE=2 SV=1 12 650 2.0E-84
sp|Q66HF2|TM9S1_RAT Transmembrane 9 superfamily member 1 OS=Rattus norvegicus GN=Tm9sf1 PE=2 SV=1 12 650 8.0E-79
sp|F4HW17|TMN5_ARATH Transmembrane 9 superfamily member 5 OS=Arabidopsis thaliana GN=TMN5 PE=2 SV=1 35 650 1.0E-75
sp|P40071|TMN3_YEAST Transmembrane 9 superfamily member 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TMN3 PE=1 SV=1 34 644 6.0E-56
sp|Q7YTA6|PHG1C_DICDI Putative phagocytic receptor 1c OS=Dictyostelium discoideum GN=phg1c PE=2 SV=1 21 650 1.0E-46
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GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0031224 intrinsic component of membrane No
GO:0110165 cellular anatomical entity No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 29 0.45

Transmembrane Domains

Domain # Start End Length
1 276 298 22
2 352 374 22
3 384 406 22
4 419 441 22
5 456 478 22
6 513 535 22
7 545 567 22
8 580 602 22
9 617 639 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|4620
MHLAHAELLAPLALIALLLALAPNPASAFYLPGVAPTSYKPGDLVPLYANSIRPVAAPQDNRLHSVVSYDYYHPA
FGFCQPKEGPQYVPESLGSILSGDRLMTSPFELHMAQNETCKSLCKVTYPEHARLFLNDCIEEGYSLNWLVDGLP
AGQKIQDDLTGTTFYSPGFQLGSFFVTEDDEEEIVLNNHYEIWIEYHEVSGNPNELRVVGAVVQPSSKAYPGQVD
CAEEHNPVVLMEGEKDEDVQFSYSVYWKKSDTAWATRWDKYLHVFDPKIHWFWLIDTAIIVVILVLTVMSVLVRT
LKKDIARYNRLDQINLEDLGGTSALEDGVQEDSGWKLVHGDVFRTPPYPLLLSVLLGNGAQLFVMTGCTIIFALL
GFLSPSNRGSLSTIMILLYTVLGFVGGYVSARTYKALQGEQWKLNIALTPLLVPGIVFCVFFLLDLFLWAKQSSG
AVPFTTMLVIICIWFIISIPLSIVGSWLGFRSPQIEAPVRTNQIPRQIPPATTYLRPIPSTLIVGLLPFGAIFVE
LYFIMSSIWFSRIYYMFGFLFLCYGLMVVVCAAVTILMTYFLLCAENYNWQWRSFIAAGMSGGYIFLNCLLYLLT
KVKLGGLAGMVLYVGYSALISFLFSILAGSIGYFASWWFVQRIYSSIKID*
Coding >OphauB2|4620
ATGCACCTCGCTCACGCTGAGTTGTTGGCGCCTCTGGCCCTGATAGCCTTGCTGCTTGCCCTGGCGCCGAATCCT
GCATCCGCCTTTTACCTGCCTGGCGTTGCGCCCACTTCGTACAAGCCCGGCGATCTCGTTCCGCTCTATGCCAAC
AGCATCAGACCTGTTGCCGCGCCCCAAGATAACCGTCTGCACTCGGTTGTCTCGTACGACTATTACCATCCTGCC
TTTGGCTTCTGCCAGCCCAAGGAAGGCCCGCAGTATGTGCCTGAGAGCCTGGGCAGCATCTTGTCGGGCGACAGG
CTCATGACGTCGCCCTTTGAGCTGCACATGGCCCAAAACGAGACGTGCAAATCCTTGTGCAAGGTTACATACCCA
GAGCATGCCCGCTTGTTCCTCAACGACTGCATCGAGGAGGGCTACAGTCTTAATTGGCTTGTCGACGGGCTGCCG
GCCGGCCAAAAGATTCAGGACGACTTGACGGGCACTACATTCTACAGTCCTGGCTTCCAACTCGGCTCCTTCTTT
GTCACGGAGGATGACGAGGAGGAAATCGTTCTCAATAACCACTATGAAATATGGATCGAGTACCACGAGGTGAGC
GGCAACCCCAACGAGCTTCGAGTAGTCGGCGCTGTTGTTCAGCCAAGCTCAAAGGCCTATCCTGGCCAAGTCGAC
TGCGCCGAGGAACACAATCCCGTTGTTTTAATGGAGGGCGAAAAGGACGAGGACGTGCAGTTTAGCTACAGCGTC
TACTGGAAAAAGTCAGACACGGCATGGGCTACTCGCTGGGACAAGTACCTCCACGTCTTTGACCCCAAGATTCAC
TGGTTCTGGCTCATTGATACGGCAATCATTGTTGTCATTCTCGTCTTGACAGTCATGTCCGTCCTGGTGCGGACT
CTGAAAAAGGACATTGCTCGCTACAATCGCCTCGATCAAATCAACCTCGAGGACCTTGGCGGCACCTCGGCTCTC
GAGGATGGAGTCCAGGAAGACTCGGGCTGGAAGCTGGTGCATGGCGATGTCTTTCGCACACCGCCATACCCCCTC
CTGCTCTCCGTCTTGCTTGGTAATGGCGCCCAGCTTTTTGTTATGACCGGCTGCACCATCATCTTTGCCCTCCTC
GGCTTCCTCTCGCCTTCGAACCGCGGCTCCTTGAGCACCATTATGATTTTGCTCTACACTGTTTTGGGCTTTGTC
GGCGGCTATGTGTCAGCCAGGACGTACAAGGCCTTGCAGGGCGAGCAATGGAAGCTCAACATTGCCCTGACGCCG
CTGCTTGTCCCCGGCATCGTCTTTTGTGTCTTTTTCCTCCTTGACCTCTTTCTCTGGGCCAAGCAATCCTCGGGC
GCCGTGCCCTTTACGACGATGCTCGTTATTATTTGTATCTGGTTCATCATTTCTATTCCTTTATCCATTGTGGGC
TCGTGGCTAGGATTCCGCAGTCCTCAGATTGAGGCCCCCGTCCGCACCAACCAAATCCCTCGCCAAATCCCGCCC
GCGACAACATATTTGCGCCCGATTCCCAGCACGCTCATTGTTGGTCTGCTGCCCTTTGGTGCCATCTTTGTCGAG
TTGTACTTCATCATGAGCTCTATTTGGTTCAGCCGCATCTACTACATGTTTGGATTTCTCTTCCTCTGCTACGGC
CTCATGGTTGTAGTATGCGCCGCTGTCACCATCCTCATGACTTACTTCTTGCTCTGTGCCGAAAACTACAACTGG
CAGTGGAGGTCTTTTATTGCGGCAGGCATGAGTGGCGGCTACATCTTCCTCAACTGCTTGCTCTACCTACTAACA
AAGGTCAAGCTTGGTGGTCTTGCGGGAATGGTGCTCTACGTTGGCTACAGTGCACTCATTTCGTTTTTGTTTTCT
ATTCTCGCTGGTTCGATTGGCTACTTTGCAAGTTGGTGGTTTGTGCAAAGGATTTATTCGTCCATCAAGATTGAC
TAG
Transcript >OphauB2|4620
ATGCACCTCGCTCACGCTGAGTTGTTGGCGCCTCTGGCCCTGATAGCCTTGCTGCTTGCCCTGGCGCCGAATCCT
GCATCCGCCTTTTACCTGCCTGGCGTTGCGCCCACTTCGTACAAGCCCGGCGATCTCGTTCCGCTCTATGCCAAC
AGCATCAGACCTGTTGCCGCGCCCCAAGATAACCGTCTGCACTCGGTTGTCTCGTACGACTATTACCATCCTGCC
TTTGGCTTCTGCCAGCCCAAGGAAGGCCCGCAGTATGTGCCTGAGAGCCTGGGCAGCATCTTGTCGGGCGACAGG
CTCATGACGTCGCCCTTTGAGCTGCACATGGCCCAAAACGAGACGTGCAAATCCTTGTGCAAGGTTACATACCCA
GAGCATGCCCGCTTGTTCCTCAACGACTGCATCGAGGAGGGCTACAGTCTTAATTGGCTTGTCGACGGGCTGCCG
GCCGGCCAAAAGATTCAGGACGACTTGACGGGCACTACATTCTACAGTCCTGGCTTCCAACTCGGCTCCTTCTTT
GTCACGGAGGATGACGAGGAGGAAATCGTTCTCAATAACCACTATGAAATATGGATCGAGTACCACGAGGTGAGC
GGCAACCCCAACGAGCTTCGAGTAGTCGGCGCTGTTGTTCAGCCAAGCTCAAAGGCCTATCCTGGCCAAGTCGAC
TGCGCCGAGGAACACAATCCCGTTGTTTTAATGGAGGGCGAAAAGGACGAGGACGTGCAGTTTAGCTACAGCGTC
TACTGGAAAAAGTCAGACACGGCATGGGCTACTCGCTGGGACAAGTACCTCCACGTCTTTGACCCCAAGATTCAC
TGGTTCTGGCTCATTGATACGGCAATCATTGTTGTCATTCTCGTCTTGACAGTCATGTCCGTCCTGGTGCGGACT
CTGAAAAAGGACATTGCTCGCTACAATCGCCTCGATCAAATCAACCTCGAGGACCTTGGCGGCACCTCGGCTCTC
GAGGATGGAGTCCAGGAAGACTCGGGCTGGAAGCTGGTGCATGGCGATGTCTTTCGCACACCGCCATACCCCCTC
CTGCTCTCCGTCTTGCTTGGTAATGGCGCCCAGCTTTTTGTTATGACCGGCTGCACCATCATCTTTGCCCTCCTC
GGCTTCCTCTCGCCTTCGAACCGCGGCTCCTTGAGCACCATTATGATTTTGCTCTACACTGTTTTGGGCTTTGTC
GGCGGCTATGTGTCAGCCAGGACGTACAAGGCCTTGCAGGGCGAGCAATGGAAGCTCAACATTGCCCTGACGCCG
CTGCTTGTCCCCGGCATCGTCTTTTGTGTCTTTTTCCTCCTTGACCTCTTTCTCTGGGCCAAGCAATCCTCGGGC
GCCGTGCCCTTTACGACGATGCTCGTTATTATTTGTATCTGGTTCATCATTTCTATTCCTTTATCCATTGTGGGC
TCGTGGCTAGGATTCCGCAGTCCTCAGATTGAGGCCCCCGTCCGCACCAACCAAATCCCTCGCCAAATCCCGCCC
GCGACAACATATTTGCGCCCGATTCCCAGCACGCTCATTGTTGGTCTGCTGCCCTTTGGTGCCATCTTTGTCGAG
TTGTACTTCATCATGAGCTCTATTTGGTTCAGCCGCATCTACTACATGTTTGGATTTCTCTTCCTCTGCTACGGC
CTCATGGTTGTAGTATGCGCCGCTGTCACCATCCTCATGACTTACTTCTTGCTCTGTGCCGAAAACTACAACTGG
CAGTGGAGGTCTTTTATTGCGGCAGGCATGAGTGGCGGCTACATCTTCCTCAACTGCTTGCTCTACCTACTAACA
AAGGTCAAGCTTGGTGGTCTTGCGGGAATGGTGCTCTACGTTGGCTACAGTGCACTCATTTCGTTTTTGTTTTCT
ATTCTCGCTGGTTCGATTGGCTACTTTGCAAGTTGGTGGTTTGTGCAAAGGATTTATTCGTCCATCAAGATTGAC
TAG
Gene >OphauB2|4620
ATGCACCTCGCTCACGCTGAGTTGTTGGCGCCTCTGGCCCTGATAGCCTTGCTGCTTGCCCTGGCGCCGAATCCT
GCATCCGCCTTTTACCTGCCTGGCGTTGCGCCCACTTCGTACAAGCCCGGCGATCTCGTTCCGCTCTATGCCAAC
AGCATCAGACCTGTTGCCGCGCCCCAAGATAACCGTCTGCACTCGGTTGTCTCGTACGACTATTACCATCCTGCC
TTTGGCTTCTGCCAGCCCAAGGAAGGCCCGCAGTATGTGCCTGAGAGCCTGGGCAGCATCTTGTCGGGCGACAGG
CTCATGACGTCGCCCTTTGAGCTGCACATGGCCCAAAACGAGACGTGCAAATCCTTGTGCAAGGTTACATACCCA
GAGCATGCCCGCTTGTTCCTCAACGACTGCATCGAGGAGGGCTACAGTCTTAATTGGCTTGTCGACGGGCTGCCG
GCCGGCCAAAAGATTCAGGACGACTTGACGGGCACTACATTCTACAGTCCTGGCTTCCAACTCGGCTCCTTCTTT
GTCACGGAGGATGACGAGGAGGAAATCGTTCTCAATAACCACTATGAAATATGGATCGAGTACCACGAGGTGAGC
GGCAACCCCAACGAGCTTCGAGTAGTCGGCGCTGTTGTTCAGCCAAGCTCAAAGGCCTATCCTGGCCAAGTCGAC
TGCGCCGAGGAACACAATCCCGTTGTTTTAATGGAGGGCGAAAAGGACGAGGACGTGCAGTTTAGCTACAGCGTC
TACTGGAAAAAGTCAGACACGGCATGGGCTACTCGCTGGGACAAGTACCTCCACGTCTTTGACCCCAAGATTCAC
TGGTTCTGGCTCATTGATACGGCAATCATTGTTGTCATTCTCGTCTTGACAGTCATGTCCGTCCTGGTGCGGACT
CTGAAAAAGGACATTGCTCGCTACAATCGCCTCGATCAAATCAACCTCGAGGACCTTGGCGGCACCTCGGCTCTC
GAGGATGGAGTCCAGGAAGACTCGGGCTGGAAGCTGGTGCATGGCGATGTCTTTCGCACACCGCCATACCCCCTC
CTGCTCTCCGTCTTGCTTGGTAATGGCGCCCAGCTTTTTGTTATGACCGGCTGCACCATCATCTTTGCCCTCCTC
GGCTTCCTCTCGCCTTCGAACCGCGGCTCCTTGAGCACCATTATGATTTTGCTCTACACTGTTTTGGGCTTTGTC
GGCGGCTATGTGTCAGCCAGGACGTACAAGGCCTTGCAGGGCGAGCAATGGAAGCTCAACATTGCCCTGACGCCG
CTGCTTGTCCCCGGCATCGTCTTTTGTGTCTTTTTCCTCCTTGACCTCTTTCTCTGGGCCAAGCAATCCTCGGGC
GCCGTGCCCTTTACGACGATGCTCGTTATTATTTGTATCTGGTTCATCATTTCTATTCCTTTATCCATTGTGGGC
TCGTGGCTAGGATTCCGCAGTCCTCAGATTGAGGCCCCCGTCCGCACCAACCAAATCCCTCGCCAAATCCCGCCC
GCGACAACATATTTGCGCCCGATTCCCAGCACGCTCATTGTTGGTCTGCTGCCCTTTGGTGCCATCTTTGTCGAG
TTGTACTTCATCATGAGCTCTATTTGGTTCAGCCGCATCTACTACATGTTTGGATTTCTCTTCCTCTGCTACGGC
CTCATGGTTGTAGTATGCGCCGCTGTCACCATCCTCATGACTTACTTCTTGCTCTGTGCCGAAAACTACAACTGG
CAGTGGAGGTCTTTTATTGCGGCAGGCATGAGTGGCGGCTACATCTTCCTCAACTGCTTGCTCTACCTACTAACA
AAGGTCAAGCTTGGTGGTCTTGCGGGAATGGTGCTCTACGTTGGCTACAGTGCACTCATTTCGTTTTTGTTTTCT
ATTCTCGCTGGTAAGTCGGTTCCTGATGCAGAAAAGAAGTGAAGGGCGACTCTGACGTGTGCTTCTATTTTTAGG
TTCGATTGGCTACTTTGCAAGTTGGTGGTTTGTGCAAAGGATTTATTCGTCCATCAAGATTGACTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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