Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|4585
Gene name
LocationContig_304:736..1984
Strand+
Gene length (bp)1248
Transcript length (bp)765
Coding sequence length (bp)765
Protein length (aa) 255

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01393 Chromo_shadow Chromo shadow domain 1.2E-17 189 243
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 2.4E-12 75 127

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O42934|CHP2_SCHPO Chromo domain-containing protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=chp2 PE=3 SV=1 72 244 1.0E-18
sp|P40381|SWI6_SCHPO Chromatin-associated protein swi6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=swi6 PE=1 SV=1 188 248 4.0E-14

GO

GO Term Description Terminal node
GO:0005634 nucleus Yes
GO:0110165 cellular anatomical entity No
GO:0043229 intracellular organelle No
GO:0043226 organelle No
GO:0005575 cellular_component No
GO:0043231 intracellular membrane-bounded organelle No
GO:0043227 membrane-bounded organelle No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup4196
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|4650
Ophiocordyceps australis map64 (Brazil) OphauB2|4585 (this protein)
Ophiocordyceps camponoti-floridani Ophcf2|01265
Ophiocordyceps camponoti-rufipedis Ophun1|802
Ophiocordyceps kimflemingae Ophio5|8488
Ophiocordyceps subramaniannii Hirsu2|8528

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|4585
MPPALSDDEASDLELQHGRSSNQSSSSDEDEVMHDAVPTSSKKGARKQKVEQVRQVEDEEDEDEDDGDDLDEDEF
IVETIKKHMVDVDGTLKFLVKWEGWDKKTDMTWEPEENLKESASEILEAYLESIGGRDMIFEETEKAVRSKKRGR
ASAGATPASAKRSRKNGSHPSEMTPSATSKKWSPPAGSWEDEIETIDACEAEGNGKLVVYLIWKNGRKTRHDTSV
IYKKCPQKMLQFYERHVKIIRDEKASEEA*
Coding >OphauB2|4585
ATGCCTCCAGCATTGAGCGACGACGAGGCGTCGGATCTCGAGCTGCAGCACGGGAGAAGCTCCAACCAGTCATCG
TCGTCAGACGAAGATGAAGTCATGCATGATGCAGTCCCGACAAGTAGCAAAAAAGGCGCTCGCAAGCAAAAAGTC
GAACAAGTGAGACAAGTGGAAGATGAAGAAGATGAAGACGAGGACGATGGCGACGATCTGGATGAAGACGAGTTC
ATTGTAGAAACCATCAAGAAGCACATGGTTGATGTGGATGGCACTCTCAAGTTCCTCGTCAAGTGGGAAGGATGG
GACAAGAAGACGGACATGACATGGGAGCCCGAAGAGAACCTCAAGGAATCCGCCTCGGAGATACTCGAAGCATAC
CTGGAGAGCATTGGAGGGCGCGACATGATTTTCGAGGAGACGGAAAAGGCGGTGCGGAGCAAGAAGCGTGGAAGG
GCTTCGGCGGGTGCTACGCCTGCTTCAGCGAAGCGATCGCGTAAAAATGGCTCACATCCATCTGAAATGACGCCT
TCTGCAACATCTAAGAAATGGAGCCCCCCTGCCGGCTCTTGGGAAGATGAAATCGAAACAATTGACGCTTGCGAG
GCCGAGGGCAATGGCAAGTTGGTTGTGTACCTGATTTGGAAGAATGGTCGCAAAACCAGGCACGACACGTCCGTT
ATATACAAGAAATGCCCGCAAAAGATGCTTCAATTCTACGAGCGGCATGTCAAGATTATCAGGGATGAGAAGGCC
AGTGAGGAAGCTTGA
Transcript >OphauB2|4585
ATGCCTCCAGCATTGAGCGACGACGAGGCGTCGGATCTCGAGCTGCAGCACGGGAGAAGCTCCAACCAGTCATCG
TCGTCAGACGAAGATGAAGTCATGCATGATGCAGTCCCGACAAGTAGCAAAAAAGGCGCTCGCAAGCAAAAAGTC
GAACAAGTGAGACAAGTGGAAGATGAAGAAGATGAAGACGAGGACGATGGCGACGATCTGGATGAAGACGAGTTC
ATTGTAGAAACCATCAAGAAGCACATGGTTGATGTGGATGGCACTCTCAAGTTCCTCGTCAAGTGGGAAGGATGG
GACAAGAAGACGGACATGACATGGGAGCCCGAAGAGAACCTCAAGGAATCCGCCTCGGAGATACTCGAAGCATAC
CTGGAGAGCATTGGAGGGCGCGACATGATTTTCGAGGAGACGGAAAAGGCGGTGCGGAGCAAGAAGCGTGGAAGG
GCTTCGGCGGGTGCTACGCCTGCTTCAGCGAAGCGATCGCGTAAAAATGGCTCACATCCATCTGAAATGACGCCT
TCTGCAACATCTAAGAAATGGAGCCCCCCTGCCGGCTCTTGGGAAGATGAAATCGAAACAATTGACGCTTGCGAG
GCCGAGGGCAATGGCAAGTTGGTTGTGTACCTGATTTGGAAGAATGGTCGCAAAACCAGGCACGACACGTCCGTT
ATATACAAGAAATGCCCGCAAAAGATGCTTCAATTCTACGAGCGGCATGTCAAGATTATCAGGGATGAGAAGGCC
AGTGAGGAAGCTTGA
Gene >OphauB2|4585
ATGCCTCCAGGTTCGTTTGCACTCTCTTCACCGCCAATTGCCCATCTTAGCCCCTGTCCCATGTCTTTTGCGTTG
TGTCGGCCCCATCCCATGCCGGAAAAAATATCTCTGCGATTACCCTTATTGCCCGCTACACAACCCTCATCAAGA
AAAGGCCAGCGCTGCATCTCCATCCTGTGCTTCCAATTCTTGCTCTCTCCCACTACCGCACATACCCTGCAATGG
CGCGCAAGGAACGTCCTGCTAAGAGCAAGTTAGCATTGAGCGACGACGAGGCGTCGGATCTCGAGCTGCAGCACG
GGAGAAGCTCCAACCAGTCATCGTCGTCAGACGAAGATGAAGTCATGCATGATGCAGTCCCGACAAGTAGCAAAA
AAGGCGCTCGCAAGCAAAAAGTCGAACAAGTGAGACAAGTGGAAGATGAAGAAGATGAAGACGAGGACGATGGCG
ACGATCTGGATGAAGACGAGTGTGGCTTCCCGAGATAGTCTCTGCACCAGCACATACTAATCTTGTGCAGGTTCA
TTGTAGAAACCATCAAGAAGCACATGGTTGATGTGGATGTGAGAAGTCGAGCCTCTGCTGGCAGGACTCCATGGA
CACTGACTCGTGGCAGGGCACTCTCAAGTTCCTCGTCAAGTGGGAAGGATGGGACAAGAAGACGGACATGACATG
GGAGCCCGAAGAGAACCTCAAGTAAGTTTCTGGAAACGTAGATGGAGGCGCCAATTGGAACCGGGACTGACCGGT
TTACAGGGAATCCGCCTCGGAGATACTCGAAGCATACCTGGAGAGCATTGGAGGGCGCGACATGATTTTCGAGGA
GACGGAAAAGGCGGTGCGGAGCAAGAAGCGTGGAAGGGCTTCGGCGGGTGCTACGCCTGCTTCAGCGAAGCGATC
GCGTAAAAATGGCTCACATCCATCTGAAATGACGCCTTCTGCAACATCTAAGAAATGGAGCCCCCCTGCCGGCTC
TTGGGAAGATGAAATCGAAACAATTGACGCTTGCGAGGCCGAGGGCAATGGCAAGTTGGTTGTGTACCTGATTTG
GAAGAATGGTCGCAAAACCAGGCACGACACGTCCGTTATATACAAGAAATGCCCGCAAAAGGTATGGCGTCTAGC
AACGGTGTATTCTACTCAAGTTGGGTGCGTGCTTGCTGACTATTTTGGCACGCACAGATGCTTCAATTCTACGAG
CGGCATGTCAAGATTATCAGGGATGAGAAGGCCAGTGAGGAAGCTTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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