© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|4569 |
| Gene name | |
| Location | Contig_30:134930..135945 |
| Strand | - |
| Gene length (bp) | 1015 |
| Transcript length (bp) | 954 |
| Coding sequence length (bp) | 954 |
| Protein length (aa) | 318 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04893 | Yip1 | Yip1 domain | 9.7E-08 | 109 | 296 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O94348|YIP1_SCHPO | Protein transport protein yip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=yip1 PE=3 SV=1 | 17 | 302 | 5.0E-63 |
| sp|Q54QY3|YIPF5_DICDI | Protein YIPF5 homolog OS=Dictyostelium discoideum GN=yipf5 PE=3 SV=1 | 81 | 300 | 6.0E-45 |
| sp|Q9JIM5|YIPF7_MOUSE | Protein YIPF7 OS=Mus musculus GN=Yipf7 PE=2 SV=1 | 19 | 300 | 4.0E-41 |
| sp|Q6P5I8|YIPF5_DANRE | Protein YIPF5 OS=Danio rerio GN=yipf5 PE=2 SV=1 | 84 | 300 | 5.0E-41 |
| sp|Q5E9E8|YIPF5_BOVIN | Protein YIPF5 OS=Bos taurus GN=YIPF5 PE=2 SV=1 | 19 | 300 | 5.0E-41 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O94348|YIP1_SCHPO | Protein transport protein yip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=yip1 PE=3 SV=1 | 17 | 302 | 5.0E-63 |
| sp|Q54QY3|YIPF5_DICDI | Protein YIPF5 homolog OS=Dictyostelium discoideum GN=yipf5 PE=3 SV=1 | 81 | 300 | 6.0E-45 |
| sp|Q9JIM5|YIPF7_MOUSE | Protein YIPF7 OS=Mus musculus GN=Yipf7 PE=2 SV=1 | 19 | 300 | 4.0E-41 |
| sp|Q6P5I8|YIPF5_DANRE | Protein YIPF5 OS=Danio rerio GN=yipf5 PE=2 SV=1 | 84 | 300 | 5.0E-41 |
| sp|Q5E9E8|YIPF5_BOVIN | Protein YIPF5 OS=Bos taurus GN=YIPF5 PE=2 SV=1 | 19 | 300 | 5.0E-41 |
| sp|Q4R5M4|YIPF5_MACFA | Protein YIPF5 OS=Macaca fascicularis GN=YIPF5 PE=2 SV=1 | 19 | 300 | 7.0E-41 |
| sp|Q66KA5|YIPF5_XENTR | Protein YIPF5 OS=Xenopus tropicalis GN=yipf5 PE=2 SV=1 | 84 | 300 | 8.0E-41 |
| sp|Q5R6W5|YIPF5_PONAB | Protein YIPF5 OS=Pongo abelii GN=YIPF5 PE=2 SV=1 | 19 | 300 | 8.0E-41 |
| sp|Q969M3|YIPF5_HUMAN | Protein YIPF5 OS=Homo sapiens GN=YIPF5 PE=1 SV=1 | 19 | 300 | 8.0E-41 |
| sp|Q7SXS2|YIPF5_XENLA | Protein YIPF5 OS=Xenopus laevis GN=yipf5 PE=2 SV=1 | 19 | 300 | 2.0E-40 |
| sp|Q8N8F6|YIPF7_HUMAN | Protein YIPF7 OS=Homo sapiens GN=YIPF7 PE=2 SV=2 | 82 | 300 | 3.0E-40 |
| sp|P53039|YIP1_YEAST | Protein transport protein YIP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIP1 PE=1 SV=1 | 71 | 300 | 2.0E-38 |
| sp|Q5XID0|YIPF5_RAT | Protein YIPF5 OS=Rattus norvegicus GN=Yipf5 PE=2 SV=1 | 19 | 300 | 4.0E-34 |
| sp|Q9EQQ2|YIPF5_MOUSE | Protein YIPF5 OS=Mus musculus GN=Yipf5 PE=1 SV=1 | 94 | 300 | 6.0E-34 |
| sp|A5D7K7|YIPF7_BOVIN | Protein YIPF7 OS=Bos taurus GN=YIPF7 PE=2 SV=1 | 95 | 300 | 1.0E-33 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016020 | membrane | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005575 | cellular_component | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 52 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 125 | 142 | 17 |
| 2 | 147 | 169 | 22 |
| 3 | 224 | 246 | 22 |
| 4 | 252 | 274 | 22 |
| 5 | 281 | 300 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|4569 MANYYGAQPYGASAGAPSNLQFYPSSYSPAPSQQPQAATYGYPGGAAASGFGAPAFVSSGVSGRMGEHGGLRTGW LAAFSTEGYDGEPPLWEELGVNFAHIQKKTLAVLNPFRHIDQHLMDDSDLAGPILFFLLFGTFLLFSGKVHFGYI YGLALLGSTSLHTILSLMSPTEPADAAHEYQPQYGPGAPNPASSSAPDAASAMQHPGAKSGGHFSATLTFPRSAS VLGYCLLPLVATSLCGVVMPMDTPLGIILTLAAIVWCTYSASGMFCAVGRMTGMRVLVAYPLALFYVGFGIIGIF SSRGSGSLANAAAKLNP* |
| Coding | >OphauB2|4569 ATGGCCAACTACTACGGCGCGCAGCCATATGGCGCCTCTGCCGGCGCGCCCAGCAATTTGCAATTCTACCCGTCC TCCTACTCCCCAGCTCCCTCGCAGCAGCCCCAGGCCGCCACATACGGCTACCCTGGCGGCGCTGCTGCCTCTGGC TTCGGCGCGCCGGCCTTTGTGAGCAGCGGTGTCTCTGGTCGCATGGGCGAGCACGGCGGCCTGCGCACTGGATGG CTGGCTGCCTTTTCCACCGAGGGCTATGACGGCGAGCCGCCGCTGTGGGAGGAGCTGGGCGTCAACTTTGCCCAC ATTCAGAAAAAGACACTGGCAGTCCTCAACCCCTTCCGCCACATTGACCAGCATCTCATGGACGATTCAGACCTC GCCGGGCCTATTCTCTTCTTTCTTCTCTTCGGCACCTTTCTCCTCTTCTCTGGGAAAGTCCACTTTGGCTACATT TACGGCCTGGCCCTCTTGGGCTCTACCTCGCTGCATACCATTCTGTCCCTCATGTCTCCGACTGAGCCTGCCGAT GCCGCTCACGAGTATCAGCCACAGTACGGCCCTGGCGCTCCGAATCCGGCCTCGTCGTCGGCTCCTGATGCTGCC TCTGCCATGCAACACCCGGGTGCCAAGTCGGGCGGCCACTTCTCCGCTACCCTCACGTTCCCCCGTTCCGCCTCC GTCTTGGGCTACTGTCTGCTGCCCCTTGTTGCCACATCACTCTGCGGCGTCGTCATGCCTATGGACACGCCCTTG GGCATCATTCTCACCTTGGCTGCCATTGTGTGGTGTACCTACAGCGCCAGCGGCATGTTTTGCGCCGTTGGTCGC ATGACGGGCATGCGTGTCCTCGTCGCCTACCCACTTGCTCTCTTCTACGTCGGCTTCGGCATCATCGGCATCTTC AGTAGCAGAGGCAGTGGCTCGCTTGCGAATGCCGCCGCCAAGCTGAATCCGTGA |
| Transcript | >OphauB2|4569 ATGGCCAACTACTACGGCGCGCAGCCATATGGCGCCTCTGCCGGCGCGCCCAGCAATTTGCAATTCTACCCGTCC TCCTACTCCCCAGCTCCCTCGCAGCAGCCCCAGGCCGCCACATACGGCTACCCTGGCGGCGCTGCTGCCTCTGGC TTCGGCGCGCCGGCCTTTGTGAGCAGCGGTGTCTCTGGTCGCATGGGCGAGCACGGCGGCCTGCGCACTGGATGG CTGGCTGCCTTTTCCACCGAGGGCTATGACGGCGAGCCGCCGCTGTGGGAGGAGCTGGGCGTCAACTTTGCCCAC ATTCAGAAAAAGACACTGGCAGTCCTCAACCCCTTCCGCCACATTGACCAGCATCTCATGGACGATTCAGACCTC GCCGGGCCTATTCTCTTCTTTCTTCTCTTCGGCACCTTTCTCCTCTTCTCTGGGAAAGTCCACTTTGGCTACATT TACGGCCTGGCCCTCTTGGGCTCTACCTCGCTGCATACCATTCTGTCCCTCATGTCTCCGACTGAGCCTGCCGAT GCCGCTCACGAGTATCAGCCACAGTACGGCCCTGGCGCTCCGAATCCGGCCTCGTCGTCGGCTCCTGATGCTGCC TCTGCCATGCAACACCCGGGTGCCAAGTCGGGCGGCCACTTCTCCGCTACCCTCACGTTCCCCCGTTCCGCCTCC GTCTTGGGCTACTGTCTGCTGCCCCTTGTTGCCACATCACTCTGCGGCGTCGTCATGCCTATGGACACGCCCTTG GGCATCATTCTCACCTTGGCTGCCATTGTGTGGTGTACCTACAGCGCCAGCGGCATGTTTTGCGCCGTTGGTCGC ATGACGGGCATGCGTGTCCTCGTCGCCTACCCACTTGCTCTCTTCTACGTCGGCTTCGGCATCATCGGCATCTTC AGTAGCAGAGGCAGTGGCTCGCTTGCGAATGCCGCCGCCAAGCTGAATCCGTGA |
| Gene | >OphauB2|4569 ATGGCCAACTACTACGGCGCGCAGCCATATGGCGCCTCTGCCGGCGCGCCCAGCAATTTGCAATTCTACCCGTCC TCCTACTCCCCAGCTCCCTCGCAGCAGCCCCAGGCCGCCACATACGGCTACCCTGGCGGCGCTGCTGCCTCTGGC TTCGGCGCGCCGGCCTTTGTGAGCAGCGGTGTCTCTGGTCGCATGGGCGAGCACGGCGGCCTGCGCACTGGATGG CTGGCTGCCTTTTCCACCGAGGGCTATGACGGCGAGCCGCCGCTGTGGGAGGAGCTGGGCGTCAACTTTGCCCAC ATTCAGAAAAAGGTGCGCCCAATGGAGCCGAGAGCTGGCTGCCACGAGAGCCTGATGCTGACGCCCGTGCCAGAC ACTGGCAGTCCTCAACCCCTTCCGCCACATTGACCAGCATCTCATGGACGATTCAGACCTCGCCGGGCCTATTCT CTTCTTTCTTCTCTTCGGCACCTTTCTCCTCTTCTCTGGGAAAGTCCACTTTGGCTACATTTACGGCCTGGCCCT CTTGGGCTCTACCTCGCTGCATACCATTCTGTCCCTCATGTCTCCGACTGAGCCTGCCGATGCCGCTCACGAGTA TCAGCCACAGTACGGCCCTGGCGCTCCGAATCCGGCCTCGTCGTCGGCTCCTGATGCTGCCTCTGCCATGCAACA CCCGGGTGCCAAGTCGGGCGGCCACTTCTCCGCTACCCTCACGTTCCCCCGTTCCGCCTCCGTCTTGGGCTACTG TCTGCTGCCCCTTGTTGCCACATCACTCTGCGGCGTCGTCATGCCTATGGACACGCCCTTGGGCATCATTCTCAC CTTGGCTGCCATTGTGTGGTGTACCTACAGCGCCAGCGGCATGTTTTGCGCCGTTGGTCGCATGACGGGCATGCG TGTCCTCGTCGCCTACCCACTTGCTCTCTTCTACGTCGGCTTCGGCATCATCGGCATCTTCAGTAGCAGAGGCAG TGGCTCGCTTGCGAATGCCGCCGCCAAGCTGAATCCGTGA |