Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|4565
Gene name
LocationContig_30:125432..126577
Strand-
Gene length (bp)1145
Transcript length (bp)1083
Coding sequence length (bp)1083
Protein length (aa) 361

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01266 DAO FAD dependent oxidoreductase 1.2E-30 4 344

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9Y7N4|OXDA_SCHPO D-amino-acid oxidase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dao1 PE=3 SV=1 4 352 4.0E-34
sp|Q99042|OXDA_TRIVR D-amino-acid oxidase OS=Trigonopsis variabilis GN=DAO1 PE=3 SV=1 1 353 1.0E-31
sp|P24552|OXDA_FUSSO D-amino-acid oxidase OS=Fusarium solani subsp. pisi PE=1 SV=1 3 350 3.0E-30
sp|P80324|OXDA_RHOTO D-amino-acid oxidase OS=Rhodosporidium toruloides GN=DAO1 PE=1 SV=1 4 353 2.0E-26
sp|Q556W1|OXDD_DICDI D-aspartate oxidase OS=Dictyostelium discoideum GN=ddo-1 PE=3 SV=1 4 348 4.0E-22
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Swissprot ID Swissprot Description Start End E-value
sp|Q9Y7N4|OXDA_SCHPO D-amino-acid oxidase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dao1 PE=3 SV=1 4 352 4.0E-34
sp|Q99042|OXDA_TRIVR D-amino-acid oxidase OS=Trigonopsis variabilis GN=DAO1 PE=3 SV=1 1 353 1.0E-31
sp|P24552|OXDA_FUSSO D-amino-acid oxidase OS=Fusarium solani subsp. pisi PE=1 SV=1 3 350 3.0E-30
sp|P80324|OXDA_RHOTO D-amino-acid oxidase OS=Rhodosporidium toruloides GN=DAO1 PE=1 SV=1 4 353 2.0E-26
sp|Q556W1|OXDD_DICDI D-aspartate oxidase OS=Dictyostelium discoideum GN=ddo-1 PE=3 SV=1 4 348 4.0E-22
sp|A3KCL7|OXDD_PIG D-aspartate oxidase OS=Sus scrofa GN=DDO PE=2 SV=1 4 354 1.0E-20
sp|Q99489|OXDD_HUMAN D-aspartate oxidase OS=Homo sapiens GN=DDO PE=2 SV=1 2 356 3.0E-20
sp|P31228|OXDD_BOVIN D-aspartate oxidase OS=Bos taurus GN=DDO PE=1 SV=2 4 354 9.0E-19
sp|Q922Z0|OXDD_MOUSE D-aspartate oxidase OS=Mus musculus GN=Ddo PE=1 SV=1 4 354 1.0E-14
sp|P9WP26|DAO_MYCTO Probable D-amino-acid oxidase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=aao PE=3 SV=1 4 346 4.0E-14
sp|P9WP27|DAO_MYCTU Probable D-amino-acid oxidase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=aao PE=1 SV=1 4 346 4.0E-14
sp|Q95XG9|OXDA_CAEEL D-amino-acid oxidase OS=Caenorhabditis elegans GN=daao-1 PE=1 SV=2 143 351 3.0E-13
sp|P00371|OXDA_PIG D-amino-acid oxidase OS=Sus scrofa GN=DAO PE=1 SV=2 4 346 9.0E-13
sp|P22942|OXDA_RABIT D-amino-acid oxidase OS=Oryctolagus cuniculus GN=DAO PE=2 SV=1 4 346 4.0E-11
sp|A8XJ44|OXDA_CAEBR D-amino-acid oxidase OS=Caenorhabditis briggsae GN=daao-1 PE=3 SV=1 1 351 6.0E-11
sp|P14920|OXDA_HUMAN D-amino-acid oxidase OS=Homo sapiens GN=DAO PE=1 SV=3 4 355 2.0E-10
sp|A2V9Y8|OXDA_MACFA D-amino-acid oxidase OS=Macaca fascicularis GN=DAO PE=2 SV=1 4 346 5.0E-10
sp|Q9Z1M5|OXDA_CAVPO D-amino-acid oxidase OS=Cavia porcellus GN=DAO PE=2 SV=1 4 346 9.0E-10
sp|A8WXM1|OXDD1_CAEBR D-aspartate oxidase 1 OS=Caenorhabditis briggsae GN=CBG04460 PE=3 SV=1 136 348 1.0E-08
sp|O45307|OXDD1_CAEEL D-aspartate oxidase 1 OS=Caenorhabditis elegans GN=ddo-1 PE=1 SV=2 4 352 3.0E-08
sp|Q19564|OXDD2_CAEEL D-aspartate oxidase 2 OS=Caenorhabditis elegans GN=ddo-2 PE=1 SV=1 136 348 1.0E-07
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GO

GO Term Description Terminal node
GO:0016491 oxidoreductase activity Yes
GO:0003824 catalytic activity No
GO:0003674 molecular_function No

SignalP

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SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|4565
MATVVVIGAGVVGLSTAVKLQRLGQGRYGIVVIARDWPPSTPGAAPSHSADYASMWAGAHVRPIPATTAQLRREA
ALMRRTVAEFAALEQGEAQCGITRTTGVEMLEEPDEGYRRLDGSTFARETGLEGFKTIEGDSMPEGVQLGFEYQT
FCINPGVYCQFLVRQLLEGGAKTLQRELGSEWEAFGAGGEVLFVVNASGMGFGDAQCFPTRGQTLVTNMAHVSKT
VTRQNRDGSWAFLVPRFMGGGTIVGGTKEAHDWRTEPDAATRQRLLAAGRELEPYACDTPPPPGWELSVVADVVG
RRPTRAGGLRLDVETDLEGRSVVHAYGAGGRGYELSWGIASEVVRLAEPLINRLPIVGEH*
Coding >OphauB2|4565
ATGGCCACGGTTGTAGTGATAGGGGCAGGCGTCGTTGGACTCTCGACGGCCGTCAAGCTGCAGCGACTTGGTCAA
GGGCGCTACGGCATTGTGGTGATTGCGCGCGACTGGCCGCCGTCGACTCCGGGAGCAGCTCCATCGCACTCAGCC
GACTATGCCTCCATGTGGGCAGGAGCCCATGTGCGGCCGATTCCTGCGACGACGGCACAGCTGCGGCGCGAGGCA
GCTCTCATGCGAAGGACTGTGGCCGAGTTTGCGGCTCTGGAGCAAGGCGAGGCACAGTGTGGCATCACGCGCACC
ACGGGCGTGGAGATGCTCGAGGAGCCCGACGAGGGCTATCGGCGGCTCGACGGCTCGACATTTGCACGGGAGACG
GGGCTGGAGGGCTTCAAGACAATCGAGGGCGACTCGATGCCCGAGGGCGTGCAGCTAGGGTTTGAGTACCAGACG
TTTTGCATCAACCCGGGCGTCTACTGCCAGTTTCTGGTGCGCCAGCTGCTGGAGGGCGGGGCCAAGACGCTGCAG
AGAGAGCTGGGCAGCGAGTGGGAGGCGTTTGGCGCGGGCGGCGAGGTGCTGTTTGTGGTCAATGCCAGCGGCATG
GGCTTTGGCGACGCTCAGTGCTTCCCCACGCGCGGACAGACTCTGGTCACCAACATGGCGCACGTCAGCAAGACG
GTGACGCGCCAGAACCGCGACGGCAGCTGGGCCTTTTTGGTGCCGCGCTTCATGGGCGGCGGCACCATTGTTGGC
GGCACCAAGGAGGCTCACGACTGGCGCACCGAGCCTGATGCGGCCACGCGGCAGCGGCTGCTGGCTGCTGGCCGA
GAGCTCGAACCCTATGCCTGCGACACGCCGCCGCCGCCAGGCTGGGAGCTGAGCGTCGTGGCCGACGTGGTAGGG
CGGCGCCCGACGCGTGCTGGCGGTCTGAGACTCGACGTCGAGACCGACTTGGAGGGGCGGAGCGTGGTGCATGCC
TATGGCGCAGGAGGCCGAGGCTACGAACTGAGCTGGGGCATTGCCAGCGAGGTGGTTCGCCTGGCCGAGCCGCTA
ATCAATCGCCTGCCAATAGTGGGTGAGCACTAG
Transcript >OphauB2|4565
ATGGCCACGGTTGTAGTGATAGGGGCAGGCGTCGTTGGACTCTCGACGGCCGTCAAGCTGCAGCGACTTGGTCAA
GGGCGCTACGGCATTGTGGTGATTGCGCGCGACTGGCCGCCGTCGACTCCGGGAGCAGCTCCATCGCACTCAGCC
GACTATGCCTCCATGTGGGCAGGAGCCCATGTGCGGCCGATTCCTGCGACGACGGCACAGCTGCGGCGCGAGGCA
GCTCTCATGCGAAGGACTGTGGCCGAGTTTGCGGCTCTGGAGCAAGGCGAGGCACAGTGTGGCATCACGCGCACC
ACGGGCGTGGAGATGCTCGAGGAGCCCGACGAGGGCTATCGGCGGCTCGACGGCTCGACATTTGCACGGGAGACG
GGGCTGGAGGGCTTCAAGACAATCGAGGGCGACTCGATGCCCGAGGGCGTGCAGCTAGGGTTTGAGTACCAGACG
TTTTGCATCAACCCGGGCGTCTACTGCCAGTTTCTGGTGCGCCAGCTGCTGGAGGGCGGGGCCAAGACGCTGCAG
AGAGAGCTGGGCAGCGAGTGGGAGGCGTTTGGCGCGGGCGGCGAGGTGCTGTTTGTGGTCAATGCCAGCGGCATG
GGCTTTGGCGACGCTCAGTGCTTCCCCACGCGCGGACAGACTCTGGTCACCAACATGGCGCACGTCAGCAAGACG
GTGACGCGCCAGAACCGCGACGGCAGCTGGGCCTTTTTGGTGCCGCGCTTCATGGGCGGCGGCACCATTGTTGGC
GGCACCAAGGAGGCTCACGACTGGCGCACCGAGCCTGATGCGGCCACGCGGCAGCGGCTGCTGGCTGCTGGCCGA
GAGCTCGAACCCTATGCCTGCGACACGCCGCCGCCGCCAGGCTGGGAGCTGAGCGTCGTGGCCGACGTGGTAGGG
CGGCGCCCGACGCGTGCTGGCGGTCTGAGACTCGACGTCGAGACCGACTTGGAGGGGCGGAGCGTGGTGCATGCC
TATGGCGCAGGAGGCCGAGGCTACGAACTGAGCTGGGGCATTGCCAGCGAGGTGGTTCGCCTGGCCGAGCCGCTA
ATCAATCGCCTGCCAATAGTGGGTGAGCACTAG
Gene >OphauB2|4565
ATGGCCACGGTTGTAGTGATAGGGTATGTGTGCATGGGGCAAAGACTGGAGGCTTGCTGGATGCTTCTTGCTGAT
GGGCTTGCAGGGCAGGCGTCGTTGGACTCTCGACGGCCGTCAAGCTGCAGCGACTTGGTCAAGGGCGCTACGGCA
TTGTGGTGATTGCGCGCGACTGGCCGCCGTCGACTCCGGGAGCAGCTCCATCGCACTCAGCCGACTATGCCTCCA
TGTGGGCAGGAGCCCATGTGCGGCCGATTCCTGCGACGACGGCACAGCTGCGGCGCGAGGCAGCTCTCATGCGAA
GGACTGTGGCCGAGTTTGCGGCTCTGGAGCAAGGCGAGGCACAGTGTGGCATCACGCGCACCACGGGCGTGGAGA
TGCTCGAGGAGCCCGACGAGGGCTATCGGCGGCTCGACGGCTCGACATTTGCACGGGAGACGGGGCTGGAGGGCT
TCAAGACAATCGAGGGCGACTCGATGCCCGAGGGCGTGCAGCTAGGGTTTGAGTACCAGACGTTTTGCATCAACC
CGGGCGTCTACTGCCAGTTTCTGGTGCGCCAGCTGCTGGAGGGCGGGGCCAAGACGCTGCAGAGAGAGCTGGGCA
GCGAGTGGGAGGCGTTTGGCGCGGGCGGCGAGGTGCTGTTTGTGGTCAATGCCAGCGGCATGGGCTTTGGCGACG
CTCAGTGCTTCCCCACGCGCGGACAGACTCTGGTCACCAACATGGCGCACGTCAGCAAGACGGTGACGCGCCAGA
ACCGCGACGGCAGCTGGGCCTTTTTGGTGCCGCGCTTCATGGGCGGCGGCACCATTGTTGGCGGCACCAAGGAGG
CTCACGACTGGCGCACCGAGCCTGATGCGGCCACGCGGCAGCGGCTGCTGGCTGCTGGCCGAGAGCTCGAACCCT
ATGCCTGCGACACGCCGCCGCCGCCAGGCTGGGAGCTGAGCGTCGTGGCCGACGTGGTAGGGCGGCGCCCGACGC
GTGCTGGCGGTCTGAGACTCGACGTCGAGACCGACTTGGAGGGGCGGAGCGTGGTGCATGCCTATGGCGCAGGAG
GCCGAGGCTACGAACTGAGCTGGGGCATTGCCAGCGAGGTGGTTCGCCTGGCCGAGCCGCTAATCAATCGCCTGC
CAATAGTGGGTGAGCACTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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