Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|4559
Gene name
LocationContig_30:107200..108394
Strand-
Gene length (bp)1194
Transcript length (bp)1194
Coding sequence length (bp)1194
Protein length (aa) 398

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13324 GCIP Grap2 and cyclin-D-interacting 5.5E-15 48 219

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q10368|YDBI_SCHPO Uncharacterized protein C22E12.18 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC22E12.18 PE=1 SV=1 36 205 1.0E-07

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 25 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|4559
MARSLYSLLQSALALLNDLKALLAAIQRDPSSAATATIAGSPFDAARDSAALIRAHGTKLALVVITLPWTPSAAA
SIVNALLDGPVSSLFSAVEACSSRHYTTFARKELASRSSRVLDALQQQLLLVRRRFADAERQEQKSTDTVTAILW
EACDNVGRLADMGVAGFMVHKTSQERDLLQDAWDELKSWGDEDSCSDADDDDDDDDDDNDDDNDNDTTDSDTVNT
ATVDNASPTNSPAPQPISSTTAQDLVDSLISQRPISRLDPQGIRPRLEVSLKRLRLVIILYQGALKRRLGTMPAV
LTPLHPPPSSSSALECPVSRLDCLANIFQQLPQRFEDVAAALYSRDAASADQTLAAFCEDALFASQLLKYDWNNK
RDVFAEWLNQFNSEITASFSPA*
Coding >OphauB2|4559
ATGGCGCGGAGCCTCTACTCGCTCCTTCAATCCGCCCTGGCCCTGCTAAACGACCTCAAGGCCCTCCTCGCCGCC
ATTCAGCGCGACCCTTCGTCTGCTGCCACGGCCACAATAGCCGGCAGTCCCTTTGATGCCGCCCGCGACTCTGCA
GCCCTGATCCGCGCCCACGGCACCAAACTTGCCCTCGTTGTCATTACGCTGCCATGGACTCCCTCGGCTGCTGCC
TCGATTGTCAATGCCTTGCTCGATGGGCCCGTGTCGTCTCTCTTCTCGGCTGTTGAGGCCTGCAGCTCTCGCCAC
TACACCACTTTTGCTCGCAAGGAGCTTGCAAGCCGCTCCTCGCGCGTGCTCGATGCCCTTCAGCAGCAACTGCTG
CTGGTTCGGCGCCGCTTTGCCGATGCAGAGCGTCAAGAGCAAAAGAGCACCGACACTGTCACTGCCATTCTGTGG
GAGGCGTGTGATAATGTTGGCCGTCTGGCCGACATGGGAGTTGCCGGCTTCATGGTCCACAAGACGTCGCAGGAG
AGAGACTTGCTCCAGGATGCCTGGGACGAGCTCAAGAGCTGGGGCGATGAAGACTCTTGCAGCGATGCCGATGAC
GACGACGACGACGACGACGACGACAACGACGACGACAACGACAACGACACCACCGACAGTGACACTGTCAATACT
GCCACTGTCGACAATGCCAGCCCAACCAACAGCCCCGCCCCCCAGCCAATCTCGTCTACCACAGCCCAAGACTTG
GTCGACAGCCTCATCTCTCAGCGGCCCATTTCGCGTCTTGACCCACAAGGCATTCGTCCGCGCCTTGAAGTCTCT
CTCAAGCGTTTGCGCCTTGTCATCATACTCTATCAAGGCGCTCTCAAGCGCCGCCTCGGCACCATGCCTGCAGTC
CTCACTCCACTCCATCCTCCGCCCTCTTCTTCGTCAGCCCTGGAATGCCCCGTCTCCCGTCTTGATTGCCTGGCA
AACATCTTTCAACAACTGCCCCAACGCTTCGAGGACGTTGCCGCTGCTCTTTACAGCCGCGACGCCGCCTCGGCC
GATCAGACGCTGGCCGCCTTTTGTGAAGATGCCCTCTTTGCAAGTCAACTACTCAAGTATGACTGGAACAACAAG
CGCGATGTCTTCGCCGAATGGCTCAATCAATTCAACAGTGAGATAACGGCCAGCTTCTCCCCTGCCTGA
Transcript >OphauB2|4559
ATGGCGCGGAGCCTCTACTCGCTCCTTCAATCCGCCCTGGCCCTGCTAAACGACCTCAAGGCCCTCCTCGCCGCC
ATTCAGCGCGACCCTTCGTCTGCTGCCACGGCCACAATAGCCGGCAGTCCCTTTGATGCCGCCCGCGACTCTGCA
GCCCTGATCCGCGCCCACGGCACCAAACTTGCCCTCGTTGTCATTACGCTGCCATGGACTCCCTCGGCTGCTGCC
TCGATTGTCAATGCCTTGCTCGATGGGCCCGTGTCGTCTCTCTTCTCGGCTGTTGAGGCCTGCAGCTCTCGCCAC
TACACCACTTTTGCTCGCAAGGAGCTTGCAAGCCGCTCCTCGCGCGTGCTCGATGCCCTTCAGCAGCAACTGCTG
CTGGTTCGGCGCCGCTTTGCCGATGCAGAGCGTCAAGAGCAAAAGAGCACCGACACTGTCACTGCCATTCTGTGG
GAGGCGTGTGATAATGTTGGCCGTCTGGCCGACATGGGAGTTGCCGGCTTCATGGTCCACAAGACGTCGCAGGAG
AGAGACTTGCTCCAGGATGCCTGGGACGAGCTCAAGAGCTGGGGCGATGAAGACTCTTGCAGCGATGCCGATGAC
GACGACGACGACGACGACGACGACAACGACGACGACAACGACAACGACACCACCGACAGTGACACTGTCAATACT
GCCACTGTCGACAATGCCAGCCCAACCAACAGCCCCGCCCCCCAGCCAATCTCGTCTACCACAGCCCAAGACTTG
GTCGACAGCCTCATCTCTCAGCGGCCCATTTCGCGTCTTGACCCACAAGGCATTCGTCCGCGCCTTGAAGTCTCT
CTCAAGCGTTTGCGCCTTGTCATCATACTCTATCAAGGCGCTCTCAAGCGCCGCCTCGGCACCATGCCTGCAGTC
CTCACTCCACTCCATCCTCCGCCCTCTTCTTCGTCAGCCCTGGAATGCCCCGTCTCCCGTCTTGATTGCCTGGCA
AACATCTTTCAACAACTGCCCCAACGCTTCGAGGACGTTGCCGCTGCTCTTTACAGCCGCGACGCCGCCTCGGCC
GATCAGACGCTGGCCGCCTTTTGTGAAGATGCCCTCTTTGCAAGTCAACTACTCAAGTATGACTGGAACAACAAG
CGCGATGTCTTCGCCGAATGGCTCAATCAATTCAACAGTGAGATAACGGCCAGCTTCTCCCCTGCCTGA
Gene >OphauB2|4559
ATGGCGCGGAGCCTCTACTCGCTCCTTCAATCCGCCCTGGCCCTGCTAAACGACCTCAAGGCCCTCCTCGCCGCC
ATTCAGCGCGACCCTTCGTCTGCTGCCACGGCCACAATAGCCGGCAGTCCCTTTGATGCCGCCCGCGACTCTGCA
GCCCTGATCCGCGCCCACGGCACCAAACTTGCCCTCGTTGTCATTACGCTGCCATGGACTCCCTCGGCTGCTGCC
TCGATTGTCAATGCCTTGCTCGATGGGCCCGTGTCGTCTCTCTTCTCGGCTGTTGAGGCCTGCAGCTCTCGCCAC
TACACCACTTTTGCTCGCAAGGAGCTTGCAAGCCGCTCCTCGCGCGTGCTCGATGCCCTTCAGCAGCAACTGCTG
CTGGTTCGGCGCCGCTTTGCCGATGCAGAGCGTCAAGAGCAAAAGAGCACCGACACTGTCACTGCCATTCTGTGG
GAGGCGTGTGATAATGTTGGCCGTCTGGCCGACATGGGAGTTGCCGGCTTCATGGTCCACAAGACGTCGCAGGAG
AGAGACTTGCTCCAGGATGCCTGGGACGAGCTCAAGAGCTGGGGCGATGAAGACTCTTGCAGCGATGCCGATGAC
GACGACGACGACGACGACGACGACAACGACGACGACAACGACAACGACACCACCGACAGTGACACTGTCAATACT
GCCACTGTCGACAATGCCAGCCCAACCAACAGCCCCGCCCCCCAGCCAATCTCGTCTACCACAGCCCAAGACTTG
GTCGACAGCCTCATCTCTCAGCGGCCCATTTCGCGTCTTGACCCACAAGGCATTCGTCCGCGCCTTGAAGTCTCT
CTCAAGCGTTTGCGCCTTGTCATCATACTCTATCAAGGCGCTCTCAAGCGCCGCCTCGGCACCATGCCTGCAGTC
CTCACTCCACTCCATCCTCCGCCCTCTTCTTCGTCAGCCCTGGAATGCCCCGTCTCCCGTCTTGATTGCCTGGCA
AACATCTTTCAACAACTGCCCCAACGCTTCGAGGACGTTGCCGCTGCTCTTTACAGCCGCGACGCCGCCTCGGCC
GATCAGACGCTGGCCGCCTTTTGTGAAGATGCCCTCTTTGCAAGTCAACTACTCAAGTATGACTGGAACAACAAG
CGCGATGTCTTCGCCGAATGGCTCAATCAATTCAACAGTGAGATAACGGCCAGCTTCTCCCCTGCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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