© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|4539 |
| Gene name | |
| Location | Contig_30:54322..55011 |
| Strand | + |
| Gene length (bp) | 689 |
| Transcript length (bp) | 576 |
| Coding sequence length (bp) | 576 |
| Protein length (aa) | 192 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00472 | RF-1 | RF-1 domain | 1.6E-13 | 63 | 186 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q12322|YO114_YEAST | Putative uncharacterized protein YOL114C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOL114C PE=4 SV=1 | 42 | 186 | 3.0E-15 |
| sp|Q9HDZ3|MUG82_SCHPO | Meiotically up-regulated gene 82 protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mug82 PE=1 SV=1 | 48 | 150 | 4.0E-07 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006415 | translational termination | Yes |
| GO:0003747 | translation release factor activity | Yes |
| GO:0016043 | cellular component organization | No |
| GO:0003676 | nucleic acid binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0022411 | cellular component disassembly | No |
| GO:0090079 | translation regulator activity, nucleic acid binding | No |
| GO:0043933 | protein-containing complex organization | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0071840 | cellular component organization or biogenesis | No |
| GO:0032984 | protein-containing complex disassembly | No |
| GO:0008150 | biological_process | No |
| GO:0008079 | translation termination factor activity | No |
| GO:0008135 | translation factor activity, RNA binding | No |
| GO:0005488 | binding | No |
| GO:0045182 | translation regulator activity | No |
| GO:0003674 | molecular_function | No |
| GO:0009987 | cellular process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|4539 MALHVPRRVLRPWMPRRGLKPLVFARFRRHEAFDARLDHEALAESRSWFEQLDQAQLPKGVTTYARSSGPGGQHV NKTESKAVTAVSVQELQSFLPKSLHIGIRESKYYTASSDSLTFHAQSHRSRGANVEENRRKLMEELVRIYRANTP SPTSCEKKKKHEAIEHKFHASRLKQKKLSSMKKQSRKGAIS* |
| Coding | >OphauB2|4539 ATGGCACTGCACGTGCCGCGTAGAGTCTTGCGGCCATGGATGCCCAGACGAGGGCTCAAGCCCTTGGTATTCGCG CGATTCCGCAGGCACGAGGCCTTTGATGCCAGACTCGATCATGAGGCTCTCGCTGAGTCGCGGTCCTGGTTTGAA CAGCTGGACCAAGCCCAGCTTCCCAAGGGCGTTACCACATATGCCAGATCAAGCGGCCCTGGTGGGCAGCACGTC AACAAGACCGAGTCCAAGGCCGTGACAGCTGTCTCGGTCCAGGAACTGCAATCCTTTCTGCCCAAGTCTCTGCAT ATTGGTATACGCGAATCAAAATACTACACTGCTAGCAGTGACTCTCTCACCTTCCATGCCCAAAGCCACAGGTCC CGTGGCGCAAATGTCGAGGAGAATAGAAGGAAACTCATGGAAGAGCTGGTCCGTATCTATCGAGCCAACACACCA TCGCCCACAAGCTGTGAAAAGAAGAAGAAGCACGAGGCCATTGAACACAAATTCCATGCATCGAGACTGAAGCAG AAGAAGCTCTCTAGCATGAAGAAACAGTCTCGCAAGGGCGCGATATCATAA |
| Transcript | >OphauB2|4539 ATGGCACTGCACGTGCCGCGTAGAGTCTTGCGGCCATGGATGCCCAGACGAGGGCTCAAGCCCTTGGTATTCGCG CGATTCCGCAGGCACGAGGCCTTTGATGCCAGACTCGATCATGAGGCTCTCGCTGAGTCGCGGTCCTGGTTTGAA CAGCTGGACCAAGCCCAGCTTCCCAAGGGCGTTACCACATATGCCAGATCAAGCGGCCCTGGTGGGCAGCACGTC AACAAGACCGAGTCCAAGGCCGTGACAGCTGTCTCGGTCCAGGAACTGCAATCCTTTCTGCCCAAGTCTCTGCAT ATTGGTATACGCGAATCAAAATACTACACTGCTAGCAGTGACTCTCTCACCTTCCATGCCCAAAGCCACAGGTCC CGTGGCGCAAATGTCGAGGAGAATAGAAGGAAACTCATGGAAGAGCTGGTCCGTATCTATCGAGCCAACACACCA TCGCCCACAAGCTGTGAAAAGAAGAAGAAGCACGAGGCCATTGAACACAAATTCCATGCATCGAGACTGAAGCAG AAGAAGCTCTCTAGCATGAAGAAACAGTCTCGCAAGGGCGCGATATCATAA |
| Gene | >OphauB2|4539 ATGGCACTGCACGTGCCGCGTAGAGTCTTGCGGCCATGGATGCCCAGACGAGGGCTCAAGCCCTTGGTATTCGCG CGATTCCGCAGGCACGAGGCCTTTGATGCCAGACTCGATCATGAGGCTCTCGCTGAGTCGCGGTCCTGGTTTGAA CAGCTGGACCAAGCCCAGCTTCCCAAGGGCGTTACCACATATGCCAGATCAAGCGGCCCTGGTGGGCAGCACGTC AACAAGTACGATGCCAGACCCAACAAGACTTTGGCTACAGACTGACGGGCGTGCAAAGGACCGAGTCCAAGGCCG TGACAGCTGTCTCGGTCCAGGAACTGCAATCCTTTCTGCCCAAGTCTCTGCATATTGGTATACGCGAATCAAAAT ACTACACTGCTAGCAGTGACTCTCTCACCTTCCATGCCCAAAGCCACAGGTCCCGTGGCGCAAATGTCGAGGAGA ATAGAAGGAAACTCATGGAAGAGCTGGTCCGTATCTATCGAGCCAACACACCATCGCCCACAAGCTGTGAAAAGA AGAAGAAGCACGAGGCCATGTGAGTTGCATGCCTGCCATGTGCCATAGCCATGGACTCTGACCAATCTCCTTGCC CCAGTGAACACAAATTCCATGCATCGAGACTGAAGCAGAAGAAGCTCTCTAGCATGAAGAAACAGTCTCGCAAGG GCGCGATATCATAA |