© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|4528 |
| Gene name | |
| Location | Contig_30:25165..27717 |
| Strand | - |
| Gene length (bp) | 2552 |
| Transcript length (bp) | 2307 |
| Coding sequence length (bp) | 2307 |
| Protein length (aa) | 769 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04136 | Sec34 | Sec34-like family | 3.1E-44 | 148 | 294 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9Y7Z4|COG3_SCHPO | Conserved oligomeric Golgi complex subunit 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cog3 PE=3 SV=1 | 158 | 687 | 1.0E-14 |
| sp|Q8CI04|COG3_MOUSE | Conserved oligomeric Golgi complex subunit 3 OS=Mus musculus GN=Cog3 PE=1 SV=3 | 143 | 282 | 8.0E-13 |
| sp|Q96JB2|COG3_HUMAN | Conserved oligomeric Golgi complex subunit 3 OS=Homo sapiens GN=COG3 PE=1 SV=3 | 143 | 318 | 1.0E-12 |
| sp|Q29N70|COG3_DROPS | Conserved oligomeric Golgi complex subunit 3 OS=Drosophila pseudoobscura pseudoobscura GN=Cog3 PE=3 SV=1 | 143 | 319 | 2.0E-11 |
| sp|Q961G1|COG3_DROME | Conserved oligomeric Golgi complex subunit 3 OS=Drosophila melanogaster GN=Cog3 PE=1 SV=1 | 139 | 319 | 3.0E-11 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9Y7Z4|COG3_SCHPO | Conserved oligomeric Golgi complex subunit 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cog3 PE=3 SV=1 | 158 | 687 | 1.0E-14 |
| sp|Q8CI04|COG3_MOUSE | Conserved oligomeric Golgi complex subunit 3 OS=Mus musculus GN=Cog3 PE=1 SV=3 | 143 | 282 | 8.0E-13 |
| sp|Q96JB2|COG3_HUMAN | Conserved oligomeric Golgi complex subunit 3 OS=Homo sapiens GN=COG3 PE=1 SV=3 | 143 | 318 | 1.0E-12 |
| sp|Q29N70|COG3_DROPS | Conserved oligomeric Golgi complex subunit 3 OS=Drosophila pseudoobscura pseudoobscura GN=Cog3 PE=3 SV=1 | 143 | 319 | 2.0E-11 |
| sp|Q961G1|COG3_DROME | Conserved oligomeric Golgi complex subunit 3 OS=Drosophila melanogaster GN=Cog3 PE=1 SV=1 | 139 | 319 | 3.0E-11 |
| sp|P40094|COG3_YEAST | Conserved oligomeric Golgi complex subunit 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=COG3 PE=1 SV=1 | 144 | 385 | 4.0E-09 |
| sp|Q16ZN9|COG3_AEDAE | Conserved oligomeric Golgi complex subunit 3 OS=Aedes aegypti GN=Cog3 PE=3 SV=1 | 144 | 319 | 1.0E-08 |
| sp|Q54TT4|COG3_DICDI | Conserved oligomeric Golgi complex subunit 3 OS=Dictyostelium discoideum GN=cog3 PE=3 SV=1 | 171 | 307 | 5.0E-08 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006886 | intracellular protein transport | Yes |
| GO:0005801 | cis-Golgi network | Yes |
| GO:0016020 | membrane | Yes |
| GO:0051641 | cellular localization | No |
| GO:0043229 | intracellular organelle | No |
| GO:0046907 | intracellular transport | No |
| GO:0070727 | cellular macromolecule localization | No |
| GO:0005575 | cellular_component | No |
| GO:0045184 | establishment of protein localization | No |
| GO:0051649 | establishment of localization in cell | No |
| GO:0008150 | biological_process | No |
| GO:0071702 | organic substance transport | No |
| GO:0015031 | protein transport | No |
| GO:0033036 | macromolecule localization | No |
| GO:0051179 | localization | No |
| GO:0043226 | organelle | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0006810 | transport | No |
| GO:0043227 | membrane-bounded organelle | No |
| GO:0071705 | nitrogen compound transport | No |
| GO:0009987 | cellular process | No |
| GO:0043231 | intracellular membrane-bounded organelle | No |
| GO:0051234 | establishment of localization | No |
| GO:0008104 | protein localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 23 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|4528 MYEDSWYSFVPDVASKTQPLQSQSLPHGRTESRLQQPNGIARAQDSLAPLSQALGHGSSSESPPEPQVPRRAASF PCLHRVASTQLTRDGASCAPGHIERGRTRLFEALMLQHQGSMARLVGADEVARDELANETLLLASQQQYLHQQDQ LALTERHLDGLIEEANAALALLTSLSTSFQSVQSQTSSFQSQCQDIISEQHRLEKLVDQVGTDLHYYAYLDIATR RLNAPGASRLVESADLGDLIENIDACIHFMDSHDSYRERDSYLARYNALLAKALHLLDHGFTAHLNKVSLELSRQ MDTLKSSSARHALAYGRFEEIMSGSFYLLPNIQKTVRCAYDEYGRPAEASPRRDVYANSALAMFRTYLQTRDRDL KAMTQHEMDEFQKECKTLSIETACRNYIKQSFEKIDDEDVLFFKIFSVEPTWNNSPDSVLQAIRTVHTSMVHRGH LIPLANCIQSSLNNAKIEAICSVVGWLASEYTVPELDEEESPTSRRFREYAARLLVDHLWTFTDNAFATEITKSI TKAPLTDGSLKMEPAVGGVASSNAHPLVNKAIDLLAMFDRAMPKERSAKNSPVVFSIVRETIHVLQRAESRINSL HNGTDGDLFMVKNLLIIKNELVSLEIGDIRSQAPSMQHFGHIWDRLSPQNWMSFFSGLVSAGGSLWARSGSSVTA KTLTAEDMSEQLDELLRQSIYAFTKRWGSLMNDSRSHKAGSKPIAKLETELEAILDAAFNGQPEVVSKLKEAIEL NAQAQSNAQDEKRGAKRY* |
| Coding | >OphauB2|4528 ATGTACGAAGACTCGTGGTACAGTTTCGTGCCCGATGTTGCCAGCAAAACACAACCACTCCAAAGCCAATCGCTG CCCCACGGTCGAACCGAATCTCGGCTTCAGCAGCCCAACGGCATTGCCAGAGCCCAAGATTCTCTTGCGCCCTTG TCCCAAGCTCTTGGTCATGGCAGCAGCTCTGAATCACCTCCCGAGCCACAAGTGCCTCGGCGCGCCGCCTCTTTC CCCTGCTTGCATCGTGTGGCGTCGACGCAATTGACAAGGGATGGAGCCTCGTGCGCCCCTGGGCACATAGAGCGA GGCCGCACCAGGCTGTTCGAGGCCCTGATGCTGCAGCATCAAGGCTCCATGGCCAGACTTGTCGGCGCAGACGAG GTAGCCCGTGACGAGTTGGCTAATGAGACATTGCTGCTAGCCAGCCAACAGCAGTATCTCCACCAGCAAGACCAA CTCGCCCTCACCGAGCGCCATCTCGACGGCCTCATTGAAGAAGCCAATGCGGCCCTGGCGCTTCTCACTTCTCTT TCCACCTCTTTTCAGTCGGTCCAGTCTCAAACGTCGTCCTTCCAGTCCCAGTGCCAAGACATCATCTCGGAGCAG CATCGCCTAGAGAAGCTTGTCGACCAAGTTGGCACCGATTTACACTACTATGCCTACCTGGACATTGCCACACGT CGTCTCAATGCTCCTGGAGCCAGCCGCCTGGTTGAGTCGGCGGACCTGGGCGACTTGATTGAGAACATTGATGCC TGTATTCACTTCATGGACTCCCACGACTCTTACCGCGAGCGTGACTCATACCTGGCAAGATACAATGCCCTCCTG GCAAAGGCTTTGCATCTGCTCGATCATGGCTTCACTGCTCATTTGAACAAGGTTTCACTCGAGCTTTCCCGCCAA ATGGATACCCTCAAGTCCAGCTCAGCCCGCCATGCCCTGGCTTATGGCCGTTTCGAGGAAATCATGTCTGGCTCG TTTTATCTGTTACCCAATATTCAAAAAACAGTGCGCTGTGCCTACGACGAATATGGCAGACCAGCCGAAGCCTCT CCTCGCAGAGATGTATACGCAAATTCAGCTCTAGCCATGTTTCGCACCTATCTTCAGACTAGGGACCGAGATCTA AAGGCCATGACACAACACGAAATGGACGAATTTCAAAAAGAATGCAAAACTCTTTCTATCGAGACTGCATGCAGA AACTACATTAAGCAGTCATTTGAAAAGATTGACGATGAAGACGTCTTGTTTTTCAAGATTTTCAGCGTAGAACCC ACATGGAACAACTCTCCAGATTCGGTTTTGCAAGCCATTCGCACTGTCCACACATCCATGGTCCACCGGGGACAC TTGATACCACTTGCCAATTGCATACAGAGCTCGTTGAATAATGCTAAAATCGAAGCTATCTGCAGCGTGGTGGGA TGGCTGGCCAGCGAATACACAGTGCCAGAATTAGATGAGGAAGAGTCACCAACGAGTAGGAGATTTCGCGAGTAC GCAGCACGCCTTCTAGTGGACCATTTGTGGACATTTACAGATAACGCTTTTGCCACGGAGATTACCAAGTCCATC ACCAAGGCTCCGTTGACGGATGGAAGCCTCAAAATGGAGCCTGCTGTTGGGGGGGTGGCGTCGTCAAATGCACAT CCTCTGGTAAACAAGGCAATCGATTTGCTGGCCATGTTTGATCGAGCCATGCCAAAAGAACGGTCGGCCAAGAAC AGCCCAGTTGTTTTCAGTATTGTGCGAGAGACGATTCACGTGTTACAGCGAGCAGAATCTAGGATCAATTCGCTT CACAACGGGACAGACGGCGATTTATTCATGGTAAAGAACCTTCTCATTATCAAGAATGAGCTCGTGTCCCTGGAA ATTGGTGATATCCGGAGTCAGGCGCCCTCGATGCAGCATTTTGGACACATATGGGATAGACTTAGTCCGCAAAAC TGGATGAGCTTCTTCAGCGGCCTTGTTAGCGCCGGCGGTTCTCTATGGGCGCGCAGTGGGTCGTCTGTAACGGCC AAGACGCTGACAGCAGAGGATATGAGCGAACAACTGGATGAGCTGCTGCGACAATCTATTTACGCCTTTACCAAG CGATGGGGCAGTTTGATGAACGACTCGCGGAGCCACAAGGCAGGGTCCAAGCCCATTGCCAAGCTCGAGACGGAA TTGGAGGCGATATTGGATGCTGCATTCAACGGGCAGCCTGAGGTTGTATCCAAGCTCAAGGAAGCAATTGAGCTC AATGCACAAGCACAGAGCAATGCGCAAGATGAGAAGAGGGGAGCCAAGCGATACTGA |
| Transcript | >OphauB2|4528 ATGTACGAAGACTCGTGGTACAGTTTCGTGCCCGATGTTGCCAGCAAAACACAACCACTCCAAAGCCAATCGCTG CCCCACGGTCGAACCGAATCTCGGCTTCAGCAGCCCAACGGCATTGCCAGAGCCCAAGATTCTCTTGCGCCCTTG TCCCAAGCTCTTGGTCATGGCAGCAGCTCTGAATCACCTCCCGAGCCACAAGTGCCTCGGCGCGCCGCCTCTTTC CCCTGCTTGCATCGTGTGGCGTCGACGCAATTGACAAGGGATGGAGCCTCGTGCGCCCCTGGGCACATAGAGCGA GGCCGCACCAGGCTGTTCGAGGCCCTGATGCTGCAGCATCAAGGCTCCATGGCCAGACTTGTCGGCGCAGACGAG GTAGCCCGTGACGAGTTGGCTAATGAGACATTGCTGCTAGCCAGCCAACAGCAGTATCTCCACCAGCAAGACCAA CTCGCCCTCACCGAGCGCCATCTCGACGGCCTCATTGAAGAAGCCAATGCGGCCCTGGCGCTTCTCACTTCTCTT TCCACCTCTTTTCAGTCGGTCCAGTCTCAAACGTCGTCCTTCCAGTCCCAGTGCCAAGACATCATCTCGGAGCAG CATCGCCTAGAGAAGCTTGTCGACCAAGTTGGCACCGATTTACACTACTATGCCTACCTGGACATTGCCACACGT CGTCTCAATGCTCCTGGAGCCAGCCGCCTGGTTGAGTCGGCGGACCTGGGCGACTTGATTGAGAACATTGATGCC TGTATTCACTTCATGGACTCCCACGACTCTTACCGCGAGCGTGACTCATACCTGGCAAGATACAATGCCCTCCTG GCAAAGGCTTTGCATCTGCTCGATCATGGCTTCACTGCTCATTTGAACAAGGTTTCACTCGAGCTTTCCCGCCAA ATGGATACCCTCAAGTCCAGCTCAGCCCGCCATGCCCTGGCTTATGGCCGTTTCGAGGAAATCATGTCTGGCTCG TTTTATCTGTTACCCAATATTCAAAAAACAGTGCGCTGTGCCTACGACGAATATGGCAGACCAGCCGAAGCCTCT CCTCGCAGAGATGTATACGCAAATTCAGCTCTAGCCATGTTTCGCACCTATCTTCAGACTAGGGACCGAGATCTA AAGGCCATGACACAACACGAAATGGACGAATTTCAAAAAGAATGCAAAACTCTTTCTATCGAGACTGCATGCAGA AACTACATTAAGCAGTCATTTGAAAAGATTGACGATGAAGACGTCTTGTTTTTCAAGATTTTCAGCGTAGAACCC ACATGGAACAACTCTCCAGATTCGGTTTTGCAAGCCATTCGCACTGTCCACACATCCATGGTCCACCGGGGACAC TTGATACCACTTGCCAATTGCATACAGAGCTCGTTGAATAATGCTAAAATCGAAGCTATCTGCAGCGTGGTGGGA TGGCTGGCCAGCGAATACACAGTGCCAGAATTAGATGAGGAAGAGTCACCAACGAGTAGGAGATTTCGCGAGTAC GCAGCACGCCTTCTAGTGGACCATTTGTGGACATTTACAGATAACGCTTTTGCCACGGAGATTACCAAGTCCATC ACCAAGGCTCCGTTGACGGATGGAAGCCTCAAAATGGAGCCTGCTGTTGGGGGGGTGGCGTCGTCAAATGCACAT CCTCTGGTAAACAAGGCAATCGATTTGCTGGCCATGTTTGATCGAGCCATGCCAAAAGAACGGTCGGCCAAGAAC AGCCCAGTTGTTTTCAGTATTGTGCGAGAGACGATTCACGTGTTACAGCGAGCAGAATCTAGGATCAATTCGCTT CACAACGGGACAGACGGCGATTTATTCATGGTAAAGAACCTTCTCATTATCAAGAATGAGCTCGTGTCCCTGGAA ATTGGTGATATCCGGAGTCAGGCGCCCTCGATGCAGCATTTTGGACACATATGGGATAGACTTAGTCCGCAAAAC TGGATGAGCTTCTTCAGCGGCCTTGTTAGCGCCGGCGGTTCTCTATGGGCGCGCAGTGGGTCGTCTGTAACGGCC AAGACGCTGACAGCAGAGGATATGAGCGAACAACTGGATGAGCTGCTGCGACAATCTATTTACGCCTTTACCAAG CGATGGGGCAGTTTGATGAACGACTCGCGGAGCCACAAGGCAGGGTCCAAGCCCATTGCCAAGCTCGAGACGGAA TTGGAGGCGATATTGGATGCTGCATTCAACGGGCAGCCTGAGGTTGTATCCAAGCTCAAGGAAGCAATTGAGCTC AATGCACAAGCACAGAGCAATGCGCAAGATGAGAAGAGGGGAGCCAAGCGATACTGA |
| Gene | >OphauB2|4528 ATGTACGAAGACTCGTGGTACAGTTTCGTGCCCGATGTTGCCAGCAAAACACAACCACTCCAAAGCCAATCGCTG CCCCACGGTCGAACCGAATCTCGGCTTCAGCAGCCCAACGTTGGTCCACCTGTCTTTTGCGCGGCTTGGGCAGCA GCTTACAGTAGTCGCTGCAGGGCATTGCCAGAGCCCAAGATTCTCTTGCGCCCTTGTCCCAAGCTCTTGGTCATG GCAGCAGCTCTGAATCACCTCCCGAGCCACAAGTGCCTCGGCGCGCCGCCTCTTTCCCCTGCTTGCATCGTGTGG CGTCGACGCAATTGACAAGGGATGGAGCCTCGTGCGCCCCTGGGCACATAGAGCGAGGCCGCACCAGGCTGTTCG AGGCCCTGATGCTGCAGCATCAAGGCTCCATGGCCAGACTTGTCGGCGCAGACGAGGTAGCCCGTGACGAGTTGG CTAATGAGACATTGCTGCTAGCCAGCCAACAGCAGTATCTGTATGGACTGAGAGCTCCCCGGCCATGAGACTGAT GAAGCTAACCTTGGCCAGCCACCAGCAAGACCAACTCGCCCTCACCGAGCGCCATCTCGACGGCCTCATTGAAGA AGCCAATGCGGCCCTGGCGCTTCTCACTTCTCTTTCCACCTCTTTTCAGTCGGTCCAGTCTCAAACGTCGTCCTT CCAGTCCCAGTGCCAAGACATCATCTCGGAGCAGCATCGCCTAGAGAAGCTTGTCGACCAAGTTGGCACCGATTT ACACTACTATGCCTACCTGGACATTGCCACACGTCGTCTCAATGCTCCTGGAGCCAGCCGCCTGGTTGAGTCGGC GGACCTGGGCGACTTGATTGAGAACATTGATGCCTGTATTCACTTCATGGACTCCCACGTGCGTGTAGCTTTGTC TTGTCTCGGCTTGTCTGTGCTCATGGCGACTGACCCAATCCCTGTTGCAACAGGACTCTTACCGCGAGCGTGACT CATACCTGGCAAGATACAATGCCCTCCTGGCAAAGGCTTTGCATCTGCTCGATCATGGCTTCACTGCTCATTTGA ACAAGGTTTCACTCGAGCTTTCCCGCCAAATGGATACCCTCAAGTCCAGCTCAGCCCGCCATGCCCTGGCTTATG GCCGTTTCGAGGAAATCATGTCTGGCTCGTTTTATCTGTTACCCAATATTCAAAAAACAGTGCGCTGTGCCTACG ACGAATATGGCAGACCAGCCGAAGCCTCTCCTCGCAGAGATGTATACGCAAATTCAGCTCTAGCCATGTTTCGCA CCTATCTTCAGACTAGGGACCGAGATCTAAAGGCCATGACACAACACGAAATGGACGAATTTCAAAAAGAATGCA AAACTCTTTCTATCGAGACTGCATGCAGAAACTACATTAAGCAGTCATTTGAAAAGATTGACGATGAAGACGTCT TGTTTTTCAAGATTTTCAGCGTAGAACCCACATGGAACAACTCTCCAGATTCGGTTTTGCAAGCCATTCGCACTG TCCACACATCCATGGTCCACCGGGGACACTTGATACCACTTGCCAATTGCATACAGAGCTCGTTGAATAATGCTA AAATCGAAGCTATCTGCAGCGTGGTGGGATGGCTGGCCAGCGAATACACAGTGCCAGAATTAGATGAGGAAGAGT CACCAACGAGTAGGAGATTTCGCGAGTACGCAGCACGCCTTCTAGTGGACCATTTGTGGACATTTACAGATAACG CTTTTGCCACGGAGATTACCAAGTCCATCACCAAGGCTCCGTTGACGGATGGAAGCCTCAAAATGGAGCCTGCTG TTGGGGGGGTGGCGTCGTCAAATGCACATCCTCTGGTAAACAAGGCAATCGATTTGCTGGCCATGTTTGATCGAG CCATGCCAAAAGAACGGTCGGTGAGTTGTGTTGTGTGTCTTGCAAATATTCGTCTTGAACAGCGACTTAGACTAA TATTGATTTAGGCCAAGAACAGCCCAGTTGTTTTCAGTATTGTGCGAGAGACGATTCACGTGTTACAGCGAGCAG AATCTAGGATCAATTCGCTTCACAACGGGACAGACGGCGATTTATTCATGGTAAAGAACCTTCTCATTATCAAGA ATGAGCTCGTGTCCCTGGAAATTGGTGATATCCGGAGTCAGGCGCCCTCGATGCAGCATTTTGGACACATATGGG ATAGACTTAGTCCGCAAAACTGGATGAGCTTCTTCAGCGGCCTTGTTAGCGCCGGCGGTTCTCTATGGGCGCGCA GTGGGTCGTCTGTAACGGCCAAGACGCTGACAGCAGAGGATATGAGCGAACAACTGGATGAGCTGCTGCGACAAT CTATTTACGCCTTTACCAAGCGATGGGGCAGTTTGATGAACGACTCGCGGAGCCACAAGGCAGGGTCCAAGCCCA TTGCCAAGCTCGAGACGGAATTGGAGGCGATATTGGATGCTGCATTCAACGGGCAGCCTGAGGTTGTATCCAAGC TCAAGGAAGCAATTGAGCTCAATGCACAAGCACAGAGCAATGCGCAAGATGAGAAGAGGGGAGCCAAGCGATACT GA |