Protein ID | OphauB2|4487 |
Gene name | |
Location | Contig_3:286997..288239 |
Strand | + |
Gene length (bp) | 1242 |
Transcript length (bp) | 1089 |
Coding sequence length (bp) | 1089 |
Protein length (aa) | 363 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00615 | RGS | Regulator of G protein signaling domain | 3.3E-10 | 40 | 239 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q9P7S8|RAX1_SCHPO | Protein rax1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rax1 PE=3 SV=1 | 22 | 362 | 7.0E-51 |
sp|Q08760|RAX1_YEAST | Bud site selection protein RAX1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RAX1 PE=1 SV=1 | 18 | 362 | 2.0E-35 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 250 | 272 | 22 |
2 | 284 | 303 | 19 |
3 | 336 | 358 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 1644 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauB2|4487 MTEHEMSSPQSPLSDPTRNRLPTLFEVLSRRTLPPVDLFSFYIYMRDQQRSVDYLDFWLDVAQHMSLCRHYVREL RRSVLVATPDMEKTGSKRSSTILENIGDIEPRMAGPSMYATDKEKSQDAQMSAFLREDQTHESPASGSGAVRPSP QFSNSRDVTDSNSPAHTVARQDIRASAEKILYTFLLPGAEREITLPGSITQDVTTAIEDHGRDDPEVFDVAKDYV FQAMERDAFPGFLRMKALGNLIPPTLVMRLIVGLVSLFSAFWAAFVLIFLDKSRATKCWLILPFTVGVYFLASYQ YSLDPIIAMIGFSEYTPFNFSRIREPYVRRLLAKRAAMVLAITILIVAALCVLFILVPGKRL* |
Coding | >OphauB2|4487 ATGACTGAACACGAAATGTCGTCACCTCAGTCGCCGCTGTCGGATCCGACGAGAAATCGACTGCCCACGCTCTTT GAAGTATTGAGTCGTCGCACTCTTCCGCCAGTCGATTTATTTTCCTTTTATATTTATATGCGTGACCAGCAGCGG TCGGTCGACTATCTAGACTTTTGGCTCGATGTAGCCCAACACATGTCCTTGTGCCGCCACTATGTGCGCGAGCTA CGACGGTCTGTTCTCGTGGCCACGCCTGATATGGAAAAGACGGGCTCTAAGCGATCCTCGACAATACTGGAAAAC ATTGGCGATATCGAGCCCCGCATGGCCGGCCCTTCAATGTACGCGACAGACAAGGAAAAGAGTCAAGATGCTCAA ATGTCTGCCTTTCTCCGCGAAGATCAAACTCACGAGTCACCTGCAAGCGGTTCTGGTGCCGTTCGACCAAGTCCG CAATTTAGTAATTCGCGCGACGTGACCGATTCCAACTCTCCCGCTCACACAGTCGCGCGTCAAGATATTCGAGCC TCGGCTGAGAAGATTTTGTACACGTTTCTCCTGCCTGGAGCAGAGCGCGAAATCACGCTTCCAGGATCCATTACA CAGGACGTTACCACTGCCATTGAGGACCATGGACGCGACGACCCAGAGGTATTTGATGTGGCCAAGGACTATGTC TTTCAGGCCATGGAACGCGATGCCTTTCCTGGATTTTTACGCATGAAGGCACTGGGCAACTTGATTCCTCCGACG CTTGTTATGCGCCTGATTGTCGGACTCGTCTCGCTATTTAGTGCCTTTTGGGCAGCCTTTGTTCTCATCTTCCTC GACAAGTCGCGTGCTACCAAGTGCTGGCTAATACTGCCCTTTACTGTTGGCGTCTATTTCCTGGCCTCGTATCAA TACTCTCTGGACCCAATCATTGCCATGATTGGCTTTAGCGAGTACACGCCATTCAACTTTTCGCGGATAAGGGAG CCATATGTCCGACGTCTGTTGGCCAAGCGAGCCGCCATGGTTTTGGCTATTACGATACTCATTGTCGCCGCCCTA TGTGTCCTCTTTATCCTCGTGCCTGGAAAGAGACTCTAG |
Transcript | >OphauB2|4487 ATGACTGAACACGAAATGTCGTCACCTCAGTCGCCGCTGTCGGATCCGACGAGAAATCGACTGCCCACGCTCTTT GAAGTATTGAGTCGTCGCACTCTTCCGCCAGTCGATTTATTTTCCTTTTATATTTATATGCGTGACCAGCAGCGG TCGGTCGACTATCTAGACTTTTGGCTCGATGTAGCCCAACACATGTCCTTGTGCCGCCACTATGTGCGCGAGCTA CGACGGTCTGTTCTCGTGGCCACGCCTGATATGGAAAAGACGGGCTCTAAGCGATCCTCGACAATACTGGAAAAC ATTGGCGATATCGAGCCCCGCATGGCCGGCCCTTCAATGTACGCGACAGACAAGGAAAAGAGTCAAGATGCTCAA ATGTCTGCCTTTCTCCGCGAAGATCAAACTCACGAGTCACCTGCAAGCGGTTCTGGTGCCGTTCGACCAAGTCCG CAATTTAGTAATTCGCGCGACGTGACCGATTCCAACTCTCCCGCTCACACAGTCGCGCGTCAAGATATTCGAGCC TCGGCTGAGAAGATTTTGTACACGTTTCTCCTGCCTGGAGCAGAGCGCGAAATCACGCTTCCAGGATCCATTACA CAGGACGTTACCACTGCCATTGAGGACCATGGACGCGACGACCCAGAGGTATTTGATGTGGCCAAGGACTATGTC TTTCAGGCCATGGAACGCGATGCCTTTCCTGGATTTTTACGCATGAAGGCACTGGGCAACTTGATTCCTCCGACG CTTGTTATGCGCCTGATTGTCGGACTCGTCTCGCTATTTAGTGCCTTTTGGGCAGCCTTTGTTCTCATCTTCCTC GACAAGTCGCGTGCTACCAAGTGCTGGCTAATACTGCCCTTTACTGTTGGCGTCTATTTCCTGGCCTCGTATCAA TACTCTCTGGACCCAATCATTGCCATGATTGGCTTTAGCGAGTACACGCCATTCAACTTTTCGCGGATAAGGGAG CCATATGTCCGACGTCTGTTGGCCAAGCGAGCCGCCATGGTTTTGGCTATTACGATACTCATTGTCGCCGCCCTA TGTGTCCTCTTTATCCTCGTGCCTGGAAAGAGACTCTAG |
Gene | >OphauB2|4487 ATGACTGAACACGAAATGTCGTCACCTCAGTCGCCGCTGTCGGATCCGACGAGAAATCGACTGCCCACGCTCTTT GAAGTATTGAGTCGTCGCACTCTTCCGCCAGTCGATTTATTTTCCTTTTATATTTATATGCGTGACCAGCAGCGG TCGGTCGACTATCTAGACTTTTGGTGCGTCACCTGGCTCGCTGCTACTTTACTTGTTGGCACTTGTGGGCAGACA GTGTACTGACTTGCCTTGGTTTGCAGGCTCGATGTAGCCCAACACATGTCCTTGTGCCGCCACTATGTGCGCGAG CTACGACGGTCTGTTCTCGTGGCCACGCCTGATATGGAAAAGACGGGCTCTAAGCGATCCTCGACAATACTGGAA AACATTGGCGATATCGAGCCCCGCATGGCCGGCCCTTCAATGTACGCGACAGACAAGGAAAAGAGTCAAGATGCT CAAATGTCTGCCTTTCTCCGCGAAGATCAAACTCACGAGTCACCTGCAAGCGGTTCTGGTGCCGTTCGACCAAGT CCGCAATTTAGTAATTCGCGCGACGTGACCGATTCCAACTCTCCCGCTCACACAGTCGCGCGTCAAGATATTCGA GCCTCGGCTGAGAAGATTTTGTACACGTTTCTCCTGCCTGGAGCAGAGCGCGAAATCACGCTTCCAGGATCCATT ACACAGGACGTTACCACTGCCATTGAGGACCATGGACGCGACGACCCAGAGGTATTTGATGTGGCCAAGGACTAT GTCTTTCAGGCCATGGAACGCGATGCCTTTCCTGGATTTTTACGCATGAAGGCACTGGGCAACTTGATTCCTCCG ACGCTTGTTATGCGCCTGATTGTCGGACTCGTCTCGCTATTTAGTGCCTTTTGGGCAGCCTTTGTTCTCATCTTC CTCGACAAGTCGCGTGCTACCAAGTGCTGGGTAAGTTGCTTCTATTCTCGGCCATTTTGAGAGTGGACAAATAGA CCTGGAAATACTAACAAGAGCCACGCAAAGCTAATACTGCCCTTTACTGTTGGCGTCTATTTCCTGGCCTCGTAT CAATACTCTCTGGACCCAATCATTGCCATGATTGGCTTTAGCGAGTACACGCCATTCAACTTTTCGCGGATAAGG GAGCCATATGTCCGACGTCTGTTGGCCAAGCGAGCCGCCATGGTTTTGGCTATTACGATACTCATTGTCGCCGCC CTATGTGTCCTCTTTATCCTCGTGCCTGGAAAGAGACTCTAG |