Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|4451
Gene name
LocationContig_3:186908..188471
Strand-
Gene length (bp)1563
Transcript length (bp)1563
Coding sequence length (bp)1563
Protein length (aa) 521

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00018 SH3_1 SH3 domain 1.1E-08 316 362
PF07653 SH3_2 Variant SH3 domain 2.6E-05 315 367

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q12163|NBP2_YEAST NAP1-binding protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NBP2 PE=1 SV=1 260 370 7.0E-17
sp|Q9US59|SKB5_SCHPO Shk1 kinase-binding protein 5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=skb5 PE=1 SV=1 252 368 2.0E-07

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0003674 molecular_function No
GO:0005488 binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 34 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|4451
MPESTSPASTPTTDSFSLPQHLSSSALPPTADMTPTMTATTTQWRSSNLARSMSHASKERLSHYSTGSAPSKSPP
SSQHLHLLTSTLSYTCVRDFAYPLSHPMHHGPPPPHPSSPPSGMTTPVSESQRLSDPPASFEQRMPWDSWTADGF
SRSCDAPPFQFGDGPPYSEDEDLQSPVVATRHRKHKSNSASLNTDRPRSGRGADAQPSHVLDSSNYDSERGYLVH
RSGDGSERYYVNQGGEANGPGGELVTYPPDHARHSRAFHFAQQLGGNEGYASDDYSSPSSPGCHDADQSRYSRDY
QFTITSPDEEFHGKAVALFDFERENENELPLVEGQIIWVSYRHGQGWLVAEDPKTQENGLVPEEYVRLLRDIEGG
MNSLTGQLGDGSGSPHEAGTPTQTEHGVPEGHHRNISNTTNGYHQPVVSIFSTSSKDLNPYPTEQLGIQAGQTPP
QVVHYHGQRGGSQANTPTLSQHSDLGALRRGSQDSCNRDEAENSSATEESGTKAASSAAQTAEAKTEANR*
Coding >OphauB2|4451
ATGCCCGAGTCCACGTCGCCCGCCTCCACGCCCACCACGGATTCCTTTTCCTTGCCTCAACATCTTAGCTCTTCA
GCCCTGCCGCCGACTGCCGACATGACGCCGACAATGACGGCCACCACGACGCAATGGCGCTCCAGCAATCTGGCC
CGTTCCATGTCGCACGCCTCCAAGGAACGATTGTCGCACTACTCGACGGGCTCGGCGCCTTCAAAATCACCTCCC
TCGTCACAGCATCTCCACCTTCTGACCTCGACCCTCTCCTATACTTGCGTGCGCGATTTCGCATACCCCCTATCT
CATCCTATGCATCATGGCCCTCCTCCTCCCCATCCTTCTAGTCCACCCTCGGGAATGACGACGCCCGTCAGCGAG
TCCCAGAGGCTTTCTGACCCCCCAGCATCCTTCGAGCAGAGGATGCCTTGGGATTCCTGGACCGCCGATGGCTTC
AGCCGCTCATGCGACGCTCCTCCCTTCCAGTTTGGCGATGGCCCCCCATATAGCGAGGATGAAGACCTTCAAAGC
CCCGTCGTTGCCACTCGTCATCGCAAACACAAGTCTAATTCTGCGAGCCTCAACACTGATCGCCCAAGAAGCGGG
CGCGGCGCCGATGCGCAACCCTCACATGTTCTCGATTCGTCAAACTATGACAGCGAGAGGGGTTATCTTGTCCAT
CGAAGCGGTGACGGGAGCGAACGATACTATGTCAATCAAGGGGGCGAGGCCAATGGGCCTGGCGGCGAACTTGTC
ACATACCCCCCCGATCATGCCAGACACAGCCGCGCATTCCACTTTGCTCAGCAACTAGGCGGCAACGAGGGCTAT
GCATCCGATGACTACAGCTCGCCATCTTCCCCCGGCTGCCACGACGCCGACCAATCTCGCTACTCTCGAGATTAT
CAGTTCACAATAACATCTCCCGACGAAGAGTTTCATGGCAAAGCAGTCGCGCTCTTTGACTTTGAACGCGAAAAC
GAAAACGAGCTTCCCCTGGTTGAGGGCCAAATCATATGGGTGTCGTATCGCCATGGCCAAGGCTGGCTGGTGGCT
GAGGATCCCAAGACACAGGAGAATGGTCTGGTGCCCGAGGAATATGTCAGGTTGCTGCGTGACATTGAGGGAGGC
ATGAACAGCCTCACAGGCCAGTTGGGCGATGGCTCTGGCTCGCCCCACGAGGCCGGCACGCCCACCCAAACAGAA
CATGGCGTCCCAGAGGGCCACCATCGAAATATCAGCAACACGACCAATGGCTACCACCAGCCTGTCGTGTCAATT
TTTTCAACATCAAGCAAGGACTTGAATCCATATCCGACAGAGCAGCTGGGCATTCAAGCTGGACAGACACCACCC
CAAGTCGTTCATTACCATGGGCAAAGGGGAGGCAGCCAAGCAAATACTCCCACGCTTTCTCAGCACAGCGATTTG
GGCGCGTTGAGAAGAGGAAGCCAGGACTCTTGCAATCGAGATGAGGCAGAGAATTCCTCAGCTACAGAAGAATCA
GGAACAAAGGCGGCATCATCTGCCGCACAGACGGCCGAAGCAAAGACCGAGGCTAATCGGTGA
Transcript >OphauB2|4451
ATGCCCGAGTCCACGTCGCCCGCCTCCACGCCCACCACGGATTCCTTTTCCTTGCCTCAACATCTTAGCTCTTCA
GCCCTGCCGCCGACTGCCGACATGACGCCGACAATGACGGCCACCACGACGCAATGGCGCTCCAGCAATCTGGCC
CGTTCCATGTCGCACGCCTCCAAGGAACGATTGTCGCACTACTCGACGGGCTCGGCGCCTTCAAAATCACCTCCC
TCGTCACAGCATCTCCACCTTCTGACCTCGACCCTCTCCTATACTTGCGTGCGCGATTTCGCATACCCCCTATCT
CATCCTATGCATCATGGCCCTCCTCCTCCCCATCCTTCTAGTCCACCCTCGGGAATGACGACGCCCGTCAGCGAG
TCCCAGAGGCTTTCTGACCCCCCAGCATCCTTCGAGCAGAGGATGCCTTGGGATTCCTGGACCGCCGATGGCTTC
AGCCGCTCATGCGACGCTCCTCCCTTCCAGTTTGGCGATGGCCCCCCATATAGCGAGGATGAAGACCTTCAAAGC
CCCGTCGTTGCCACTCGTCATCGCAAACACAAGTCTAATTCTGCGAGCCTCAACACTGATCGCCCAAGAAGCGGG
CGCGGCGCCGATGCGCAACCCTCACATGTTCTCGATTCGTCAAACTATGACAGCGAGAGGGGTTATCTTGTCCAT
CGAAGCGGTGACGGGAGCGAACGATACTATGTCAATCAAGGGGGCGAGGCCAATGGGCCTGGCGGCGAACTTGTC
ACATACCCCCCCGATCATGCCAGACACAGCCGCGCATTCCACTTTGCTCAGCAACTAGGCGGCAACGAGGGCTAT
GCATCCGATGACTACAGCTCGCCATCTTCCCCCGGCTGCCACGACGCCGACCAATCTCGCTACTCTCGAGATTAT
CAGTTCACAATAACATCTCCCGACGAAGAGTTTCATGGCAAAGCAGTCGCGCTCTTTGACTTTGAACGCGAAAAC
GAAAACGAGCTTCCCCTGGTTGAGGGCCAAATCATATGGGTGTCGTATCGCCATGGCCAAGGCTGGCTGGTGGCT
GAGGATCCCAAGACACAGGAGAATGGTCTGGTGCCCGAGGAATATGTCAGGTTGCTGCGTGACATTGAGGGAGGC
ATGAACAGCCTCACAGGCCAGTTGGGCGATGGCTCTGGCTCGCCCCACGAGGCCGGCACGCCCACCCAAACAGAA
CATGGCGTCCCAGAGGGCCACCATCGAAATATCAGCAACACGACCAATGGCTACCACCAGCCTGTCGTGTCAATT
TTTTCAACATCAAGCAAGGACTTGAATCCATATCCGACAGAGCAGCTGGGCATTCAAGCTGGACAGACACCACCC
CAAGTCGTTCATTACCATGGGCAAAGGGGAGGCAGCCAAGCAAATACTCCCACGCTTTCTCAGCACAGCGATTTG
GGCGCGTTGAGAAGAGGAAGCCAGGACTCTTGCAATCGAGATGAGGCAGAGAATTCCTCAGCTACAGAAGAATCA
GGAACAAAGGCGGCATCATCTGCCGCACAGACGGCCGAAGCAAAGACCGAGGCTAATCGGTGA
Gene >OphauB2|4451
ATGCCCGAGTCCACGTCGCCCGCCTCCACGCCCACCACGGATTCCTTTTCCTTGCCTCAACATCTTAGCTCTTCA
GCCCTGCCGCCGACTGCCGACATGACGCCGACAATGACGGCCACCACGACGCAATGGCGCTCCAGCAATCTGGCC
CGTTCCATGTCGCACGCCTCCAAGGAACGATTGTCGCACTACTCGACGGGCTCGGCGCCTTCAAAATCACCTCCC
TCGTCACAGCATCTCCACCTTCTGACCTCGACCCTCTCCTATACTTGCGTGCGCGATTTCGCATACCCCCTATCT
CATCCTATGCATCATGGCCCTCCTCCTCCCCATCCTTCTAGTCCACCCTCGGGAATGACGACGCCCGTCAGCGAG
TCCCAGAGGCTTTCTGACCCCCCAGCATCCTTCGAGCAGAGGATGCCTTGGGATTCCTGGACCGCCGATGGCTTC
AGCCGCTCATGCGACGCTCCTCCCTTCCAGTTTGGCGATGGCCCCCCATATAGCGAGGATGAAGACCTTCAAAGC
CCCGTCGTTGCCACTCGTCATCGCAAACACAAGTCTAATTCTGCGAGCCTCAACACTGATCGCCCAAGAAGCGGG
CGCGGCGCCGATGCGCAACCCTCACATGTTCTCGATTCGTCAAACTATGACAGCGAGAGGGGTTATCTTGTCCAT
CGAAGCGGTGACGGGAGCGAACGATACTATGTCAATCAAGGGGGCGAGGCCAATGGGCCTGGCGGCGAACTTGTC
ACATACCCCCCCGATCATGCCAGACACAGCCGCGCATTCCACTTTGCTCAGCAACTAGGCGGCAACGAGGGCTAT
GCATCCGATGACTACAGCTCGCCATCTTCCCCCGGCTGCCACGACGCCGACCAATCTCGCTACTCTCGAGATTAT
CAGTTCACAATAACATCTCCCGACGAAGAGTTTCATGGCAAAGCAGTCGCGCTCTTTGACTTTGAACGCGAAAAC
GAAAACGAGCTTCCCCTGGTTGAGGGCCAAATCATATGGGTGTCGTATCGCCATGGCCAAGGCTGGCTGGTGGCT
GAGGATCCCAAGACACAGGAGAATGGTCTGGTGCCCGAGGAATATGTCAGGTTGCTGCGTGACATTGAGGGAGGC
ATGAACAGCCTCACAGGCCAGTTGGGCGATGGCTCTGGCTCGCCCCACGAGGCCGGCACGCCCACCCAAACAGAA
CATGGCGTCCCAGAGGGCCACCATCGAAATATCAGCAACACGACCAATGGCTACCACCAGCCTGTCGTGTCAATT
TTTTCAACATCAAGCAAGGACTTGAATCCATATCCGACAGAGCAGCTGGGCATTCAAGCTGGACAGACACCACCC
CAAGTCGTTCATTACCATGGGCAAAGGGGAGGCAGCCAAGCAAATACTCCCACGCTTTCTCAGCACAGCGATTTG
GGCGCGTTGAGAAGAGGAAGCCAGGACTCTTGCAATCGAGATGAGGCAGAGAATTCCTCAGCTACAGAAGAATCA
GGAACAAAGGCGGCATCATCTGCCGCACAGACGGCCGAAGCAAAGACCGAGGCTAATCGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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