Protein ID | OphauB2|4451 |
Gene name | |
Location | Contig_3:186908..188471 |
Strand | - |
Gene length (bp) | 1563 |
Transcript length (bp) | 1563 |
Coding sequence length (bp) | 1563 |
Protein length (aa) | 521 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00018 | SH3_1 | SH3 domain | 1.1E-08 | 316 | 362 |
PF07653 | SH3_2 | Variant SH3 domain | 2.6E-05 | 315 | 367 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q12163|NBP2_YEAST | NAP1-binding protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NBP2 PE=1 SV=1 | 260 | 370 | 7.0E-17 |
sp|Q9US59|SKB5_SCHPO | Shk1 kinase-binding protein 5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=skb5 PE=1 SV=1 | 252 | 368 | 2.0E-07 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005515 | protein binding | Yes |
GO:0003674 | molecular_function | No |
GO:0005488 | binding | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 34 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauB2|4451 MPESTSPASTPTTDSFSLPQHLSSSALPPTADMTPTMTATTTQWRSSNLARSMSHASKERLSHYSTGSAPSKSPP SSQHLHLLTSTLSYTCVRDFAYPLSHPMHHGPPPPHPSSPPSGMTTPVSESQRLSDPPASFEQRMPWDSWTADGF SRSCDAPPFQFGDGPPYSEDEDLQSPVVATRHRKHKSNSASLNTDRPRSGRGADAQPSHVLDSSNYDSERGYLVH RSGDGSERYYVNQGGEANGPGGELVTYPPDHARHSRAFHFAQQLGGNEGYASDDYSSPSSPGCHDADQSRYSRDY QFTITSPDEEFHGKAVALFDFERENENELPLVEGQIIWVSYRHGQGWLVAEDPKTQENGLVPEEYVRLLRDIEGG MNSLTGQLGDGSGSPHEAGTPTQTEHGVPEGHHRNISNTTNGYHQPVVSIFSTSSKDLNPYPTEQLGIQAGQTPP QVVHYHGQRGGSQANTPTLSQHSDLGALRRGSQDSCNRDEAENSSATEESGTKAASSAAQTAEAKTEANR* |
Coding | >OphauB2|4451 ATGCCCGAGTCCACGTCGCCCGCCTCCACGCCCACCACGGATTCCTTTTCCTTGCCTCAACATCTTAGCTCTTCA GCCCTGCCGCCGACTGCCGACATGACGCCGACAATGACGGCCACCACGACGCAATGGCGCTCCAGCAATCTGGCC CGTTCCATGTCGCACGCCTCCAAGGAACGATTGTCGCACTACTCGACGGGCTCGGCGCCTTCAAAATCACCTCCC TCGTCACAGCATCTCCACCTTCTGACCTCGACCCTCTCCTATACTTGCGTGCGCGATTTCGCATACCCCCTATCT CATCCTATGCATCATGGCCCTCCTCCTCCCCATCCTTCTAGTCCACCCTCGGGAATGACGACGCCCGTCAGCGAG TCCCAGAGGCTTTCTGACCCCCCAGCATCCTTCGAGCAGAGGATGCCTTGGGATTCCTGGACCGCCGATGGCTTC AGCCGCTCATGCGACGCTCCTCCCTTCCAGTTTGGCGATGGCCCCCCATATAGCGAGGATGAAGACCTTCAAAGC CCCGTCGTTGCCACTCGTCATCGCAAACACAAGTCTAATTCTGCGAGCCTCAACACTGATCGCCCAAGAAGCGGG CGCGGCGCCGATGCGCAACCCTCACATGTTCTCGATTCGTCAAACTATGACAGCGAGAGGGGTTATCTTGTCCAT CGAAGCGGTGACGGGAGCGAACGATACTATGTCAATCAAGGGGGCGAGGCCAATGGGCCTGGCGGCGAACTTGTC ACATACCCCCCCGATCATGCCAGACACAGCCGCGCATTCCACTTTGCTCAGCAACTAGGCGGCAACGAGGGCTAT GCATCCGATGACTACAGCTCGCCATCTTCCCCCGGCTGCCACGACGCCGACCAATCTCGCTACTCTCGAGATTAT CAGTTCACAATAACATCTCCCGACGAAGAGTTTCATGGCAAAGCAGTCGCGCTCTTTGACTTTGAACGCGAAAAC GAAAACGAGCTTCCCCTGGTTGAGGGCCAAATCATATGGGTGTCGTATCGCCATGGCCAAGGCTGGCTGGTGGCT GAGGATCCCAAGACACAGGAGAATGGTCTGGTGCCCGAGGAATATGTCAGGTTGCTGCGTGACATTGAGGGAGGC ATGAACAGCCTCACAGGCCAGTTGGGCGATGGCTCTGGCTCGCCCCACGAGGCCGGCACGCCCACCCAAACAGAA CATGGCGTCCCAGAGGGCCACCATCGAAATATCAGCAACACGACCAATGGCTACCACCAGCCTGTCGTGTCAATT TTTTCAACATCAAGCAAGGACTTGAATCCATATCCGACAGAGCAGCTGGGCATTCAAGCTGGACAGACACCACCC CAAGTCGTTCATTACCATGGGCAAAGGGGAGGCAGCCAAGCAAATACTCCCACGCTTTCTCAGCACAGCGATTTG GGCGCGTTGAGAAGAGGAAGCCAGGACTCTTGCAATCGAGATGAGGCAGAGAATTCCTCAGCTACAGAAGAATCA GGAACAAAGGCGGCATCATCTGCCGCACAGACGGCCGAAGCAAAGACCGAGGCTAATCGGTGA |
Transcript | >OphauB2|4451 ATGCCCGAGTCCACGTCGCCCGCCTCCACGCCCACCACGGATTCCTTTTCCTTGCCTCAACATCTTAGCTCTTCA GCCCTGCCGCCGACTGCCGACATGACGCCGACAATGACGGCCACCACGACGCAATGGCGCTCCAGCAATCTGGCC CGTTCCATGTCGCACGCCTCCAAGGAACGATTGTCGCACTACTCGACGGGCTCGGCGCCTTCAAAATCACCTCCC TCGTCACAGCATCTCCACCTTCTGACCTCGACCCTCTCCTATACTTGCGTGCGCGATTTCGCATACCCCCTATCT CATCCTATGCATCATGGCCCTCCTCCTCCCCATCCTTCTAGTCCACCCTCGGGAATGACGACGCCCGTCAGCGAG TCCCAGAGGCTTTCTGACCCCCCAGCATCCTTCGAGCAGAGGATGCCTTGGGATTCCTGGACCGCCGATGGCTTC AGCCGCTCATGCGACGCTCCTCCCTTCCAGTTTGGCGATGGCCCCCCATATAGCGAGGATGAAGACCTTCAAAGC CCCGTCGTTGCCACTCGTCATCGCAAACACAAGTCTAATTCTGCGAGCCTCAACACTGATCGCCCAAGAAGCGGG CGCGGCGCCGATGCGCAACCCTCACATGTTCTCGATTCGTCAAACTATGACAGCGAGAGGGGTTATCTTGTCCAT CGAAGCGGTGACGGGAGCGAACGATACTATGTCAATCAAGGGGGCGAGGCCAATGGGCCTGGCGGCGAACTTGTC ACATACCCCCCCGATCATGCCAGACACAGCCGCGCATTCCACTTTGCTCAGCAACTAGGCGGCAACGAGGGCTAT GCATCCGATGACTACAGCTCGCCATCTTCCCCCGGCTGCCACGACGCCGACCAATCTCGCTACTCTCGAGATTAT CAGTTCACAATAACATCTCCCGACGAAGAGTTTCATGGCAAAGCAGTCGCGCTCTTTGACTTTGAACGCGAAAAC GAAAACGAGCTTCCCCTGGTTGAGGGCCAAATCATATGGGTGTCGTATCGCCATGGCCAAGGCTGGCTGGTGGCT GAGGATCCCAAGACACAGGAGAATGGTCTGGTGCCCGAGGAATATGTCAGGTTGCTGCGTGACATTGAGGGAGGC ATGAACAGCCTCACAGGCCAGTTGGGCGATGGCTCTGGCTCGCCCCACGAGGCCGGCACGCCCACCCAAACAGAA CATGGCGTCCCAGAGGGCCACCATCGAAATATCAGCAACACGACCAATGGCTACCACCAGCCTGTCGTGTCAATT TTTTCAACATCAAGCAAGGACTTGAATCCATATCCGACAGAGCAGCTGGGCATTCAAGCTGGACAGACACCACCC CAAGTCGTTCATTACCATGGGCAAAGGGGAGGCAGCCAAGCAAATACTCCCACGCTTTCTCAGCACAGCGATTTG GGCGCGTTGAGAAGAGGAAGCCAGGACTCTTGCAATCGAGATGAGGCAGAGAATTCCTCAGCTACAGAAGAATCA GGAACAAAGGCGGCATCATCTGCCGCACAGACGGCCGAAGCAAAGACCGAGGCTAATCGGTGA |
Gene | >OphauB2|4451 ATGCCCGAGTCCACGTCGCCCGCCTCCACGCCCACCACGGATTCCTTTTCCTTGCCTCAACATCTTAGCTCTTCA GCCCTGCCGCCGACTGCCGACATGACGCCGACAATGACGGCCACCACGACGCAATGGCGCTCCAGCAATCTGGCC CGTTCCATGTCGCACGCCTCCAAGGAACGATTGTCGCACTACTCGACGGGCTCGGCGCCTTCAAAATCACCTCCC TCGTCACAGCATCTCCACCTTCTGACCTCGACCCTCTCCTATACTTGCGTGCGCGATTTCGCATACCCCCTATCT CATCCTATGCATCATGGCCCTCCTCCTCCCCATCCTTCTAGTCCACCCTCGGGAATGACGACGCCCGTCAGCGAG TCCCAGAGGCTTTCTGACCCCCCAGCATCCTTCGAGCAGAGGATGCCTTGGGATTCCTGGACCGCCGATGGCTTC AGCCGCTCATGCGACGCTCCTCCCTTCCAGTTTGGCGATGGCCCCCCATATAGCGAGGATGAAGACCTTCAAAGC CCCGTCGTTGCCACTCGTCATCGCAAACACAAGTCTAATTCTGCGAGCCTCAACACTGATCGCCCAAGAAGCGGG CGCGGCGCCGATGCGCAACCCTCACATGTTCTCGATTCGTCAAACTATGACAGCGAGAGGGGTTATCTTGTCCAT CGAAGCGGTGACGGGAGCGAACGATACTATGTCAATCAAGGGGGCGAGGCCAATGGGCCTGGCGGCGAACTTGTC ACATACCCCCCCGATCATGCCAGACACAGCCGCGCATTCCACTTTGCTCAGCAACTAGGCGGCAACGAGGGCTAT GCATCCGATGACTACAGCTCGCCATCTTCCCCCGGCTGCCACGACGCCGACCAATCTCGCTACTCTCGAGATTAT CAGTTCACAATAACATCTCCCGACGAAGAGTTTCATGGCAAAGCAGTCGCGCTCTTTGACTTTGAACGCGAAAAC GAAAACGAGCTTCCCCTGGTTGAGGGCCAAATCATATGGGTGTCGTATCGCCATGGCCAAGGCTGGCTGGTGGCT GAGGATCCCAAGACACAGGAGAATGGTCTGGTGCCCGAGGAATATGTCAGGTTGCTGCGTGACATTGAGGGAGGC ATGAACAGCCTCACAGGCCAGTTGGGCGATGGCTCTGGCTCGCCCCACGAGGCCGGCACGCCCACCCAAACAGAA CATGGCGTCCCAGAGGGCCACCATCGAAATATCAGCAACACGACCAATGGCTACCACCAGCCTGTCGTGTCAATT TTTTCAACATCAAGCAAGGACTTGAATCCATATCCGACAGAGCAGCTGGGCATTCAAGCTGGACAGACACCACCC CAAGTCGTTCATTACCATGGGCAAAGGGGAGGCAGCCAAGCAAATACTCCCACGCTTTCTCAGCACAGCGATTTG GGCGCGTTGAGAAGAGGAAGCCAGGACTCTTGCAATCGAGATGAGGCAGAGAATTCCTCAGCTACAGAAGAATCA GGAACAAAGGCGGCATCATCTGCCGCACAGACGGCCGAAGCAAAGACCGAGGCTAATCGGTGA |