Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|4435
Gene name
LocationContig_3:148349..150708
Strand-
Gene length (bp)2359
Transcript length (bp)2301
Coding sequence length (bp)2301
Protein length (aa) 767

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05277 DUF726 Protein of unknown function (DUF726) 3.3E-113 256 601

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9US10|YK68_SCHPO Uncharacterized membrane protein C6F6.13c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC607.08c PE=3 SV=1 182 600 1.0E-74
sp|Q499U8|TMCO4_RAT Transmembrane and coiled-coil domain-containing protein 4 OS=Rattus norvegicus GN=Tmco4 PE=2 SV=1 142 599 1.0E-59
sp|Q91WU4|TMCO4_MOUSE Transmembrane and coiled-coil domain-containing protein 4 OS=Mus musculus GN=Tmco4 PE=2 SV=2 142 599 1.0E-55
sp|Q5TGY1|TMCO4_HUMAN Transmembrane and coiled-coil domain-containing protein 4 OS=Homo sapiens GN=TMCO4 PE=2 SV=1 190 599 2.0E-54
sp|O14244|YELD_SCHPO Uncharacterized membrane protein C6F6.13c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC6F6.13c PE=3 SV=1 80 590 3.0E-54
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[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q9US10|YK68_SCHPO Uncharacterized membrane protein C6F6.13c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC607.08c PE=3 SV=1 182 600 1.0E-74
sp|Q499U8|TMCO4_RAT Transmembrane and coiled-coil domain-containing protein 4 OS=Rattus norvegicus GN=Tmco4 PE=2 SV=1 142 599 1.0E-59
sp|Q91WU4|TMCO4_MOUSE Transmembrane and coiled-coil domain-containing protein 4 OS=Mus musculus GN=Tmco4 PE=2 SV=2 142 599 1.0E-55
sp|Q5TGY1|TMCO4_HUMAN Transmembrane and coiled-coil domain-containing protein 4 OS=Homo sapiens GN=TMCO4 PE=2 SV=1 190 599 2.0E-54
sp|O14244|YELD_SCHPO Uncharacterized membrane protein C6F6.13c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC6F6.13c PE=3 SV=1 80 590 3.0E-54
sp|Q20035|TMCO4_CAEEL Uncharacterized membrane protein F35D11.3 OS=Caenorhabditis elegans GN=F35D11.3 PE=3 SV=2 140 620 4.0E-53
sp|P43564|YFD4_YEAST Uncharacterized membrane protein YFL034W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YFL034W PE=1 SV=2 185 631 1.0E-43
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 47 0.45

Transmembrane Domains

Domain # Start End Length
1 263 285 22
2 300 322 22
3 429 451 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|4435
MAPLCADPRQVVIALDVASRQRLLKLIDHVISVMMMQLETPSDELGAVSTDGETNSPAPESEEQHASQHKLGKQP
TAKTCHQSLGIQQAALEHLEAWRDEFLPRLKEIVKVQDDAKIVAERTKRRSAMEKKRLDTAEDGEDLMSFGDVQM
DKSDDLTSLQTLYPPVPTELSTLQSQDRKEALSCVLLLLLATGKYSAYSRTLLLYLASSLELPQTFVNNEEAEIA
SSLLESSTADKSSKETMSAEAEAAKRRNDNKFSRYWKVGLASVAGAAVIGVTGGLAAPLVAGAIGGIMGGVGLGG
VASFLGIFWMNSALVGALFGAYGAKMTGEMMDSYAKEVEDFKFIPLDDQAADSKEKATQQQRRLRVTIGINGWLS
SESDVTKPWRVLGPDTEVFALRYEMKSLLALGSALQDLVHSFAWRALKVEVIKRTVLATLWAALWPIQVLAAATS
VDNPFGRARNRSRKAGRLLADALINRVQGERPVTLVGYSLGATAIHACLQSLAERRAFGLVASVVLIGAPAPSSP
AHWRSLRCVVSGTIFNVFSENDMVLGLVYRVHSLQLGVAGLQAIEQVGGIVNVNLSDRVSGHLRYASLTGEILRQ
CAFVGVSAGADIEQDDVIRMKHNHAQGKLVNIDDDDDDDAAACSPSPNTKGKEDSEDKLAHSLDRLNISPAGSSP
SPSAANVGSAPPSTIPRKPVPSQQPLVHQAKAAQLASQPAPSHAESSATQRPFGAKKPTRRPLTPETSDTDSSDD
VEYKPIVMEDRGGDDD*
Coding >OphauB2|4435
ATGGCGCCCCTCTGTGCCGACCCGCGACAGGTTGTCATTGCCTTGGACGTCGCCAGTCGTCAGCGGCTGCTCAAG
CTCATTGACCATGTCATTTCAGTCATGATGATGCAGCTTGAGACTCCCTCTGACGAGCTGGGCGCTGTATCGACC
GACGGCGAGACCAACAGTCCAGCACCCGAGTCAGAAGAGCAGCATGCCTCACAGCATAAACTTGGCAAGCAGCCG
ACGGCCAAGACGTGCCACCAGTCACTAGGCATTCAGCAGGCAGCATTGGAGCACTTGGAGGCATGGCGAGACGAG
TTTCTGCCCCGGCTCAAGGAGATTGTCAAGGTTCAAGACGACGCCAAGATTGTGGCTGAGCGCACAAAGAGACGC
AGCGCCATGGAGAAGAAGAGGCTTGACACAGCCGAAGACGGCGAAGATCTCATGAGCTTTGGTGACGTGCAGATG
GACAAGTCGGACGACTTGACCTCTCTGCAGACCCTCTACCCTCCTGTGCCAACCGAGCTGTCGACTCTTCAGTCA
CAAGACCGCAAGGAGGCTCTGAGCTGCGTCTTGCTTCTCCTGCTAGCCACGGGGAAATACTCGGCTTATTCCCGC
ACCCTGCTCCTCTACCTGGCTTCCAGCCTCGAGCTGCCACAGACGTTTGTCAACAATGAGGAGGCAGAGATTGCC
AGCTCCCTGTTGGAGTCGTCAACTGCAGACAAGTCAAGCAAGGAGACCATGTCTGCCGAGGCCGAGGCGGCCAAG
CGCCGCAACGACAACAAGTTTAGCCGCTACTGGAAGGTTGGGCTTGCCTCCGTGGCTGGTGCGGCAGTCATTGGC
GTGACTGGCGGTCTTGCTGCTCCTCTGGTGGCTGGGGCTATTGGCGGCATCATGGGCGGCGTTGGCCTGGGCGGG
GTGGCCAGCTTCCTTGGCATATTCTGGATGAATAGCGCCCTTGTGGGAGCTCTATTTGGCGCATACGGCGCAAAG
ATGACGGGCGAGATGATGGACAGCTACGCAAAGGAAGTTGAAGACTTCAAGTTTATCCCCCTCGATGACCAAGCC
GCCGACAGCAAGGAAAAGGCGACTCAGCAACAGCGCCGCCTCCGCGTCACCATTGGCATCAATGGCTGGCTCAGC
TCCGAGTCTGACGTGACCAAGCCCTGGCGCGTCCTCGGCCCCGACACCGAAGTCTTTGCCCTGCGCTACGAGATG
AAGTCGCTGCTGGCACTGGGAAGCGCTCTGCAGGACCTGGTGCACTCGTTTGCCTGGCGCGCCCTCAAGGTCGAG
GTGATTAAGCGCACCGTCCTCGCCACTCTTTGGGCCGCTCTCTGGCCCATCCAGGTCCTGGCGGCCGCCACCAGC
GTCGACAATCCCTTTGGTCGCGCGCGCAATCGCTCTCGCAAGGCCGGCCGCCTCCTCGCCGACGCCCTCATCAAT
CGCGTCCAGGGCGAGAGACCCGTCACCCTTGTCGGCTACTCTCTCGGCGCTACTGCCATTCACGCCTGTCTGCAG
TCGCTCGCCGAGCGCCGCGCCTTTGGTCTCGTCGCCTCCGTCGTGCTTATTGGAGCGCCCGCTCCGTCATCCCCC
GCCCACTGGCGCTCTCTGCGCTGCGTTGTCTCGGGAACCATTTTCAACGTCTTTTCGGAAAACGACATGGTTCTT
GGCCTCGTCTACCGCGTTCACAGCCTCCAACTCGGTGTTGCCGGCCTCCAGGCCATTGAGCAGGTTGGCGGCATC
GTCAATGTCAATCTCAGCGACCGTGTCAGCGGCCACTTGCGATATGCTAGTCTGACGGGCGAGATTCTTCGCCAA
TGTGCCTTTGTTGGCGTCTCTGCCGGAGCCGACATTGAGCAGGACGACGTTATACGCATGAAGCACAATCATGCC
CAAGGCAAGCTTGTCAACATTGACGACGACGACGACGACGACGCTGCTGCATGCTCGCCAAGTCCAAACACCAAG
GGAAAAGAGGACAGCGAGGACAAGCTTGCGCACAGCTTGGACCGTCTCAACATCTCGCCAGCAGGCTCCTCTCCA
TCCCCGTCCGCCGCCAATGTCGGCTCTGCACCTCCGTCTACGATTCCCAGGAAGCCAGTCCCTTCACAGCAACCT
CTTGTACACCAAGCCAAGGCAGCCCAGCTGGCCTCTCAACCCGCTCCTTCTCACGCCGAATCCTCTGCTACTCAA
CGTCCTTTCGGGGCAAAGAAGCCGACTCGACGGCCCCTCACGCCAGAAACCAGCGATACTGACAGTTCTGACGAT
GTCGAGTACAAGCCCATTGTAATGGAGGACAGGGGAGGTGATGACGATTAG
Transcript >OphauB2|4435
ATGGCGCCCCTCTGTGCCGACCCGCGACAGGTTGTCATTGCCTTGGACGTCGCCAGTCGTCAGCGGCTGCTCAAG
CTCATTGACCATGTCATTTCAGTCATGATGATGCAGCTTGAGACTCCCTCTGACGAGCTGGGCGCTGTATCGACC
GACGGCGAGACCAACAGTCCAGCACCCGAGTCAGAAGAGCAGCATGCCTCACAGCATAAACTTGGCAAGCAGCCG
ACGGCCAAGACGTGCCACCAGTCACTAGGCATTCAGCAGGCAGCATTGGAGCACTTGGAGGCATGGCGAGACGAG
TTTCTGCCCCGGCTCAAGGAGATTGTCAAGGTTCAAGACGACGCCAAGATTGTGGCTGAGCGCACAAAGAGACGC
AGCGCCATGGAGAAGAAGAGGCTTGACACAGCCGAAGACGGCGAAGATCTCATGAGCTTTGGTGACGTGCAGATG
GACAAGTCGGACGACTTGACCTCTCTGCAGACCCTCTACCCTCCTGTGCCAACCGAGCTGTCGACTCTTCAGTCA
CAAGACCGCAAGGAGGCTCTGAGCTGCGTCTTGCTTCTCCTGCTAGCCACGGGGAAATACTCGGCTTATTCCCGC
ACCCTGCTCCTCTACCTGGCTTCCAGCCTCGAGCTGCCACAGACGTTTGTCAACAATGAGGAGGCAGAGATTGCC
AGCTCCCTGTTGGAGTCGTCAACTGCAGACAAGTCAAGCAAGGAGACCATGTCTGCCGAGGCCGAGGCGGCCAAG
CGCCGCAACGACAACAAGTTTAGCCGCTACTGGAAGGTTGGGCTTGCCTCCGTGGCTGGTGCGGCAGTCATTGGC
GTGACTGGCGGTCTTGCTGCTCCTCTGGTGGCTGGGGCTATTGGCGGCATCATGGGCGGCGTTGGCCTGGGCGGG
GTGGCCAGCTTCCTTGGCATATTCTGGATGAATAGCGCCCTTGTGGGAGCTCTATTTGGCGCATACGGCGCAAAG
ATGACGGGCGAGATGATGGACAGCTACGCAAAGGAAGTTGAAGACTTCAAGTTTATCCCCCTCGATGACCAAGCC
GCCGACAGCAAGGAAAAGGCGACTCAGCAACAGCGCCGCCTCCGCGTCACCATTGGCATCAATGGCTGGCTCAGC
TCCGAGTCTGACGTGACCAAGCCCTGGCGCGTCCTCGGCCCCGACACCGAAGTCTTTGCCCTGCGCTACGAGATG
AAGTCGCTGCTGGCACTGGGAAGCGCTCTGCAGGACCTGGTGCACTCGTTTGCCTGGCGCGCCCTCAAGGTCGAG
GTGATTAAGCGCACCGTCCTCGCCACTCTTTGGGCCGCTCTCTGGCCCATCCAGGTCCTGGCGGCCGCCACCAGC
GTCGACAATCCCTTTGGTCGCGCGCGCAATCGCTCTCGCAAGGCCGGCCGCCTCCTCGCCGACGCCCTCATCAAT
CGCGTCCAGGGCGAGAGACCCGTCACCCTTGTCGGCTACTCTCTCGGCGCTACTGCCATTCACGCCTGTCTGCAG
TCGCTCGCCGAGCGCCGCGCCTTTGGTCTCGTCGCCTCCGTCGTGCTTATTGGAGCGCCCGCTCCGTCATCCCCC
GCCCACTGGCGCTCTCTGCGCTGCGTTGTCTCGGGAACCATTTTCAACGTCTTTTCGGAAAACGACATGGTTCTT
GGCCTCGTCTACCGCGTTCACAGCCTCCAACTCGGTGTTGCCGGCCTCCAGGCCATTGAGCAGGTTGGCGGCATC
GTCAATGTCAATCTCAGCGACCGTGTCAGCGGCCACTTGCGATATGCTAGTCTGACGGGCGAGATTCTTCGCCAA
TGTGCCTTTGTTGGCGTCTCTGCCGGAGCCGACATTGAGCAGGACGACGTTATACGCATGAAGCACAATCATGCC
CAAGGCAAGCTTGTCAACATTGACGACGACGACGACGACGACGCTGCTGCATGCTCGCCAAGTCCAAACACCAAG
GGAAAAGAGGACAGCGAGGACAAGCTTGCGCACAGCTTGGACCGTCTCAACATCTCGCCAGCAGGCTCCTCTCCA
TCCCCGTCCGCCGCCAATGTCGGCTCTGCACCTCCGTCTACGATTCCCAGGAAGCCAGTCCCTTCACAGCAACCT
CTTGTACACCAAGCCAAGGCAGCCCAGCTGGCCTCTCAACCCGCTCCTTCTCACGCCGAATCCTCTGCTACTCAA
CGTCCTTTCGGGGCAAAGAAGCCGACTCGACGGCCCCTCACGCCAGAAACCAGCGATACTGACAGTTCTGACGAT
GTCGAGTACAAGCCCATTGTAATGGAGGACAGGGGAGGTGATGACGATTAG
Gene >OphauB2|4435
ATGGCGCCCCTCTGTGCCGACCCGCGACAGGTTGTCATTGCCTTGGACGTCGCCAGTCGTCAGCGGCTGCTCAAG
CTCATTGACCATGTCATTTCAGTCATGATGATGCAGCTTGAGACTCCCTCTGACGAGCTGGGCGCTGTATCGACC
GACGGCGAGACCAACAGTCCAGCACCCGAGTCAGAAGAGCAGCATGCCTCACAGCATAAACTTGGCAAGCAGCCG
ACGGCCAAGACGTGCCACCAGTCACTAGGCATTCAGCAGGCAGCATTGGAGCACTTGGAGGCATGGCGAGACGAG
TTTCTGCCCCGGCTCAAGGAGATTGTCAAGGTTCAAGACGACGCCAAGATTGTGGCTGAGCGCACAAAGAGACGC
AGCGCCATGGAGAAGAAGAGGCTTGACACAGCCGAAGACGGCGAAGATCTCATGAGCTTTGGTGACGTGCAGATG
GACAAGTCGGACGACTTGACCTCTCTGCAGACCCTCTACCCTCCTGTGCCAACCGAGCTGTCGACTCTTCAGTCA
CAAGACCGCAAGGAGGCTCTGAGCTGCGTCTTGCTTCTCCTGCTAGCCACGGGGAAATACTCGGCTTATTCCCGC
ACCCTGCTCCTCTACCTGGCTTCCAGCCTCGAGCTGCCACAGACGTTTGTCAACAATGAGGAGGCAGAGATTGCC
AGCTCCCTGTTGGAGTCGTCAACTGCAGACAAGTCAAGCAAGGAGACCATGTCTGCCGAGGCCGAGGCGGCCAAG
CGCCGCAACGACAACAAGTTTAGCCGCTACTGGAAGGTTGGGCTTGCCTCCGTGGCTGGTGCGGCAGTCATTGGC
GTGACTGGCGGTCTTGCTGCTCCTCTGGTGGCTGGGGCTATTGGCGGCATCATGGGCGGCGTTGGCCTGGGCGGG
GTGGCCAGCTTCCTTGGCATATTCTGGATGAATAGCGCCCTTGTGGGAGCTCTATTTGGCGCATACGGCGCAAAG
ATGACGGCAAGTCTTCTGGGCCATGTGCATGCAACGCAAGCCCTTCAACTGACTTGGGGTCCAGGGCGAGATGAT
GGACAGCTACGCAAAGGAAGTTGAAGACTTCAAGTTTATCCCCCTCGATGACCAAGCCGCCGACAGCAAGGAAAA
GGCGACTCAGCAACAGCGCCGCCTCCGCGTCACCATTGGCATCAATGGCTGGCTCAGCTCCGAGTCTGACGTGAC
CAAGCCCTGGCGCGTCCTCGGCCCCGACACCGAAGTCTTTGCCCTGCGCTACGAGATGAAGTCGCTGCTGGCACT
GGGAAGCGCTCTGCAGGACCTGGTGCACTCGTTTGCCTGGCGCGCCCTCAAGGTCGAGGTGATTAAGCGCACCGT
CCTCGCCACTCTTTGGGCCGCTCTCTGGCCCATCCAGGTCCTGGCGGCCGCCACCAGCGTCGACAATCCCTTTGG
TCGCGCGCGCAATCGCTCTCGCAAGGCCGGCCGCCTCCTCGCCGACGCCCTCATCAATCGCGTCCAGGGCGAGAG
ACCCGTCACCCTTGTCGGCTACTCTCTCGGCGCTACTGCCATTCACGCCTGTCTGCAGTCGCTCGCCGAGCGCCG
CGCCTTTGGTCTCGTCGCCTCCGTCGTGCTTATTGGAGCGCCCGCTCCGTCATCCCCCGCCCACTGGCGCTCTCT
GCGCTGCGTTGTCTCGGGAACCATTTTCAACGTCTTTTCGGAAAACGACATGGTTCTTGGCCTCGTCTACCGCGT
TCACAGCCTCCAACTCGGTGTTGCCGGCCTCCAGGCCATTGAGCAGGTTGGCGGCATCGTCAATGTCAATCTCAG
CGACCGTGTCAGCGGCCACTTGCGATATGCTAGTCTGACGGGCGAGATTCTTCGCCAATGTGCCTTTGTTGGCGT
CTCTGCCGGAGCCGACATTGAGCAGGACGACGTTATACGCATGAAGCACAATCATGCCCAAGGCAAGCTTGTCAA
CATTGACGACGACGACGACGACGACGCTGCTGCATGCTCGCCAAGTCCAAACACCAAGGGAAAAGAGGACAGCGA
GGACAAGCTTGCGCACAGCTTGGACCGTCTCAACATCTCGCCAGCAGGCTCCTCTCCATCCCCGTCCGCCGCCAA
TGTCGGCTCTGCACCTCCGTCTACGATTCCCAGGAAGCCAGTCCCTTCACAGCAACCTCTTGTACACCAAGCCAA
GGCAGCCCAGCTGGCCTCTCAACCCGCTCCTTCTCACGCCGAATCCTCTGCTACTCAACGTCCTTTCGGGGCAAA
GAAGCCGACTCGACGGCCCCTCACGCCAGAAACCAGCGATACTGACAGTTCTGACGATGTCGAGTACAAGCCCAT
TGTAATGGAGGACAGGGGAGGTGATGACGATTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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