Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|4418
Gene name
LocationContig_3:109765..110635
Strand-
Gene length (bp)870
Transcript length (bp)633
Coding sequence length (bp)633
Protein length (aa) 211

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05529 Bap31 Bap31/Bap29 transmembrane region 2.3E-50 1 139
PF18035 Bap31_Bap29_C Bap31/Bap29 cytoplasmic coiled-coil domain 1.8E-11 161 208

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O14290|YF14_SCHPO Uncharacterized protein C9E9.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC9E9.04 PE=4 SV=1 1 209 2.0E-36
sp|Q07451|YET3_YEAST Endoplasmic reticulum transmembrane protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YET3 PE=1 SV=1 1 157 1.0E-32
sp|P35723|YET1_YEAST Endoplasmic reticulum transmembrane protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YET1 PE=1 SV=2 14 192 1.0E-14
sp|Q04210|YET2_YEAST Endoplasmic reticulum transmembrane protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YET2 PE=1 SV=1 1 182 2.0E-14
sp|Q61334|BAP29_MOUSE B-cell receptor-associated protein 29 OS=Mus musculus GN=Bcap29 PE=1 SV=1 1 210 3.0E-14
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Swissprot ID Swissprot Description Start End E-value
sp|O14290|YF14_SCHPO Uncharacterized protein C9E9.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC9E9.04 PE=4 SV=1 1 209 2.0E-36
sp|Q07451|YET3_YEAST Endoplasmic reticulum transmembrane protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YET3 PE=1 SV=1 1 157 1.0E-32
sp|P35723|YET1_YEAST Endoplasmic reticulum transmembrane protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YET1 PE=1 SV=2 14 192 1.0E-14
sp|Q04210|YET2_YEAST Endoplasmic reticulum transmembrane protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YET2 PE=1 SV=1 1 182 2.0E-14
sp|Q61334|BAP29_MOUSE B-cell receptor-associated protein 29 OS=Mus musculus GN=Bcap29 PE=1 SV=1 1 210 3.0E-14
sp|Q54K74|YETL_DICDI Endoplasmic reticulum transmembrane protein YET-like OS=Dictyostelium discoideum GN=DDB_G0287543 PE=3 SV=2 1 201 2.0E-10
sp|Q9UHQ4|BAP29_HUMAN B-cell receptor-associated protein 29 OS=Homo sapiens GN=BCAP29 PE=1 SV=2 1 202 8.0E-09
sp|Q5R9U7|BAP29_PONAB B-cell receptor-associated protein 29 OS=Pongo abelii GN=BCAP29 PE=2 SV=1 1 202 9.0E-09
sp|Q32KL9|BAP29_BOVIN B-cell receptor-associated protein 29 OS=Bos taurus GN=BCAP29 PE=2 SV=1 1 208 8.0E-08
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 31 0.5

Transmembrane Domains

Domain # Start End Length
1 7 29 22
2 44 63 19
3 106 128 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|4418
MTLYYSLVFSLLVLEMGLFMLLVLPMPFNAKRKLFTFISENPLVAKVQYWMKITFVFILILFLDSVNRVYRVQLE
LSSASDASKGPAIIGSERLEVQARKFYSQRNMYLCGFTLFLSLILNRTYVMILEMMRLEDRLRAFEGTRKDTKES
EKLAMAGKPGELAKLREKLAQKERDLETLKKQSTQLHKSYDELTDKYAATQNSGEARKEK*
Coding >OphauB2|4418
ATGACGCTCTACTATAGCCTGGTTTTCTCGCTTCTCGTCTTGGAGATGGGTCTCTTTATGCTCTTGGTTTTGCCG
ATGCCCTTTAACGCTAAGCGCAAACTCTTCACCTTCATCTCGGAAAACCCCCTCGTGGCCAAGGTTCAGTATTGG
ATGAAGATTACCTTTGTCTTTATCCTCATTCTCTTCCTCGACAGCGTCAATCGGGTCTATCGTGTCCAGCTCGAG
CTCTCGTCTGCTTCTGATGCGAGCAAGGGCCCGGCAATTATTGGTTCGGAGCGACTCGAGGTGCAGGCTCGCAAG
TTTTACTCGCAGCGCAACATGTATCTTTGCGGCTTCACGCTCTTCCTGTCCCTCATTCTCAACCGCACCTATGTC
ATGATTCTCGAAATGATGCGACTTGAGGACCGCCTCCGGGCTTTCGAGGGCACACGCAAGGACACCAAGGAGAGC
GAGAAGCTGGCCATGGCTGGTAAGCCCGGCGAATTGGCCAAGCTGCGCGAGAAGCTGGCGCAAAAGGAACGCGAT
CTCGAGACGCTCAAGAAGCAGAGCACACAGCTTCACAAGAGCTACGACGAGTTGACGGACAAGTACGCTGCTACA
CAAAATTCTGGCGAGGCGCGCAAGGAAAAGTAG
Transcript >OphauB2|4418
ATGACGCTCTACTATAGCCTGGTTTTCTCGCTTCTCGTCTTGGAGATGGGTCTCTTTATGCTCTTGGTTTTGCCG
ATGCCCTTTAACGCTAAGCGCAAACTCTTCACCTTCATCTCGGAAAACCCCCTCGTGGCCAAGGTTCAGTATTGG
ATGAAGATTACCTTTGTCTTTATCCTCATTCTCTTCCTCGACAGCGTCAATCGGGTCTATCGTGTCCAGCTCGAG
CTCTCGTCTGCTTCTGATGCGAGCAAGGGCCCGGCAATTATTGGTTCGGAGCGACTCGAGGTGCAGGCTCGCAAG
TTTTACTCGCAGCGCAACATGTATCTTTGCGGCTTCACGCTCTTCCTGTCCCTCATTCTCAACCGCACCTATGTC
ATGATTCTCGAAATGATGCGACTTGAGGACCGCCTCCGGGCTTTCGAGGGCACACGCAAGGACACCAAGGAGAGC
GAGAAGCTGGCCATGGCTGGTAAGCCCGGCGAATTGGCCAAGCTGCGCGAGAAGCTGGCGCAAAAGGAACGCGAT
CTCGAGACGCTCAAGAAGCAGAGCACACAGCTTCACAAGAGCTACGACGAGTTGACGGACAAGTACGCTGCTACA
CAAAATTCTGGCGAGGCGCGCAAGGAAAAGTAG
Gene >OphauB2|4418
ATGACGCTCTACTATAGCCTGGTGTGTTTTTTTTTTATTCTTTTCCAATGCCGCAGCAACTGGCGAGGGTCAAGG
GAAGAAGACAAGGGGGGGATAAGGCTGGCTTTTGCTAACGGGCATAGGTTTTCTCGCTTCTCGTCTTGGAGATGG
GTCTCTTTATGCTCTTGGTTTTGCCGATGCCCTTTAACGCTAAGCGCAAACTCTTCACGTATGCTTGACGGCGGT
GCCTCGCGGCTTGTTTATTCTGTGCGTGCTGACATGTTGGTAGCTTCATCTCGGAAAACCCCCTCGTGGCCAAGG
TTCAGTATTGGATGAAGATTACCTTTGTCTTTATCCTCATTCTCTTCCTCGACAGCGTCAATCGGGTCTATCGTG
TCCAGCTCGAGCTCTCGTCTGCTTCTGATGCGAGCAAGGGGTAAGCTCAATGCCGCTCATTGCAACGCTGTGTCT
ATTCCTTTGAAGCATTCTGACCTTTGTCAAAACATTGCTAGCCCGGCAATTATTGGTTCGGAGCGACTCGAGGTG
CAGGCTCGCAAGTTTTACTCGCAGCGCAACATGTATCTTTGCGGCTTCACGCTCTTCCTGTCCCTCATTCTCAAC
CGCACCTATGTCATGATTCTCGAAATGATGCGACTTGAGGACCGCCTCCGGGCTTTCGAGGGCACACGCAAGGAC
ACCAAGGAGAGCGAGAAGCTGGCCATGGCTGGTAAGCCCGGCGAATTGGCCAAGCTGCGCGAGAAGCTGGCGCAA
AAGGAACGCGATCTCGAGACGCTCAAGAAGCAGAGCACACAGCTTCACAAGAGCTACGACGAGTTGACGGACAAG
TACGCTGCTACACAAAATTCTGGCGAGGCGCGCAAGGAAAAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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