Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|4415
Gene name
LocationContig_3:104027..104524
Strand-
Gene length (bp)497
Transcript length (bp)222
Coding sequence length (bp)222
Protein length (aa) 74

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12907 zf-met2 Zinc-binding 2.8E-15 35 70
PF04419 4F5 4F5 protein related disordered region 1.7E-06 1 32

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O64818|Y2309_ARATH Uncharacterized protein At2g23090 OS=Arabidopsis thaliana GN=At2g23090 PE=1 SV=1 2 69 5.0E-09

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 29 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|4415
MGNGAKAQQKRERAQKDQKAAKSQLKVNQQAMSIQCQICKATFLQTTKAPALLEHASNKHSKALADCFPTANK*
Coding >OphauB2|4415
ATGGGCAACGGAGCCAAGGCGCAGCAGAAGCGCGAACGCGCCCAAAAGGACCAAAAGGCTGCCAAGTCGCAGCTC
AAAGTCAACCAGCAAGCCATGTCGATTCAGTGCCAGATTTGCAAGGCCACCTTTTTGCAAACCACAAAGGCCCCA
GCCCTCCTCGAACACGCCTCGAATAAACACAGCAAAGCCCTGGCCGACTGCTTTCCTACGGCCAATAAATAG
Transcript >OphauB2|4415
ATGGGCAACGGAGCCAAGGCGCAGCAGAAGCGCGAACGCGCCCAAAAGGACCAAAAGGCTGCCAAGTCGCAGCTC
AAAGTCAACCAGCAAGCCATGTCGATTCAGTGCCAGATTTGCAAGGCCACCTTTTTGCAAACCACAAAGGCCCCA
GCCCTCCTCGAACACGCCTCGAATAAACACAGCAAAGCCCTGGCCGACTGCTTTCCTACGGCCAATAAATAG
Gene >OphauB2|4415
ATGGGCAACGTGCGCATTCCCAGCATCATGTATCGAGGCCTTGACTGACTGTGTGGCACTTGCAGGGAGCCAAGG
CGCAGCAGAAGCGCGAACGCGCCCAAAAGGACCAAAAGGCTGCCAAGTCGCAGCTCAAAGTCGTGCGTCTTGTCT
CGTCTTGTCTAGTCTAGTCTTGTCTTGTCTTGTCTTGTCTTGTCCTGTCTCAACATAGCCTATCCGCACCGACGC
CTTCTTCTCCATGTCTCAGGTCGCTAACCATCAAACAGAACCAGCAAGCCATGTCGATTCAGTGCCAGATTTGCA
AGGCCACCTTTTTGCAAACCACAAAGGCCCCAGCGTACGTCTAGCATGTAATGCAAAAAAAAAAAAAACATGTCG
AGCGATACCTGAAAAGCCATGGACTAACCCGTCTTGTCCATCTACCTTGCAGCCTCCTCGAACACGCCTCGAATA
AACACAGCAAAGCCCTGGCCGACTGCTTTCCTACGGCCAATAAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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