© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | OphauB2|4323 |
| Gene name | |
| Location | Contig_29:92622..93278 |
| Strand | - |
| Gene length (bp) | 656 |
| Transcript length (bp) | 588 |
| Coding sequence length (bp) | 588 |
| Protein length (aa) | 196 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q06485|ATG33_YEAST | Autophagy-related protein 33 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ATG33 PE=1 SV=1 | 8 | 186 | 7.0E-07 |
| sp|C8ZDW3|ATG33_YEAS8 | Autophagy-related protein 33 OS=Saccharomyces cerevisiae (strain Lalvin EC1118 / Prise de mousse) GN=ATG33 PE=3 SV=1 | 8 | 186 | 2.0E-06 |
| sp|A7A1N4|ATG33_YEAS7 | Autophagy-related protein 33 OS=Saccharomyces cerevisiae (strain YJM789) GN=ATG33 PE=3 SV=1 | 8 | 186 | 2.0E-06 |
| sp|C7GRY1|ATG33_YEAS2 | Autophagy-related protein 33 OS=Saccharomyces cerevisiae (strain JAY291) GN=ATG33 PE=3 SV=1 | 8 | 186 | 2.0E-06 |
| sp|B3RHM5|ATG33_YEAS1 | Autophagy-related protein 33 OS=Saccharomyces cerevisiae (strain RM11-1a) GN=ATG33 PE=3 SV=1 | 8 | 186 | 2.0E-06 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 32 | 0.615731 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 9 | 31 | 22 |
| 2 | 62 | 79 | 17 |
| 3 | 163 | 185 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 4134 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|4323 MACAGARALSVLKFVGTVSLGLLTGVSYTVSAVSLPSLLSLPSSASASHAITSLTTGLKTPLTVLTALASGPLLV SFILSPRSVRHPYLAYTSLLAGLSMAVPLLLPQPQPRQSAAKKQARRSKMEASYEVLGEPQSESTSEGEADDMNG EEVRTQVEGLSRAFLVRTSLAGLGFAMSVLGIWGDGVPQSLVFVS* |
| Coding | >OphauB2|4323 ATGGCGTGCGCGGGAGCCAGAGCCCTTTCTGTGCTCAAGTTTGTGGGCACTGTGTCCCTCGGTTTGTTGACGGGC GTCTCCTACACCGTTTCGGCTGTGTCGCTGCCTAGTCTTCTCTCCCTGCCGTCATCGGCCTCGGCCTCACATGCC ATTACGTCGCTTACCACGGGCCTCAAGACGCCGCTGACGGTGCTTACGGCTCTCGCATCCGGCCCGCTCCTTGTT TCCTTTATTTTGTCTCCGCGATCGGTTCGACACCCGTATCTGGCCTATACGTCGCTGCTTGCTGGGCTTTCAATG GCTGTGCCGCTTCTCTTGCCTCAGCCGCAGCCGCGCCAGTCGGCTGCCAAGAAGCAGGCTCGTCGGTCCAAGATG GAAGCAAGCTACGAGGTGCTGGGTGAGCCGCAGAGTGAGTCGACGAGTGAGGGCGAGGCCGATGACATGAATGGC GAGGAGGTCCGGACTCAGGTTGAGGGTCTGTCGAGGGCCTTTTTGGTACGGACAAGTCTGGCTGGGCTGGGTTTT GCCATGTCTGTTTTGGGAATCTGGGGTGATGGTGTGCCTCAGAGTCTTGTCTTTGTGTCGTGA |
| Transcript | >OphauB2|4323 ATGGCGTGCGCGGGAGCCAGAGCCCTTTCTGTGCTCAAGTTTGTGGGCACTGTGTCCCTCGGTTTGTTGACGGGC GTCTCCTACACCGTTTCGGCTGTGTCGCTGCCTAGTCTTCTCTCCCTGCCGTCATCGGCCTCGGCCTCACATGCC ATTACGTCGCTTACCACGGGCCTCAAGACGCCGCTGACGGTGCTTACGGCTCTCGCATCCGGCCCGCTCCTTGTT TCCTTTATTTTGTCTCCGCGATCGGTTCGACACCCGTATCTGGCCTATACGTCGCTGCTTGCTGGGCTTTCAATG GCTGTGCCGCTTCTCTTGCCTCAGCCGCAGCCGCGCCAGTCGGCTGCCAAGAAGCAGGCTCGTCGGTCCAAGATG GAAGCAAGCTACGAGGTGCTGGGTGAGCCGCAGAGTGAGTCGACGAGTGAGGGCGAGGCCGATGACATGAATGGC GAGGAGGTCCGGACTCAGGTTGAGGGTCTGTCGAGGGCCTTTTTGGTACGGACAAGTCTGGCTGGGCTGGGTTTT GCCATGTCTGTTTTGGGAATCTGGGGTGATGGTGTGCCTCAGAGTCTTGTCTTTGTGTCGTGA |
| Gene | >OphauB2|4323 ATGGCGTGCGCGGGAGCCAGAGCCCTTTCTGTGCTCAAGTTTGTGGGCACTGTGTCCCTCGGTTTGTTGACGGTA CGTCGCTCGGGCCGTCGCCTGTTGAGCTTTGCTCGTGTCATGCTAATTCATGCTGGCGGGTGCAGGGCGTCTCCT ACACCGTTTCGGCTGTGTCGCTGCCTAGTCTTCTCTCCCTGCCGTCATCGGCCTCGGCCTCACATGCCATTACGT CGCTTACCACGGGCCTCAAGACGCCGCTGACGGTGCTTACGGCTCTCGCATCCGGCCCGCTCCTTGTTTCCTTTA TTTTGTCTCCGCGATCGGTTCGACACCCGTATCTGGCCTATACGTCGCTGCTTGCTGGGCTTTCAATGGCTGTGC CGCTTCTCTTGCCTCAGCCGCAGCCGCGCCAGTCGGCTGCCAAGAAGCAGGCTCGTCGGTCCAAGATGGAAGCAA GCTACGAGGTGCTGGGTGAGCCGCAGAGTGAGTCGACGAGTGAGGGCGAGGCCGATGACATGAATGGCGAGGAGG TCCGGACTCAGGTTGAGGGTCTGTCGAGGGCCTTTTTGGTACGGACAAGTCTGGCTGGGCTGGGTTTTGCCATGT CTGTTTTGGGAATCTGGGGTGATGGTGTGCCTCAGAGTCTTGTCTTTGTGTCGTGA |