Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|4303
Gene name
LocationContig_29:38576..39759
Strand-
Gene length (bp)1183
Transcript length (bp)921
Coding sequence length (bp)921
Protein length (aa) 307

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 27 0.5

Transmembrane Domains

Domain # Start End Length
1 21 43 22
2 58 76 18
3 136 158 22
4 182 204 22
5 216 238 22
6 253 272 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|4303
MSSAPARPFVGHPDRVSEREYSVLALDAVFTLLATVVVVARFVTRSYCSKMKFWWDDWMILVALVAAVAFLVLGV
VDRTVGGAGYHVETYSRQQLTTFFQLSLSVTLVYNISLTFSKASCLFLYERIFYINRRVRLCTRVIMVVLAAYLL
SASFGLIFTTNPVQAQWKYWIPHTTIDKLPFYIVIGVANLVLDIVILIMPQTIVWKLHQSLKKRISIAAVFMLGA
FVCVASIVRITALLTIKTNDVTYSFHDATIWTLIEMNLSIICACLPIMPKTITLFKQKFEDQEILIYNGKIFLFT
GISGFA*
Coding >OphauB2|4303
ATGTCCAGCGCGCCCGCCCGCCCGTTTGTGGGGCATCCCGACCGCGTCAGTGAGCGTGAATACAGTGTCCTTGCC
CTCGACGCCGTCTTCACTCTCTTAGCCACCGTGGTGGTGGTTGCGCGCTTCGTCACGCGGAGTTATTGCTCCAAG
ATGAAGTTTTGGTGGGACGACTGGATGATTCTCGTGGCCTTGGTGGCGGCTGTTGCGTTTTTGGTGCTGGGTGTT
GTGGATAGAACGGTTGGTGGTGCGGGCTATCATGTCGAGACTTATAGCCGCCAGCAGCTCACCACTTTTTTCCAG
CTATCGCTCTCTGTGACTCTGGTGTACAACATTAGCCTCACTTTTTCCAAAGCTTCCTGCTTGTTCTTGTACGAG
CGCATATTCTACATTAACCGCAGAGTACGGCTCTGCACACGCGTCATCATGGTTGTGCTTGCTGCATACCTCTTG
TCGGCGTCGTTTGGCCTCATCTTTACAACAAATCCCGTCCAGGCCCAATGGAAGTACTGGATTCCACACACCACT
ATTGACAAACTGCCGTTTTACATTGTCATTGGCGTGGCAAATCTCGTCTTGGATATAGTCATTCTCATCATGCCT
CAAACCATTGTATGGAAACTCCACCAGTCACTTAAAAAGAGAATATCAATCGCTGCAGTCTTTATGCTCGGCGCC
TTCGTGTGCGTTGCAAGTATTGTGAGAATCACTGCCCTTCTCACCATCAAAACCAACGACGTGACGTACAGCTTT
CACGATGCCACGATTTGGACCTTGATTGAAATGAATCTGTCAATCATTTGCGCCTGCTTACCCATTATGCCCAAA
ACAATTACATTATTCAAGCAAAAATTCGAAGACCAAGAAATCCTCATCTACAACGGCAAAATCTTCCTTTTCACA
GGCATCTCAGGTTTTGCCTGA
Transcript >OphauB2|4303
ATGTCCAGCGCGCCCGCCCGCCCGTTTGTGGGGCATCCCGACCGCGTCAGTGAGCGTGAATACAGTGTCCTTGCC
CTCGACGCCGTCTTCACTCTCTTAGCCACCGTGGTGGTGGTTGCGCGCTTCGTCACGCGGAGTTATTGCTCCAAG
ATGAAGTTTTGGTGGGACGACTGGATGATTCTCGTGGCCTTGGTGGCGGCTGTTGCGTTTTTGGTGCTGGGTGTT
GTGGATAGAACGGTTGGTGGTGCGGGCTATCATGTCGAGACTTATAGCCGCCAGCAGCTCACCACTTTTTTCCAG
CTATCGCTCTCTGTGACTCTGGTGTACAACATTAGCCTCACTTTTTCCAAAGCTTCCTGCTTGTTCTTGTACGAG
CGCATATTCTACATTAACCGCAGAGTACGGCTCTGCACACGCGTCATCATGGTTGTGCTTGCTGCATACCTCTTG
TCGGCGTCGTTTGGCCTCATCTTTACAACAAATCCCGTCCAGGCCCAATGGAAGTACTGGATTCCACACACCACT
ATTGACAAACTGCCGTTTTACATTGTCATTGGCGTGGCAAATCTCGTCTTGGATATAGTCATTCTCATCATGCCT
CAAACCATTGTATGGAAACTCCACCAGTCACTTAAAAAGAGAATATCAATCGCTGCAGTCTTTATGCTCGGCGCC
TTCGTGTGCGTTGCAAGTATTGTGAGAATCACTGCCCTTCTCACCATCAAAACCAACGACGTGACGTACAGCTTT
CACGATGCCACGATTTGGACCTTGATTGAAATGAATCTGTCAATCATTTGCGCCTGCTTACCCATTATGCCCAAA
ACAATTACATTATTCAAGCAAAAATTCGAAGACCAAGAAATCCTCATCTACAACGGCAAAATCTTCCTTTTCACA
GGCATCTCAGGTTTTGCCTGA
Gene >OphauB2|4303
ATGTCCAGCGCGCCCGCCCGCCCGTTTGTGGGGCATCCCGACCGCGTCAGTGAGCGTGAATACAGTGTCCTTGCC
CTCGACGCCGTCTTCACTCTCTTAGCCACCGTGGTGGTGGTTGCGCGCTTCGTCACGCGGAGTTATTGCTCCAAG
ATGAAGTTTTGGTGGGACGACTGGATGATTCTCGTGGCCTTGGTGGCGGCTGTTGCGTTTTTGGTGCTGGGTGTT
GTGGATAGAACGGTTGGTGGTGCGGGCTATCATGTCGAGACTTATAGCCGCCAGCAGCTCACCACTTTTTTCCAG
GTAAGAAGCAAGCCTTTTCTATTGTACCAGTTTGAAAGATTTCATGGCCAACGTGGTATTTGGTTTAGCTATCGC
TCTCTGTGACTCTGGTGTACAACATTAGCCTCACTTTTTCCAAAGCTTCCTGCTTGTTCTTGTACGAGCGCATAT
TCTACATTAACCGCAGAGTACGGCTCTGCACACGCGTCATCATGGTTGTGCTTGCTGCATACCTCTTGTCGGCGT
CGTTTGGCCTCATCTTTACAACAAATCCCGTCCAGGCCCAATGGAAGTACTGGATTCCACACACCACTATTGACA
AACTGCCGTTTTACATTGTCATTGGCGTGGCAAATCTCGTCTTGGATATAGTCATTCTCATCATGCCTCAAACCA
TTGTATGGAAACTCCACCAGTCACTTAAAAAGAGAATATCAATCGCTGCAGTCTTTATGCTCGGCGCCTTGTGAG
TTGTCTCTTATCCCCGCCTGCCGGCATACCAAGCACCTGCTAACCTGGCCCTTGGCAGCGTGTGCGTTGCAAGTA
TTGTGAGAATCACTGCCCTTCTCACCATCAAAACCAACGACGTGACGTGTAAGCATCATGGCCGCCCCGGGGTTT
TGCTTCTAGACTGACTAGCGTCTACAGACAGCTTTCACGATGCCACGATTTGGACCTTGATTGAAATGAATCTGT
CAATCATTTGCGCCTGCTTACCCATTATGCCCAAAACAATTACATTATTCAAGCAAAAGTATGGGAAATTGGCTT
CAAAGCCGACTGGCTCGCAAGAAGCGCTCAAGGGAGAGGCCGATTATTGGCGCTCTGCAGATTCGAAGACCAAGA
AATCCTCATCTACAACGGCAAAATCTTCCTTTTCACAGGCATCTCAGGTTTTGCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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