© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|4301 |
| Gene name | |
| Location | Contig_29:34311..36234 |
| Strand | + |
| Gene length (bp) | 1923 |
| Transcript length (bp) | 1752 |
| Coding sequence length (bp) | 1752 |
| Protein length (aa) | 584 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01565 | FAD_binding_4 | FAD binding domain | 7.3E-21 | 127 | 265 |
| PF08031 | BBE | Berberine and berberine like | 1.5E-11 | 523 | 566 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|D4AS41|A7056_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_07056 PE=1 SV=2 | 12 | 582 | 9.0E-96 |
| sp|D4B1Z7|A2478_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02478 PE=1 SV=1 | 34 | 569 | 7.0E-82 |
| sp|P08159|HDNO_ARTOX | 6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxydans PE=1 SV=2 | 133 | 298 | 5.0E-11 |
| sp|Q9FZC6|FOX3_ARATH | Flavin-dependent oxidoreductase FOX3 OS=Arabidopsis thaliana GN=FOX3 PE=3 SV=1 | 112 | 291 | 5.0E-08 |
| sp|Q9FZC4|FOX1_ARATH | Flavin-dependent oxidoreductase FOX1 OS=Arabidopsis thaliana GN=FOX1 PE=2 SV=1 | 112 | 291 | 1.0E-07 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|D4AS41|A7056_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_07056 PE=1 SV=2 | 12 | 582 | 9.0E-96 |
| sp|D4B1Z7|A2478_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02478 PE=1 SV=1 | 34 | 569 | 7.0E-82 |
| sp|P08159|HDNO_ARTOX | 6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxydans PE=1 SV=2 | 133 | 298 | 5.0E-11 |
| sp|Q9FZC6|FOX3_ARATH | Flavin-dependent oxidoreductase FOX3 OS=Arabidopsis thaliana GN=FOX3 PE=3 SV=1 | 112 | 291 | 5.0E-08 |
| sp|Q9FZC4|FOX1_ARATH | Flavin-dependent oxidoreductase FOX1 OS=Arabidopsis thaliana GN=FOX1 PE=2 SV=1 | 112 | 291 | 1.0E-07 |
| sp|O06997|YVDP_BACSU | Uncharacterized FAD-linked oxidoreductase YvdP OS=Bacillus subtilis (strain 168) GN=yvdP PE=1 SV=1 | 240 | 560 | 8.0E-07 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0050660 | flavin adenine dinucleotide binding | Yes |
| GO:0016491 | oxidoreductase activity | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005488 | binding | No |
| GO:0036094 | small molecule binding | No |
| GO:0043168 | anion binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0043167 | ion binding | No |
| GO:0000166 | nucleotide binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 24 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|4301 MFCSVKIRLLFAHLLLLLPLAVAQNSTASKSTCRCIPGDSCWPSHHAWSQLNDTIHGRLIKTTPLAAVCHEPHYD EQACKSLAEAWSLPQTLYPHASEIMSPYWQNQSCDPFTPRSNACHVGNYVEYAVNVASANHVSKALQFAQKHNVR VVIKNTGHDYIGKSTGKGSLGLWTHNMKEMTFLNYSSPEYTGPAVKMGAGVQAFEAYTAAASHGLRVVGGACATV GLSGGFLQGGGHSPLSSMHGMGADQTLEWEVVTATGRHLVASPTQNQDLYWALSGGGGGTYGVVISVTVKAFQDG IVGGASLQINKADTTDEVFWKGVEEFFAWVPEMVDSGSTALFSLSNTSFVVVPLTAPGKSQDEVRDLLEPLVCKM KELDISMTTSVTSFPTYLEHFDHHLGPLPYGLPFVNIVDVSIGGRLIPRSVLQDAASNLAFIEALKLSVQPGGKY QTGGLALNAAHSVAGNDASSNAVLPAWRSSAVQILAFAPWDFKASLGSNLAGNDYLNQVTVPALTAVAPEGGAYL NEANLGQHDWQQVFYGANYDRLRSIKNKYDPRDLFFANTAVGSEAWTPDGQGRLCRSA* |
| Coding | >OphauB2|4301 ATGTTTTGCTCGGTCAAGATTCGTCTCTTGTTTGCACATTTGCTGCTCCTGCTTCCTTTAGCAGTGGCGCAGAAC TCGACAGCTTCAAAGTCGACTTGTCGCTGCATCCCAGGGGATTCTTGCTGGCCAAGCCACCATGCGTGGTCGCAA CTTAATGATACGATACACGGAAGACTAATCAAGACGACGCCCCTCGCAGCAGTGTGCCATGAGCCGCATTACGAC GAGCAAGCATGCAAGTCTCTAGCAGAAGCGTGGTCGCTGCCTCAAACTTTATATCCCCATGCCTCTGAAATCATG TCGCCCTACTGGCAGAATCAGAGCTGTGACCCATTTACGCCTCGGTCCAATGCGTGCCATGTCGGCAATTACGTC GAGTATGCCGTCAATGTTGCTTCTGCCAACCATGTTTCCAAAGCTCTGCAGTTTGCACAGAAACACAATGTCCGC GTTGTCATTAAGAATACTGGACACGATTATATTGGAAAATCGACTGGAAAGGGCTCTCTGGGTCTTTGGACTCAC AACATGAAGGAAATGACGTTTCTCAATTATTCCAGCCCCGAGTATACTGGCCCCGCAGTAAAGATGGGAGCCGGA GTCCAAGCCTTTGAAGCCTATACAGCAGCAGCGTCTCATGGCCTCCGAGTTGTAGGCGGTGCATGTGCCACTGTC GGCCTATCTGGTGGATTTCTCCAAGGCGGTGGCCACTCCCCCCTGAGCTCCATGCATGGAATGGGCGCAGACCAG ACTCTTGAATGGGAAGTGGTGACGGCTACTGGAAGACACCTTGTCGCGTCACCCACGCAAAACCAAGATTTATAC TGGGCGCTTAGCGGAGGCGGCGGCGGCACGTACGGCGTCGTCATTTCGGTCACTGTAAAGGCTTTCCAGGACGGC ATCGTCGGGGGCGCATCTCTGCAAATCAACAAGGCGGACACGACCGACGAGGTGTTTTGGAAAGGCGTCGAGGAA TTCTTTGCCTGGGTGCCCGAAATGGTAGACTCTGGAAGCACAGCCCTCTTTTCCCTCTCCAACACCAGCTTTGTC GTCGTTCCCCTAACGGCACCAGGCAAGAGCCAAGACGAGGTGAGGGACCTGCTAGAGCCTCTTGTTTGCAAGATG AAGGAGCTGGACATTTCCATGACCACCTCGGTCACTTCATTCCCTACATACTTGGAGCATTTCGACCACCATTTG GGCCCCTTGCCCTACGGTCTTCCCTTTGTCAACATTGTCGACGTCTCTATTGGCGGACGACTCATCCCCCGCAGT GTTTTGCAAGACGCTGCTTCCAACCTGGCTTTCATCGAGGCGCTCAAGCTCAGCGTGCAGCCCGGCGGCAAGTAT CAGACGGGCGGCCTGGCGCTCAACGCGGCACACTCGGTTGCCGGCAACGACGCGTCCTCCAACGCCGTCTTGCCA GCGTGGCGCAGCAGCGCGGTACAGATTCTGGCTTTTGCGCCGTGGGATTTTAAAGCGTCCCTGGGGAGTAATTTA GCGGGCAATGACTACCTCAACCAGGTTACGGTGCCGGCGCTGACAGCGGTTGCGCCAGAGGGCGGTGCTTATTTG AATGAAGCAAATCTCGGGCAGCATGACTGGCAGCAAGTGTTTTACGGGGCAAACTACGACAGGCTACGCAGCATC AAGAACAAGTATGACCCTCGAGACTTGTTTTTTGCCAATACGGCGGTGGGCAGTGAAGCTTGGACTCCAGATGGC CAAGGACGGTTGTGTAGAAGCGCATAA |
| Transcript | >OphauB2|4301 ATGTTTTGCTCGGTCAAGATTCGTCTCTTGTTTGCACATTTGCTGCTCCTGCTTCCTTTAGCAGTGGCGCAGAAC TCGACAGCTTCAAAGTCGACTTGTCGCTGCATCCCAGGGGATTCTTGCTGGCCAAGCCACCATGCGTGGTCGCAA CTTAATGATACGATACACGGAAGACTAATCAAGACGACGCCCCTCGCAGCAGTGTGCCATGAGCCGCATTACGAC GAGCAAGCATGCAAGTCTCTAGCAGAAGCGTGGTCGCTGCCTCAAACTTTATATCCCCATGCCTCTGAAATCATG TCGCCCTACTGGCAGAATCAGAGCTGTGACCCATTTACGCCTCGGTCCAATGCGTGCCATGTCGGCAATTACGTC GAGTATGCCGTCAATGTTGCTTCTGCCAACCATGTTTCCAAAGCTCTGCAGTTTGCACAGAAACACAATGTCCGC GTTGTCATTAAGAATACTGGACACGATTATATTGGAAAATCGACTGGAAAGGGCTCTCTGGGTCTTTGGACTCAC AACATGAAGGAAATGACGTTTCTCAATTATTCCAGCCCCGAGTATACTGGCCCCGCAGTAAAGATGGGAGCCGGA GTCCAAGCCTTTGAAGCCTATACAGCAGCAGCGTCTCATGGCCTCCGAGTTGTAGGCGGTGCATGTGCCACTGTC GGCCTATCTGGTGGATTTCTCCAAGGCGGTGGCCACTCCCCCCTGAGCTCCATGCATGGAATGGGCGCAGACCAG ACTCTTGAATGGGAAGTGGTGACGGCTACTGGAAGACACCTTGTCGCGTCACCCACGCAAAACCAAGATTTATAC TGGGCGCTTAGCGGAGGCGGCGGCGGCACGTACGGCGTCGTCATTTCGGTCACTGTAAAGGCTTTCCAGGACGGC ATCGTCGGGGGCGCATCTCTGCAAATCAACAAGGCGGACACGACCGACGAGGTGTTTTGGAAAGGCGTCGAGGAA TTCTTTGCCTGGGTGCCCGAAATGGTAGACTCTGGAAGCACAGCCCTCTTTTCCCTCTCCAACACCAGCTTTGTC GTCGTTCCCCTAACGGCACCAGGCAAGAGCCAAGACGAGGTGAGGGACCTGCTAGAGCCTCTTGTTTGCAAGATG AAGGAGCTGGACATTTCCATGACCACCTCGGTCACTTCATTCCCTACATACTTGGAGCATTTCGACCACCATTTG GGCCCCTTGCCCTACGGTCTTCCCTTTGTCAACATTGTCGACGTCTCTATTGGCGGACGACTCATCCCCCGCAGT GTTTTGCAAGACGCTGCTTCCAACCTGGCTTTCATCGAGGCGCTCAAGCTCAGCGTGCAGCCCGGCGGCAAGTAT CAGACGGGCGGCCTGGCGCTCAACGCGGCACACTCGGTTGCCGGCAACGACGCGTCCTCCAACGCCGTCTTGCCA GCGTGGCGCAGCAGCGCGGTACAGATTCTGGCTTTTGCGCCGTGGGATTTTAAAGCGTCCCTGGGGAGTAATTTA GCGGGCAATGACTACCTCAACCAGGTTACGGTGCCGGCGCTGACAGCGGTTGCGCCAGAGGGCGGTGCTTATTTG AATGAAGCAAATCTCGGGCAGCATGACTGGCAGCAAGTGTTTTACGGGGCAAACTACGACAGGCTACGCAGCATC AAGAACAAGTATGACCCTCGAGACTTGTTTTTTGCCAATACGGCGGTGGGCAGTGAAGCTTGGACTCCAGATGGC CAAGGACGGTTGTGTAGAAGCGCATAA |
| Gene | >OphauB2|4301 ATGTTTTGCTCGGTCAAGATTCGTCTCTTGTTTGCACATTTGCTGCTCCTGCTTCCTTTAGCAGTGGCGCAGAAC TCGACAGCTTCAAAGTCGACTTGTCGCTGCATCCCAGGGGATTCTTGCTGGCCAAGCCACCATGCGTGGTCGCAA CTTAATGATACGATACACGGAAGACTAATCAAGACGACGCCCCTCGCAGCAGTGTGCCATGAGCCGCATTACGAC GAGCAAGCATGCAAGTCTCTAGCAGAAGCGTGGTCGCTGCCTCAAACTTTGTATGGAAACATTATGCAGCCTGGA CAAGACTTTTTTTTTACTAAAATCCAAGGCTAGATATCCCCATGCCTCTGAAATCATGTCGCCCTACTGGCAGAA TCAGAGCTGTGACCCATTTACGCCTCGGTCCAATGCGTGCCATGTCGGCAATTACGTCGAGTATGCCGTCAATGT TGCTTCTGCCAACCATGTTTCCAAAGCTCTGCAGTTTGCACAGAAACACAATGTCCGCGTTGTCATTAAGAATAC TGGACACGAGTTTGTTTATCTCTACCTTGCAACTAGAGTCGAAAACTAATCGTTGCTAGTTATATTGGAAAATCG ACTGGAAAGGGCTCTCTGGGTCTTTGGACTCACAACATGAAGGAAATGACGTTTCTCAATTATTCCAGCCCCGAG TATACTGGCCCCGCAGTAAAGATGGGAGGTGAGTAGCCATGAACCGCCAGCCCTTTCCCATTGCTCTAAGCAGCC TACTAAGACTCTGCAGCCGGAGTCCAAGCCTTTGAAGCCTATACAGCAGCAGCGTCTCATGGCCTCCGAGTTGTA GGCGGTGCATGTGCCACTGTCGGCCTATCTGGTGGATTTCTCCAAGGCGGTGGCCACTCCCCCCTGAGCTCCATG CATGGAATGGGCGCAGACCAGACTCTTGAATGGGAAGTGGTGACGGCTACTGGAAGACACCTTGTCGCGTCACCC ACGCAAAACCAAGATTTATACTGGGCGCTTAGCGGAGGCGGCGGCGGCACGTACGGCGTCGTCATTTCGGTCACT GTAAAGGCTTTCCAGGACGGCATCGTCGGGGGCGCATCTCTGCAAATCAACAAGGCGGACACGACCGACGAGGTG TTTTGGAAAGGCGTCGAGGAATTCTTTGCCTGGGTGCCCGAAATGGTAGACTCTGGAAGCACAGCCCTCTTTTCC CTCTCCAACACCAGCTTTGTCGTCGTTCCCCTAACGGCACCAGGCAAGAGCCAAGACGAGGTGAGGGACCTGCTA GAGCCTCTTGTTTGCAAGATGAAGGAGCTGGACATTTCCATGACCACCTCGGTCACTTCATTCCCTACATACTTG GAGCATTTCGACCACCATTTGGGCCCCTTGCCCTACGGTCTTCCCTTTGTCAACATTGTCGACGTCTCTATTGGC GGACGACTCATCCCCCGCAGTGTTTTGCAAGACGCTGCTTCCAACCTGGCTTTCATCGAGGCGCTCAAGCTCAGC GTGCAGCCCGGCGGCAAGTATCAGACGGGCGGCCTGGCGCTCAACGCGGCACACTCGGTTGCCGGCAACGACGCG TCCTCCAACGCCGTCTTGCCAGCGTGGCGCAGCAGCGCGGTACAGATTCTGGCTTTTGCGCCGTGGGATTTTAAA GCGTCCCTGGGGAGTAATTTAGCGGGCAATGACTACCTCAACCAGGTTACGGTGCCGGCGCTGACAGCGGTTGCG CCAGAGGGCGGTGCTTATTTGAATGAAGCAAATCTCGGGCAGCATGACTGGCAGCAAGTGTTTTACGGGGCAAAC TACGACAGGCTACGCAGCATCAAGAACAAGTATGACCCTCGAGACTTGTTTTTTGCCAATACGGCGGTGGGCAGT GAAGCTTGGACTCCAGATGGCCAAGGACGGTTGTGTAGAAGCGCATAA |