© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|4293 |
| Gene name | |
| Location | Contig_29:13595..15125 |
| Strand | - |
| Gene length (bp) | 1530 |
| Transcript length (bp) | 1530 |
| Coding sequence length (bp) | 1530 |
| Protein length (aa) | 510 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01375 | Enterotoxin_a | Heat-labile enterotoxin alpha chain | 1.3E-07 | 42 | 206 |
| PF01375 | Enterotoxin_a | Heat-labile enterotoxin alpha chain | 5.9E-07 | 254 | 402 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P01555|CHTA_VIBCH | Cholera enterotoxin subunit A OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=ctxA PE=1 SV=1 | 40 | 175 | 2.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0090729 | toxin activity | Yes |
| GO:0005615 | extracellular space | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 26 | 0.999357 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 29 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 2 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|4293 MIFSRFANVAAPASLLCLFWLGYGNASIVPHAPNAVMRRAPDDFVYRGDTRGPDKVRPDGGFQPSGYYWNNPSAF NIHRHVRGDPVFMPRSGSSSGESNSLRRSRCSSSSSCPDWADAYVSTAVLANEAAIFAYPDEDGNFGYLYRIHIT PNMLTVQSQHEREVAALGGIPWSAVSAYTQLRSRDEEFPSVIPESRWTENPDFDPEWNRFSTAMTASTLLEGPDA MTTAITLMDRPSIGGPMGWSGQFPLFGDHHFVYRGDARSPQEIAQDGGFQPQGDGWQNQGSAFHFDRHYAAGPNG CGLEESGNSGFVFRTAYVTLEQDRDVAETQGSWLYEIRATPNMIDDNNPETDVFALGGVHWSQIRRYTNMTGNPG ERHRVDEAAWINNPNYDAATYQRGESAVFARVNGNFPEVLRNGNTDSGGSDGPSCDRDRRAMAAARNFMTHTRGM RDLYGPFPPRFSRYPAIDGIPGPGPPPPPETVDAQGKKNSFSQKTMQKHPHYSSCANNC* |
| Coding | >OphauB2|4293 ATGATATTTTCACGGTTTGCCAATGTGGCCGCTCCAGCATCACTACTATGTCTTTTCTGGCTCGGTTATGGAAAT GCTAGCATCGTACCACACGCACCCAACGCGGTGATGCGCCGCGCACCGGATGACTTTGTCTACCGCGGAGACACA AGAGGTCCAGATAAAGTTCGCCCGGATGGTGGCTTTCAACCCTCAGGCTACTATTGGAACAACCCGTCAGCCTTC AACATTCACCGACATGTAAGGGGTGATCCTGTATTTATGCCCAGGTCAGGCAGCAGCAGCGGAGAGTCGAATTCG CTGCGACGGTCAAGGTGTTCTTCTTCCAGTTCCTGCCCAGATTGGGCCGACGCCTATGTGTCAACGGCAGTTTTG GCCAACGAGGCAGCCATTTTTGCCTATCCAGACGAGGATGGCAATTTTGGATACTTGTACCGGATTCATATTACG CCGAATATGCTCACAGTACAAAGCCAACATGAACGCGAAGTGGCTGCCCTAGGAGGTATCCCTTGGTCGGCAGTA TCGGCTTACACACAGCTTAGAAGCCGAGATGAAGAGTTTCCCAGTGTCATTCCAGAGAGCCGGTGGACAGAAAAC CCCGACTTTGACCCCGAATGGAATAGGTTTTCCACAGCCATGACCGCGTCTACTCTCTTGGAGGGGCCCGACGCC ATGACCACAGCCATAACCTTGATGGACCGGCCCAGCATTGGTGGCCCCATGGGTTGGAGTGGGCAGTTCCCGCTG TTTGGCGATCATCATTTCGTCTACCGTGGAGATGCAAGAAGCCCTCAAGAAATAGCACAAGACGGCGGATTCCAG CCTCAAGGCGACGGCTGGCAAAACCAAGGATCGGCATTCCATTTCGATCGACACTATGCTGCGGGTCCTAATGGT TGCGGATTAGAAGAGTCTGGCAACTCTGGCTTCGTCTTTCGAACTGCCTATGTTACACTGGAACAAGACAGAGAC GTGGCGGAAACTCAAGGCTCCTGGCTCTACGAGATTCGTGCCACGCCAAACATGATTGATGACAATAATCCTGAA ACAGACGTTTTTGCTCTGGGCGGTGTTCACTGGTCGCAAATTAGGAGATATACAAACATGACGGGGAATCCAGGG GAGCGTCACAGAGTCGATGAAGCTGCTTGGATCAACAATCCAAACTACGACGCTGCAACATACCAACGGGGCGAA TCTGCCGTTTTTGCTCGCGTCAATGGAAACTTTCCAGAAGTATTAAGAAATGGCAATACAGACTCTGGCGGCTCT GATGGCCCGAGCTGCGACCGGGACCGTCGCGCAATGGCAGCAGCACGTAATTTCATGACCCATACCAGGGGTATG CGTGATCTTTATGGCCCTTTTCCGCCCCGCTTCTCGCGATACCCAGCTATAGACGGTATTCCCGGACCAGGTCCC CCACCTCCCCCCGAAACTGTGGATGCGCAGGGTAAGAAGAACTCCTTTTCGCAAAAGACTATGCAAAAGCATCCT CATTACAGCAGTTGCGCTAACAATTGTTAA |
| Transcript | >OphauB2|4293 ATGATATTTTCACGGTTTGCCAATGTGGCCGCTCCAGCATCACTACTATGTCTTTTCTGGCTCGGTTATGGAAAT GCTAGCATCGTACCACACGCACCCAACGCGGTGATGCGCCGCGCACCGGATGACTTTGTCTACCGCGGAGACACA AGAGGTCCAGATAAAGTTCGCCCGGATGGTGGCTTTCAACCCTCAGGCTACTATTGGAACAACCCGTCAGCCTTC AACATTCACCGACATGTAAGGGGTGATCCTGTATTTATGCCCAGGTCAGGCAGCAGCAGCGGAGAGTCGAATTCG CTGCGACGGTCAAGGTGTTCTTCTTCCAGTTCCTGCCCAGATTGGGCCGACGCCTATGTGTCAACGGCAGTTTTG GCCAACGAGGCAGCCATTTTTGCCTATCCAGACGAGGATGGCAATTTTGGATACTTGTACCGGATTCATATTACG CCGAATATGCTCACAGTACAAAGCCAACATGAACGCGAAGTGGCTGCCCTAGGAGGTATCCCTTGGTCGGCAGTA TCGGCTTACACACAGCTTAGAAGCCGAGATGAAGAGTTTCCCAGTGTCATTCCAGAGAGCCGGTGGACAGAAAAC CCCGACTTTGACCCCGAATGGAATAGGTTTTCCACAGCCATGACCGCGTCTACTCTCTTGGAGGGGCCCGACGCC ATGACCACAGCCATAACCTTGATGGACCGGCCCAGCATTGGTGGCCCCATGGGTTGGAGTGGGCAGTTCCCGCTG TTTGGCGATCATCATTTCGTCTACCGTGGAGATGCAAGAAGCCCTCAAGAAATAGCACAAGACGGCGGATTCCAG CCTCAAGGCGACGGCTGGCAAAACCAAGGATCGGCATTCCATTTCGATCGACACTATGCTGCGGGTCCTAATGGT TGCGGATTAGAAGAGTCTGGCAACTCTGGCTTCGTCTTTCGAACTGCCTATGTTACACTGGAACAAGACAGAGAC GTGGCGGAAACTCAAGGCTCCTGGCTCTACGAGATTCGTGCCACGCCAAACATGATTGATGACAATAATCCTGAA ACAGACGTTTTTGCTCTGGGCGGTGTTCACTGGTCGCAAATTAGGAGATATACAAACATGACGGGGAATCCAGGG GAGCGTCACAGAGTCGATGAAGCTGCTTGGATCAACAATCCAAACTACGACGCTGCAACATACCAACGGGGCGAA TCTGCCGTTTTTGCTCGCGTCAATGGAAACTTTCCAGAAGTATTAAGAAATGGCAATACAGACTCTGGCGGCTCT GATGGCCCGAGCTGCGACCGGGACCGTCGCGCAATGGCAGCAGCACGTAATTTCATGACCCATACCAGGGGTATG CGTGATCTTTATGGCCCTTTTCCGCCCCGCTTCTCGCGATACCCAGCTATAGACGGTATTCCCGGACCAGGTCCC CCACCTCCCCCCGAAACTGTGGATGCGCAGGGTAAGAAGAACTCCTTTTCGCAAAAGACTATGCAAAAGCATCCT CATTACAGCAGTTGCGCTAACAATTGTTAA |
| Gene | >OphauB2|4293 ATGATATTTTCACGGTTTGCCAATGTGGCCGCTCCAGCATCACTACTATGTCTTTTCTGGCTCGGTTATGGAAAT GCTAGCATCGTACCACACGCACCCAACGCGGTGATGCGCCGCGCACCGGATGACTTTGTCTACCGCGGAGACACA AGAGGTCCAGATAAAGTTCGCCCGGATGGTGGCTTTCAACCCTCAGGCTACTATTGGAACAACCCGTCAGCCTTC AACATTCACCGACATGTAAGGGGTGATCCTGTATTTATGCCCAGGTCAGGCAGCAGCAGCGGAGAGTCGAATTCG CTGCGACGGTCAAGGTGTTCTTCTTCCAGTTCCTGCCCAGATTGGGCCGACGCCTATGTGTCAACGGCAGTTTTG GCCAACGAGGCAGCCATTTTTGCCTATCCAGACGAGGATGGCAATTTTGGATACTTGTACCGGATTCATATTACG CCGAATATGCTCACAGTACAAAGCCAACATGAACGCGAAGTGGCTGCCCTAGGAGGTATCCCTTGGTCGGCAGTA TCGGCTTACACACAGCTTAGAAGCCGAGATGAAGAGTTTCCCAGTGTCATTCCAGAGAGCCGGTGGACAGAAAAC CCCGACTTTGACCCCGAATGGAATAGGTTTTCCACAGCCATGACCGCGTCTACTCTCTTGGAGGGGCCCGACGCC ATGACCACAGCCATAACCTTGATGGACCGGCCCAGCATTGGTGGCCCCATGGGTTGGAGTGGGCAGTTCCCGCTG TTTGGCGATCATCATTTCGTCTACCGTGGAGATGCAAGAAGCCCTCAAGAAATAGCACAAGACGGCGGATTCCAG CCTCAAGGCGACGGCTGGCAAAACCAAGGATCGGCATTCCATTTCGATCGACACTATGCTGCGGGTCCTAATGGT TGCGGATTAGAAGAGTCTGGCAACTCTGGCTTCGTCTTTCGAACTGCCTATGTTACACTGGAACAAGACAGAGAC GTGGCGGAAACTCAAGGCTCCTGGCTCTACGAGATTCGTGCCACGCCAAACATGATTGATGACAATAATCCTGAA ACAGACGTTTTTGCTCTGGGCGGTGTTCACTGGTCGCAAATTAGGAGATATACAAACATGACGGGGAATCCAGGG GAGCGTCACAGAGTCGATGAAGCTGCTTGGATCAACAATCCAAACTACGACGCTGCAACATACCAACGGGGCGAA TCTGCCGTTTTTGCTCGCGTCAATGGAAACTTTCCAGAAGTATTAAGAAATGGCAATACAGACTCTGGCGGCTCT GATGGCCCGAGCTGCGACCGGGACCGTCGCGCAATGGCAGCAGCACGTAATTTCATGACCCATACCAGGGGTATG CGTGATCTTTATGGCCCTTTTCCGCCCCGCTTCTCGCGATACCCAGCTATAGACGGTATTCCCGGACCAGGTCCC CCACCTCCCCCCGAAACTGTGGATGCGCAGGGTAAGAAGAACTCCTTTTCGCAAAAGACTATGCAAAAGCATCCT CATTACAGCAGTTGCGCTAACAATTGTTAA |