© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|4291 |
| Gene name | |
| Location | Contig_29:9964..10537 |
| Strand | + |
| Gene length (bp) | 573 |
| Transcript length (bp) | 573 |
| Coding sequence length (bp) | 573 |
| Protein length (aa) | 191 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05180 | zf-DNL | DNL zinc finger | 1.4E-26 | 99 | 161 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q09759|YA72_SCHPO | Uncharacterized protein C24H6.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC24H6.02c PE=3 SV=1 | 70 | 178 | 4.0E-23 |
| sp|P42844|ZIM17_YEAST | Mitochondrial protein import protein ZIM17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ZIM17 PE=1 SV=2 | 100 | 176 | 2.0E-18 |
| sp|A6ZSH0|ZIM17_YEAS7 | Mitochondrial protein import protein ZIM17 OS=Saccharomyces cerevisiae (strain YJM789) GN=ZIM17 PE=3 SV=2 | 100 | 176 | 2.0E-18 |
| sp|B5VQB0|ZIM17_YEAS6 | Mitochondrial protein import protein ZIM17 OS=Saccharomyces cerevisiae (strain AWRI1631) GN=ZIM17 PE=3 SV=2 | 100 | 176 | 2.0E-18 |
| sp|B3LPE4|ZIM17_YEAS1 | Mitochondrial protein import protein ZIM17 OS=Saccharomyces cerevisiae (strain RM11-1a) GN=ZIM17 PE=3 SV=2 | 100 | 176 | 2.0E-18 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q09759|YA72_SCHPO | Uncharacterized protein C24H6.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC24H6.02c PE=3 SV=1 | 70 | 178 | 4.0E-23 |
| sp|P42844|ZIM17_YEAST | Mitochondrial protein import protein ZIM17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ZIM17 PE=1 SV=2 | 100 | 176 | 2.0E-18 |
| sp|A6ZSH0|ZIM17_YEAS7 | Mitochondrial protein import protein ZIM17 OS=Saccharomyces cerevisiae (strain YJM789) GN=ZIM17 PE=3 SV=2 | 100 | 176 | 2.0E-18 |
| sp|B5VQB0|ZIM17_YEAS6 | Mitochondrial protein import protein ZIM17 OS=Saccharomyces cerevisiae (strain AWRI1631) GN=ZIM17 PE=3 SV=2 | 100 | 176 | 2.0E-18 |
| sp|B3LPE4|ZIM17_YEAS1 | Mitochondrial protein import protein ZIM17 OS=Saccharomyces cerevisiae (strain RM11-1a) GN=ZIM17 PE=3 SV=2 | 100 | 176 | 2.0E-18 |
| sp|Q5SXM8|DNLZ_HUMAN | DNL-type zinc finger protein OS=Homo sapiens GN=DNLZ PE=1 SV=1 | 84 | 176 | 1.0E-16 |
| sp|Q9D113|DNLZ_MOUSE | DNL-type zinc finger protein OS=Mus musculus GN=Dnlz PE=1 SV=1 | 97 | 190 | 1.0E-16 |
| sp|Q0IH40|DNLZ_XENLA | DNL-type zinc finger protein OS=Xenopus laevis GN=dnlz PE=2 SV=1 | 6 | 182 | 6.0E-15 |
| sp|A1L1P7|DNLZ_DANRE | DNL-type zinc finger protein OS=Danio rerio GN=dnlz PE=2 SV=1 | 97 | 190 | 2.0E-14 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008270 | zinc ion binding | Yes |
| GO:0046872 | metal ion binding | No |
| GO:0003674 | molecular_function | No |
| GO:0005488 | binding | No |
| GO:0043167 | ion binding | No |
| GO:0046914 | transition metal ion binding | No |
| GO:0043169 | cation binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|4291 MASSASNSLLSALFRTRTCRVSLKRAALATSPVACPSSWQRPLPAVSAASRFTYCRHAHSIPRPPSSTPRSVRPD AEPAAEGVTSQGPRPEIENPAYYQLSFTCVPCGHRSHHNVSKQAYHTGSCLITCPGCRNRHVISDHLGIFGKRGV TVEQLMREKGNLVKRGSLGEDGDIEFWPDEGEGKDDSTKP* |
| Coding | >OphauB2|4291 ATGGCATCCTCGGCTTCAAATTCCCTCTTGTCCGCCCTCTTCCGCACGCGCACCTGTCGCGTCTCGCTCAAACGC GCTGCTCTAGCCACCTCGCCCGTCGCTTGCCCAAGCTCCTGGCAACGTCCTTTGCCAGCCGTTTCAGCCGCCTCT CGATTCACATATTGTCGCCACGCACACTCAATACCCCGTCCCCCGTCCTCCACGCCTCGCTCCGTCCGCCCCGAT GCCGAACCCGCTGCCGAGGGCGTCACCAGCCAAGGCCCCCGTCCAGAGATTGAAAACCCAGCCTACTACCAGCTC TCCTTCACCTGTGTGCCCTGCGGCCATCGCTCTCACCACAACGTCTCCAAACAGGCCTATCACACTGGCTCCTGT CTCATCACCTGTCCCGGCTGTCGCAACCGCCACGTCATTAGCGACCACCTTGGCATCTTTGGCAAACGCGGCGTC ACTGTCGAGCAGCTCATGCGTGAAAAGGGAAATCTTGTCAAGAGAGGCAGCCTCGGCGAGGACGGCGACATTGAG TTTTGGCCTGATGAGGGAGAGGGCAAAGACGATTCTACAAAGCCGTGA |
| Transcript | >OphauB2|4291 ATGGCATCCTCGGCTTCAAATTCCCTCTTGTCCGCCCTCTTCCGCACGCGCACCTGTCGCGTCTCGCTCAAACGC GCTGCTCTAGCCACCTCGCCCGTCGCTTGCCCAAGCTCCTGGCAACGTCCTTTGCCAGCCGTTTCAGCCGCCTCT CGATTCACATATTGTCGCCACGCACACTCAATACCCCGTCCCCCGTCCTCCACGCCTCGCTCCGTCCGCCCCGAT GCCGAACCCGCTGCCGAGGGCGTCACCAGCCAAGGCCCCCGTCCAGAGATTGAAAACCCAGCCTACTACCAGCTC TCCTTCACCTGTGTGCCCTGCGGCCATCGCTCTCACCACAACGTCTCCAAACAGGCCTATCACACTGGCTCCTGT CTCATCACCTGTCCCGGCTGTCGCAACCGCCACGTCATTAGCGACCACCTTGGCATCTTTGGCAAACGCGGCGTC ACTGTCGAGCAGCTCATGCGTGAAAAGGGAAATCTTGTCAAGAGAGGCAGCCTCGGCGAGGACGGCGACATTGAG TTTTGGCCTGATGAGGGAGAGGGCAAAGACGATTCTACAAAGCCGTGA |
| Gene | >OphauB2|4291 ATGGCATCCTCGGCTTCAAATTCCCTCTTGTCCGCCCTCTTCCGCACGCGCACCTGTCGCGTCTCGCTCAAACGC GCTGCTCTAGCCACCTCGCCCGTCGCTTGCCCAAGCTCCTGGCAACGTCCTTTGCCAGCCGTTTCAGCCGCCTCT CGATTCACATATTGTCGCCACGCACACTCAATACCCCGTCCCCCGTCCTCCACGCCTCGCTCCGTCCGCCCCGAT GCCGAACCCGCTGCCGAGGGCGTCACCAGCCAAGGCCCCCGTCCAGAGATTGAAAACCCAGCCTACTACCAGCTC TCCTTCACCTGTGTGCCCTGCGGCCATCGCTCTCACCACAACGTCTCCAAACAGGCCTATCACACTGGCTCCTGT CTCATCACCTGTCCCGGCTGTCGCAACCGCCACGTCATTAGCGACCACCTTGGCATCTTTGGCAAACGCGGCGTC ACTGTCGAGCAGCTCATGCGTGAAAAGGGAAATCTTGTCAAGAGAGGCAGCCTCGGCGAGGACGGCGACATTGAG TTTTGGCCTGATGAGGGAGAGGGCAAAGACGATTCTACAAAGCCGTGA |