© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|4287 |
| Gene name | |
| Location | Contig_289:6897..9042 |
| Strand | + |
| Gene length (bp) | 2145 |
| Transcript length (bp) | 2016 |
| Coding sequence length (bp) | 2016 |
| Protein length (aa) | 672 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00571 | CBS | CBS domain | 5.2E-07 | 100 | 144 |
| PF00571 | CBS | CBS domain | 6.8E-09 | 157 | 202 |
| PF00571 | CBS | CBS domain | 5.1E-05 | 267 | 311 |
| PF00571 | CBS | CBS domain | 1.9E-04 | 327 | 371 |
| PF00564 | PB1 | PB1 domain | 1.9E-08 | 488 | 571 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O13965|MUG70_SCHPO | Meiotically up-regulated gene 70 protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mug70 PE=1 SV=1 | 35 | 382 | 2.0E-76 |
| sp|Q9LF97|Y3295_ARATH | CBS domain-containing protein CBSCBSPB3 OS=Arabidopsis thaliana GN=CBSCBSPB3 PE=1 SV=1 | 89 | 558 | 2.0E-68 |
| sp|Q9SJQ5|Y2650_ARATH | CBS domain-containing protein CBSCBSPB2 OS=Arabidopsis thaliana GN=CBSCBSPB2 PE=2 SV=1 | 89 | 558 | 2.0E-63 |
| sp|P0DH79|Y5064_ARATH | CBS domain-containing protein CBSCBSPB5 OS=Arabidopsis thaliana GN=CBSCBSPB5 PE=1 SV=1 | 89 | 558 | 2.0E-56 |
| sp|Q0WLC7|Y5053_ARATH | CBS domain-containing protein CBSCBSPB4 OS=Arabidopsis thaliana GN=CBSCBSPB4 PE=1 SV=2 | 89 | 558 | 2.0E-56 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O13965|MUG70_SCHPO | Meiotically up-regulated gene 70 protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mug70 PE=1 SV=1 | 35 | 382 | 2.0E-76 |
| sp|Q9LF97|Y3295_ARATH | CBS domain-containing protein CBSCBSPB3 OS=Arabidopsis thaliana GN=CBSCBSPB3 PE=1 SV=1 | 89 | 558 | 2.0E-68 |
| sp|Q9SJQ5|Y2650_ARATH | CBS domain-containing protein CBSCBSPB2 OS=Arabidopsis thaliana GN=CBSCBSPB2 PE=2 SV=1 | 89 | 558 | 2.0E-63 |
| sp|P0DH79|Y5064_ARATH | CBS domain-containing protein CBSCBSPB5 OS=Arabidopsis thaliana GN=CBSCBSPB5 PE=1 SV=1 | 89 | 558 | 2.0E-56 |
| sp|Q0WLC7|Y5053_ARATH | CBS domain-containing protein CBSCBSPB4 OS=Arabidopsis thaliana GN=CBSCBSPB4 PE=1 SV=2 | 89 | 558 | 2.0E-56 |
| sp|Q9FMV3|Y5349_ARATH | CBS domain-containing protein CBSCBSPB1 OS=Arabidopsis thaliana GN=CBSCBSPB1 PE=1 SV=1 | 89 | 365 | 3.0E-48 |
| sp|P32987|YBP3_ACIAM | Uncharacterized 17.7 kDa protein in bps2 3'region OS=Acidianus ambivalens PE=3 SV=1 | 101 | 203 | 5.0E-11 |
| sp|P50100|Y525_METKA | Uncharacterized protein MK0525 OS=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=MK0525 PE=3 SV=2 | 103 | 203 | 2.0E-08 |
| sp|O13965|MUG70_SCHPO | Meiotically up-regulated gene 70 protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mug70 PE=1 SV=1 | 430 | 560 | 7.0E-07 |
| sp|Q9C5D0|CBSX2_ARATH | CBS domain-containing protein CBSX2, chloroplastic OS=Arabidopsis thaliana GN=CBSX2 PE=1 SV=1 | 101 | 201 | 5.0E-06 |
| sp|Q8Z4C7|GUTQ_SALTI | Arabinose 5-phosphate isomerase GutQ OS=Salmonella typhi GN=gutQ PE=3 SV=1 | 100 | 210 | 1.0E-05 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005515 | protein binding | Yes |
| GO:0003674 | molecular_function | No |
| GO:0005488 | binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 65 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 647 | 666 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|4287 MSGNTLRHTPTRNQGRAGIPFTNSPAAGSAIPRPILETQPSEASSSVSASRQKQSKRDEAIRRKLENDLSKKKHL TNRARHTRKAPPGTVLALKPSPALQIKPATTVSEAAQLMAAKREDCVLVTDDDERIAGIFTAKDLAFRVVGTGQK AANVTIADIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVLDITKCFYDAMEKLERAYSSSRKLY DALEGVHSELGATQPQQIIQYVEALRSKMSGPTLESVLNGVPPTTVSVRTSVKDAAALMKENHTTALLVQDQGSI TGIFTSKDVVLRVIAPGLDPATCSVVRVMTPHPDFAPMDMTIQAALRKMHDGHYLNLPVMNAEGEIVGMVDVLKL TYATLEQINTMSSGDAEGPAWNKFWLSIDQETESMVSGDGSQSHHPTHMSSRAMSPDVTRDRLGDSVAPGDSASH VGEDSPRSMMADPPEPVNPVDVAFPFKFKAPSGRVHRLQVIACQGMDMLVAAVAAKLGSEADSIGGLPLVKDGKM SGSGFALSYLDDEGDTVSITTDADLVEAIGLARHRRREKVDLFVHDPEKAPVTLPPPVETPVISTPPTSSASNLR ERHKVSEDEDDEGDDETTSTSTIRRSRRARTAPVQEQVIAGVPNELLLPGAIVTLAVVIVGVFAIARATSR* |
| Coding | >OphauB2|4287 ATGTCGGGCAATACGCTAAGGCACACACCCACTCGCAATCAGGGGCGGGCAGGTATCCCCTTCACCAACAGTCCT GCGGCTGGTTCGGCCATTCCGCGTCCGATTCTGGAAACGCAGCCCAGCGAGGCTAGTTCTTCTGTCAGCGCAAGC AGGCAGAAGCAGTCGAAGCGCGACGAAGCCATTCGGAGAAAGCTGGAAAATGACTTGTCCAAGAAGAAGCATCTC ACGAACCGTGCACGTCACACCCGCAAGGCCCCTCCGGGCACTGTTCTCGCCCTCAAGCCGAGTCCCGCCTTGCAG ATTAAGCCTGCCACGACTGTGTCCGAGGCGGCGCAACTCATGGCGGCCAAGCGTGAGGACTGTGTTCTTGTTACC GACGATGACGAGAGAATCGCTGGAATTTTTACTGCCAAGGATCTTGCCTTTCGCGTCGTAGGCACCGGCCAAAAA GCTGCCAACGTGACGATTGCCGATATCATGACCAAGAACCCACTGTGTGCTCGCACTGATACCAGTGCGACCGAT GCTCTCGATTTAATGGTACGCAAGGGCTTCCGGCATCTTCCTGTCATGGATGAGAACCAGGATATATCGGGCGTT CTCGACATCACGAAATGCTTCTATGACGCCATGGAAAAGCTGGAGCGTGCCTACTCATCATCAAGGAAGCTCTAT GATGCCCTCGAAGGTGTTCATTCAGAGCTGGGAGCTACTCAGCCGCAACAAATTATTCAATACGTCGAGGCTCTC CGCAGCAAAATGTCGGGGCCGACGCTGGAATCAGTGCTCAATGGCGTCCCACCCACCACGGTCAGCGTGCGGACA TCTGTCAAGGATGCTGCTGCATTGATGAAGGAGAATCATACCACTGCTCTTCTCGTCCAAGACCAAGGATCCATT ACCGGCATCTTTACGAGCAAAGACGTTGTTCTAAGGGTTATTGCCCCCGGTCTGGATCCTGCCACTTGCAGTGTG GTACGCGTCATGACGCCTCACCCGGACTTTGCGCCTATGGATATGACTATCCAGGCGGCTCTGCGCAAAATGCAT GACGGCCACTATTTGAACCTACCAGTCATGAATGCCGAGGGCGAAATCGTGGGAATGGTTGATGTGCTCAAACTC ACCTACGCGACTCTGGAGCAAATCAACACCATGTCGAGTGGCGATGCCGAGGGCCCAGCGTGGAACAAATTTTGG CTGTCAATCGACCAGGAAACTGAATCCATGGTTTCGGGAGATGGAAGTCAAAGCCACCATCCCACCCACATGAGC TCTCGCGCCATGTCCCCCGATGTCACCCGGGATCGTCTGGGAGATAGTGTTGCTCCTGGCGATTCGGCTTCGCAT GTGGGAGAAGACTCTCCACGATCCATGATGGCTGACCCCCCGGAGCCCGTCAACCCTGTGGACGTAGCCTTTCCC TTCAAATTCAAAGCACCTTCTGGGCGTGTCCACCGCTTACAGGTTATTGCCTGCCAGGGCATGGACATGCTTGTG GCTGCCGTTGCGGCTAAACTCGGAAGTGAGGCTGATTCCATTGGCGGTTTACCACTTGTTAAAGACGGCAAGATG AGCGGATCAGGTTTCGCCCTCAGCTACCTAGACGATGAGGGCGACACAGTATCGATTACCACGGATGCTGATCTT GTCGAGGCCATTGGACTTGCCCGCCACCGGCGCCGCGAAAAGGTTGACTTGTTTGTACATGATCCGGAGAAGGCT CCTGTAACCCTTCCCCCGCCGGTTGAGACGCCCGTCATTTCGACGCCACCCACGTCGTCGGCATCGAATCTTCGC GAGCGCCACAAAGTGTCGGAAGACGAAGATGACGAGGGCGATGATGAAACGACGTCGACATCGACGATTCGACGA TCACGGAGAGCACGAACCGCTCCTGTACAGGAACAAGTTATTGCCGGCGTGCCTAACGAGTTGTTGCTACCTGGA GCTATTGTAACGTTGGCTGTAGTAATTGTGGGAGTTTTCGCTATAGCGAGAGCAACTAGCCGATAG |
| Transcript | >OphauB2|4287 ATGTCGGGCAATACGCTAAGGCACACACCCACTCGCAATCAGGGGCGGGCAGGTATCCCCTTCACCAACAGTCCT GCGGCTGGTTCGGCCATTCCGCGTCCGATTCTGGAAACGCAGCCCAGCGAGGCTAGTTCTTCTGTCAGCGCAAGC AGGCAGAAGCAGTCGAAGCGCGACGAAGCCATTCGGAGAAAGCTGGAAAATGACTTGTCCAAGAAGAAGCATCTC ACGAACCGTGCACGTCACACCCGCAAGGCCCCTCCGGGCACTGTTCTCGCCCTCAAGCCGAGTCCCGCCTTGCAG ATTAAGCCTGCCACGACTGTGTCCGAGGCGGCGCAACTCATGGCGGCCAAGCGTGAGGACTGTGTTCTTGTTACC GACGATGACGAGAGAATCGCTGGAATTTTTACTGCCAAGGATCTTGCCTTTCGCGTCGTAGGCACCGGCCAAAAA GCTGCCAACGTGACGATTGCCGATATCATGACCAAGAACCCACTGTGTGCTCGCACTGATACCAGTGCGACCGAT GCTCTCGATTTAATGGTACGCAAGGGCTTCCGGCATCTTCCTGTCATGGATGAGAACCAGGATATATCGGGCGTT CTCGACATCACGAAATGCTTCTATGACGCCATGGAAAAGCTGGAGCGTGCCTACTCATCATCAAGGAAGCTCTAT GATGCCCTCGAAGGTGTTCATTCAGAGCTGGGAGCTACTCAGCCGCAACAAATTATTCAATACGTCGAGGCTCTC CGCAGCAAAATGTCGGGGCCGACGCTGGAATCAGTGCTCAATGGCGTCCCACCCACCACGGTCAGCGTGCGGACA TCTGTCAAGGATGCTGCTGCATTGATGAAGGAGAATCATACCACTGCTCTTCTCGTCCAAGACCAAGGATCCATT ACCGGCATCTTTACGAGCAAAGACGTTGTTCTAAGGGTTATTGCCCCCGGTCTGGATCCTGCCACTTGCAGTGTG GTACGCGTCATGACGCCTCACCCGGACTTTGCGCCTATGGATATGACTATCCAGGCGGCTCTGCGCAAAATGCAT GACGGCCACTATTTGAACCTACCAGTCATGAATGCCGAGGGCGAAATCGTGGGAATGGTTGATGTGCTCAAACTC ACCTACGCGACTCTGGAGCAAATCAACACCATGTCGAGTGGCGATGCCGAGGGCCCAGCGTGGAACAAATTTTGG CTGTCAATCGACCAGGAAACTGAATCCATGGTTTCGGGAGATGGAAGTCAAAGCCACCATCCCACCCACATGAGC TCTCGCGCCATGTCCCCCGATGTCACCCGGGATCGTCTGGGAGATAGTGTTGCTCCTGGCGATTCGGCTTCGCAT GTGGGAGAAGACTCTCCACGATCCATGATGGCTGACCCCCCGGAGCCCGTCAACCCTGTGGACGTAGCCTTTCCC TTCAAATTCAAAGCACCTTCTGGGCGTGTCCACCGCTTACAGGTTATTGCCTGCCAGGGCATGGACATGCTTGTG GCTGCCGTTGCGGCTAAACTCGGAAGTGAGGCTGATTCCATTGGCGGTTTACCACTTGTTAAAGACGGCAAGATG AGCGGATCAGGTTTCGCCCTCAGCTACCTAGACGATGAGGGCGACACAGTATCGATTACCACGGATGCTGATCTT GTCGAGGCCATTGGACTTGCCCGCCACCGGCGCCGCGAAAAGGTTGACTTGTTTGTACATGATCCGGAGAAGGCT CCTGTAACCCTTCCCCCGCCGGTTGAGACGCCCGTCATTTCGACGCCACCCACGTCGTCGGCATCGAATCTTCGC GAGCGCCACAAAGTGTCGGAAGACGAAGATGACGAGGGCGATGATGAAACGACGTCGACATCGACGATTCGACGA TCACGGAGAGCACGAACCGCTCCTGTACAGGAACAAGTTATTGCCGGCGTGCCTAACGAGTTGTTGCTACCTGGA GCTATTGTAACGTTGGCTGTAGTAATTGTGGGAGTTTTCGCTATAGCGAGAGCAACTAGCCGATAG |
| Gene | >OphauB2|4287 ATGTCGGGCAATACGCTAAGGCACACACCCACTCGCAATCAGGGGCGGGCAGGTATCCCCTTCACCAACAGTCCT GCGGCTGGTTCGGCCATTCCGCGTCCGATTCTGGAAACGCAGCCCAGCGAGGCTAGTTCTTCTGTCAGCGCAAGC AGGCAGAAGCAGTCGAAGCGCGACGAAGTACCAAGACGCCAAGACGCCATACTACTATTAGGATACAGACAAGCT GACTGCCTGTGGTAGGCCATTCGGAGAAAGCTGGAAAATGACTTGTCCAAGAAGAAGCATCTCACGAACCGTGCA CGTCACACCCGCAAGGCCCCTCCGGGCACTGTTCTCGCCCTCAAGCCGAGTCCCGCCTTGCAGATTAAGCCTGCC ACGACTGTGTCCGAGGCGGCGCAACTCATGGCGGCCAAGCGTGAGGACTGTGTTCTTGTTACCGACGATGACGAG AGAATCGCTGGAATTTTTACTGCCAAGGATCTTGCCTTTCGCGTCGTAGGCACCGGCCAAAAAGCTGCCAACGTG ACGATTGCCGATATCATGACCAAGAACCCACTGTGTGCTCGCACTGATACCAGTGCGACCGATGCTCTCGATTTA ATGGTACGCAAGGGCTTCCGGCATCTTCCTGTCATGGATGAGAACCAGGATATATCGGGCGTTCTCGACATCACG AAATGCTTCTATGACGCCATGGAAAAGCTGGAGCGTGCCTACTCATCATCAAGGAAGCTCTATGATGCCCTCGAA GGTGTTCATTCAGAGCTGGGAGCTACTCAGCCGCAACAAATTATTCAATACGTCGAGGCTCTCCGCAGCAAAATG TCGGGGCCGACGCTGGAATCAGTGCTCAATGGCGTCCCACCCACCACGGTCAGCGTGCGGACATCTGTCAAGGAT GCTGCTGCATTGATGAAGGAGAATCATACCACTGCTCTTCTCGTCCAAGACCAAGGATCCATTACCGGCATCTTT ACGAGCAAAGACGTTGTTCTAAGGGTTATTGCCCCCGGTCTGGATCCTGCCACTTGCAGTGTGGTACGCGTCATG ACGCCTCACCCGGACTTTGCGCCTATGGATATGACTATCCAGGCGGCTCTGCGCAAAATGCATGGTTAGTATCCA TTGTATATGAGCTAATAGTGACTGTTACGTCATTTGTCTAACTGTCTTGATACAGACGGCCACTATTTGAACCTA CCAGTCATGAATGCCGAGGGCGAAATCGTGGGAATGGTTGATGTGCTCAAACTCACCTACGCGACTCTGGAGCAA ATCAACACCATGTCGAGTGGCGATGCCGAGGGCCCAGCGTGGAACAAATTTTGGCTGTCAATCGACCAGGAAACT GAATCCATGGTTTCGGGAGATGGAAGTCAAAGCCACCATCCCACCCACATGAGCTCTCGCGCCATGTCCCCCGAT GTCACCCGGGATCGTCTGGGAGATAGTGTTGCTCCTGGCGATTCGGCTTCGCATGTGGGAGAAGACTCTCCACGA TCCATGATGGCTGACCCCCCGGAGCCCGTCAACCCTGTGGACGTAGCCTTTCCCTTCAAATTCAAAGCACCTTCT GGGCGTGTCCACCGCTTACAGGTTATTGCCTGCCAGGGCATGGACATGCTTGTGGCTGCCGTTGCGGCTAAACTC GGAAGTGAGGCTGATTCCATTGGCGGTTTACCACTTGTTAAAGACGGCAAGATGAGCGGATCAGGTTTCGCCCTC AGCTACCTAGACGATGAGGGCGACACAGTATCGATTACCACGGATGCTGATCTTGTCGAGGCCATTGGACTTGCC CGCCACCGGCGCCGCGAAAAGGTTGACTTGTTTGTACATGATCCGGAGAAGGCTCCTGTAACCCTTCCCCCGCCG GTTGAGACGCCCGTCATTTCGACGCCACCCACGTCGTCGGCATCGAATCTTCGCGAGCGCCACAAAGTGTCGGAA GACGAAGATGACGAGGGCGATGATGAAACGACGTCGACATCGACGATTCGACGATCACGGAGAGCACGAACCGCT CCTGTACAGGAACAAGTTATTGCCGGCGTGCCTAACGAGTTGTTGCTACCTGGAGCTATTGTAACGTTGGCTGTA GTAATTGTGGGAGTTTTCGCTATAGCGAGAGCAACTAGCCGATAG |