Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|4257
Gene name
LocationContig_280:10846..11261
Strand-
Gene length (bp)415
Transcript length (bp)213
Coding sequence length (bp)213
Protein length (aa) 71

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02238 COX7a Cytochrome c oxidase subunit VII 5.0E-19 8 62

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 43 0.5

Transmembrane Domains

Domain # Start End Length
1 36 58 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|4257
MGIINAKNKVPEHQRFYQQAYKAHTRIWMINPRSRWYITPYLLLVWGGFGAALYAGGRKVMGHNTWFRDN*
Coding >OphauB2|4257
ATGGGTATTATAAACGCAAAGAATAAGGTGCCCGAGCATCAGCGCTTCTACCAACAAGCATACAAGGCACACACT
CGCATCTGGATGATTAATCCACGAAGCCGCTGGTACATAACGCCATATCTACTATTGGTCTGGGGCGGATTCGGA
GCTGCCTTGTACGCCGGTGGGCGAAAAGTTATGGGTCACAATACCTGGTTCAGGGACAATTGA
Transcript >OphauB2|4257
ATGGGTATTATAAACGCAAAGAATAAGGTGCCCGAGCATCAGCGCTTCTACCAACAAGCATACAAGGCACACACT
CGCATCTGGATGATTAATCCACGAAGCCGCTGGTACATAACGCCATATCTACTATTGGTCTGGGGCGGATTCGGA
GCTGCCTTGTACGCCGGTGGGCGAAAAGTTATGGGTCACAATACCTGGTTCAGGGACAATTGA
Gene >OphauB2|4257
ATGGGGTACGCACTGCAATTTTGAGCTGTCAGACAAAGGCTTTTTTAATATCGCATTCGGCGCTAATGTAACTAT
GACATCCAGTATTATAAACGCAAAGAATAAGGTGCCCGAGCATCAGCGCTTCTACCAACAAGCATACAAGGCACA
CACTCGCATCTGGATGATTGTATGGTCTTCCACCATCCTGGTGATTCTTATAAGCGTGCAGTACTTGGCTCACAT
GCTTGCAGAATCCACGAAGCCGCTGGTACATAACGCCATATCTACTATTGGTCTGGGGCGGATTCGGAGGTAAGC
CTTAGGACTTGTAGTGTTTTGTTTACGCCCTGACTGATTTCCAACTCTTTCAGCTGCCTTGTACGCCGGTGGGCG
AAAAGTTATGGGTCACAATACCTGGTTCAGGGACAATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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