© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|4252 |
| Gene name | |
| Location | Contig_280:851..2132 |
| Strand | - |
| Gene length (bp) | 1281 |
| Transcript length (bp) | 1281 |
| Coding sequence length (bp) | 1281 |
| Protein length (aa) | 427 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01545 | Cation_efflux | Cation efflux family | 8.7E-15 | 142 | 330 |
| PF16916 | ZT_dimer | Dimerisation domain of Zinc Transporter | 1.2E-08 | 349 | 411 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q6Z7K5|MTP3_ORYSJ | Metal tolerance protein 3 OS=Oryza sativa subsp. japonica GN=MTP3 PE=2 SV=1 | 100 | 420 | 6.0E-53 |
| sp|Q9SAJ7|MTP9_ARATH | Metal tolerance protein 9 OS=Arabidopsis thaliana GN=MTP9 PE=2 SV=2 | 95 | 423 | 5.0E-48 |
| sp|Q10PP8|MTP4_ORYSJ | Metal tolerance protein 4 OS=Oryza sativa subsp. japonica GN=MTP4 PE=2 SV=1 | 92 | 420 | 9.0E-48 |
| sp|Q0WU02|MTP10_ARATH | Metal tolerance protein 10 OS=Arabidopsis thaliana GN=MTP10 PE=2 SV=1 | 95 | 420 | 7.0E-47 |
| sp|Q5NA18|MTP5_ORYSJ | Metal tolerance protein 5 OS=Oryza sativa subsp. japonica GN=MTP5 PE=2 SV=1 | 137 | 421 | 1.0E-46 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q6Z7K5|MTP3_ORYSJ | Metal tolerance protein 3 OS=Oryza sativa subsp. japonica GN=MTP3 PE=2 SV=1 | 100 | 420 | 6.0E-53 |
| sp|Q9SAJ7|MTP9_ARATH | Metal tolerance protein 9 OS=Arabidopsis thaliana GN=MTP9 PE=2 SV=2 | 95 | 423 | 5.0E-48 |
| sp|Q10PP8|MTP4_ORYSJ | Metal tolerance protein 4 OS=Oryza sativa subsp. japonica GN=MTP4 PE=2 SV=1 | 92 | 420 | 9.0E-48 |
| sp|Q0WU02|MTP10_ARATH | Metal tolerance protein 10 OS=Arabidopsis thaliana GN=MTP10 PE=2 SV=1 | 95 | 420 | 7.0E-47 |
| sp|Q5NA18|MTP5_ORYSJ | Metal tolerance protein 5 OS=Oryza sativa subsp. japonica GN=MTP5 PE=2 SV=1 | 137 | 421 | 1.0E-46 |
| sp|Q9M2P2|MTPC3_ARATH | Putative metal tolerance protein C3 OS=Arabidopsis thaliana GN=MTPC3 PE=3 SV=2 | 145 | 421 | 2.0E-45 |
| sp|Q9LDU0|MTP7_ORYSJ | Metal tolerance protein 7 OS=Oryza sativa subsp. japonica GN=MTP7 PE=2 SV=1 | 84 | 420 | 9.0E-44 |
| sp|O80632|MTP11_ARATH | Metal tolerance protein 11 OS=Arabidopsis thaliana GN=MTP11 PE=2 SV=1 | 124 | 421 | 3.0E-36 |
| sp|Q0DHJ5|MTP6_ORYSJ | Metal tolerance protein 6 OS=Oryza sativa subsp. japonica GN=MTP6 PE=2 SV=2 | 137 | 425 | 3.0E-32 |
| sp|Q57891|Y449_METJA | Uncharacterized transporter MJ0449 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0449 PE=3 SV=1 | 142 | 411 | 5.0E-09 |
| sp|Q8L725|MTPC1_ARATH | Metal tolerance protein C1 OS=Arabidopsis thaliana GN=MTPC1 PE=2 SV=1 | 143 | 411 | 2.0E-07 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0008324 | cation transmembrane transporter activity | Yes |
| GO:0006812 | cation transport | Yes |
| GO:0008150 | biological_process | No |
| GO:0006811 | ion transport | No |
| GO:0006810 | transport | No |
| GO:0005575 | cellular_component | No |
| GO:0051234 | establishment of localization | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0015075 | ion transmembrane transporter activity | No |
| GO:0005215 | transporter activity | No |
| GO:0051179 | localization | No |
| GO:0003674 | molecular_function | No |
| GO:0009987 | cellular process | No |
| GO:0022857 | transmembrane transporter activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 70 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 137 | 159 | 22 |
| 2 | 163 | 185 | 22 |
| 3 | 206 | 228 | 22 |
| 4 | 243 | 265 | 22 |
| 5 | 284 | 303 | 19 |
| 6 | 313 | 335 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|4252 MFLLRSTDSHEQGTKTPSRQGTSSIAMEPLDMTRRIASLATSDIERQTALRLSGHENDPYRLWQAYKTPLDLDEI KATSCRKRASHGAPGIKGIKARRLRGFYENQNAAIDRMLKSVDEHRAEARQEHGNDELRVRVALYGSLVANLGLA VLQLYAAISSGSLSLFTTMADAIFDPLSTLALILSARAIRHVDPRRFPAGKARLETVGNIVFCFLMAAVSLIILA FAAQELSQHGMEKQFHLASVLSVCAAFAAKLALFGYCWSLKSRYSQIRVLWQDHRNDLLVNGFGILTAVGGAKLM WWVDAAGAVALSLLTAVVWLRTAFAEFLLLVGVVASVDMQQLITYLCLTHSTAIEGIDTVRVYHSGPRLIAEVDV VMDPMRTLFDTHDVAEQLQMKLESLPNIERAYVHIDYETTHKPEHAYKKDI* |
| Coding | >OphauB2|4252 ATGTTTCTACTCAGATCGACAGACAGCCACGAGCAGGGCACAAAGACCCCTTCGCGCCAAGGCACAAGCAGCATA GCCATGGAGCCCTTGGATATGACTAGACGAATTGCATCATTGGCCACTAGCGATATCGAGAGGCAAACTGCATTG CGGCTCAGTGGCCACGAAAATGACCCTTATCGACTATGGCAGGCATACAAGACGCCTTTGGACCTGGATGAGATC AAGGCTACCTCGTGTCGCAAGCGTGCCAGTCATGGAGCACCAGGAATCAAGGGAATCAAGGCGCGCAGGCTCCGC GGCTTCTACGAGAATCAAAATGCCGCCATTGATCGAATGCTCAAATCGGTTGATGAGCACCGGGCCGAGGCGCGT CAAGAGCATGGTAATGACGAGCTGCGAGTGCGCGTGGCCCTGTACGGCTCCTTGGTGGCCAATCTTGGGCTGGCA GTGTTGCAGCTCTATGCAGCCATATCTTCGGGCTCTCTGTCCCTCTTTACCACCATGGCCGACGCCATCTTTGAT CCACTAAGCACCTTGGCCCTTATCCTATCGGCTCGTGCCATTCGACACGTGGATCCGCGACGCTTCCCGGCGGGC AAGGCGCGACTCGAAACGGTGGGAAACATTGTATTCTGCTTCCTCATGGCGGCTGTGTCGCTCATCATCTTGGCC TTTGCTGCGCAGGAGCTCTCCCAGCACGGCATGGAAAAGCAATTCCATTTAGCGTCCGTCTTGTCAGTATGTGCC GCCTTTGCCGCCAAGCTGGCTCTCTTTGGCTACTGTTGGTCTCTCAAAAGCAGGTACAGTCAGATTCGCGTCTTG TGGCAAGACCATCGCAACGATCTCTTGGTCAACGGCTTTGGCATCCTGACGGCAGTGGGGGGCGCCAAGCTGATG TGGTGGGTGGATGCAGCAGGGGCCGTGGCACTATCGCTCTTGACGGCCGTCGTCTGGCTGCGCACCGCCTTTGCT GAGTTTTTGCTGCTGGTGGGTGTGGTTGCGTCGGTCGACATGCAGCAGCTCATCACCTATCTGTGCCTGACGCAT TCAACCGCCATTGAGGGTATTGACACTGTGCGAGTCTACCACTCGGGCCCCAGGTTGATTGCTGAGGTGGATGTG GTCATGGACCCCATGCGCACCTTGTTCGACACTCACGATGTGGCCGAGCAACTCCAGATGAAGCTTGAAAGCCTT CCCAACATTGAGCGCGCCTACGTTCACATTGACTACGAGACGACGCACAAGCCCGAGCATGCCTATAAGAAGGAC ATTTAG |
| Transcript | >OphauB2|4252 ATGTTTCTACTCAGATCGACAGACAGCCACGAGCAGGGCACAAAGACCCCTTCGCGCCAAGGCACAAGCAGCATA GCCATGGAGCCCTTGGATATGACTAGACGAATTGCATCATTGGCCACTAGCGATATCGAGAGGCAAACTGCATTG CGGCTCAGTGGCCACGAAAATGACCCTTATCGACTATGGCAGGCATACAAGACGCCTTTGGACCTGGATGAGATC AAGGCTACCTCGTGTCGCAAGCGTGCCAGTCATGGAGCACCAGGAATCAAGGGAATCAAGGCGCGCAGGCTCCGC GGCTTCTACGAGAATCAAAATGCCGCCATTGATCGAATGCTCAAATCGGTTGATGAGCACCGGGCCGAGGCGCGT CAAGAGCATGGTAATGACGAGCTGCGAGTGCGCGTGGCCCTGTACGGCTCCTTGGTGGCCAATCTTGGGCTGGCA GTGTTGCAGCTCTATGCAGCCATATCTTCGGGCTCTCTGTCCCTCTTTACCACCATGGCCGACGCCATCTTTGAT CCACTAAGCACCTTGGCCCTTATCCTATCGGCTCGTGCCATTCGACACGTGGATCCGCGACGCTTCCCGGCGGGC AAGGCGCGACTCGAAACGGTGGGAAACATTGTATTCTGCTTCCTCATGGCGGCTGTGTCGCTCATCATCTTGGCC TTTGCTGCGCAGGAGCTCTCCCAGCACGGCATGGAAAAGCAATTCCATTTAGCGTCCGTCTTGTCAGTATGTGCC GCCTTTGCCGCCAAGCTGGCTCTCTTTGGCTACTGTTGGTCTCTCAAAAGCAGGTACAGTCAGATTCGCGTCTTG TGGCAAGACCATCGCAACGATCTCTTGGTCAACGGCTTTGGCATCCTGACGGCAGTGGGGGGCGCCAAGCTGATG TGGTGGGTGGATGCAGCAGGGGCCGTGGCACTATCGCTCTTGACGGCCGTCGTCTGGCTGCGCACCGCCTTTGCT GAGTTTTTGCTGCTGGTGGGTGTGGTTGCGTCGGTCGACATGCAGCAGCTCATCACCTATCTGTGCCTGACGCAT TCAACCGCCATTGAGGGTATTGACACTGTGCGAGTCTACCACTCGGGCCCCAGGTTGATTGCTGAGGTGGATGTG GTCATGGACCCCATGCGCACCTTGTTCGACACTCACGATGTGGCCGAGCAACTCCAGATGAAGCTTGAAAGCCTT CCCAACATTGAGCGCGCCTACGTTCACATTGACTACGAGACGACGCACAAGCCCGAGCATGCCTATAAGAAGGAC ATTTAG |
| Gene | >OphauB2|4252 ATGTTTCTACTCAGATCGACAGACAGCCACGAGCAGGGCACAAAGACCCCTTCGCGCCAAGGCACAAGCAGCATA GCCATGGAGCCCTTGGATATGACTAGACGAATTGCATCATTGGCCACTAGCGATATCGAGAGGCAAACTGCATTG CGGCTCAGTGGCCACGAAAATGACCCTTATCGACTATGGCAGGCATACAAGACGCCTTTGGACCTGGATGAGATC AAGGCTACCTCGTGTCGCAAGCGTGCCAGTCATGGAGCACCAGGAATCAAGGGAATCAAGGCGCGCAGGCTCCGC GGCTTCTACGAGAATCAAAATGCCGCCATTGATCGAATGCTCAAATCGGTTGATGAGCACCGGGCCGAGGCGCGT CAAGAGCATGGTAATGACGAGCTGCGAGTGCGCGTGGCCCTGTACGGCTCCTTGGTGGCCAATCTTGGGCTGGCA GTGTTGCAGCTCTATGCAGCCATATCTTCGGGCTCTCTGTCCCTCTTTACCACCATGGCCGACGCCATCTTTGAT CCACTAAGCACCTTGGCCCTTATCCTATCGGCTCGTGCCATTCGACACGTGGATCCGCGACGCTTCCCGGCGGGC AAGGCGCGACTCGAAACGGTGGGAAACATTGTATTCTGCTTCCTCATGGCGGCTGTGTCGCTCATCATCTTGGCC TTTGCTGCGCAGGAGCTCTCCCAGCACGGCATGGAAAAGCAATTCCATTTAGCGTCCGTCTTGTCAGTATGTGCC GCCTTTGCCGCCAAGCTGGCTCTCTTTGGCTACTGTTGGTCTCTCAAAAGCAGGTACAGTCAGATTCGCGTCTTG TGGCAAGACCATCGCAACGATCTCTTGGTCAACGGCTTTGGCATCCTGACGGCAGTGGGGGGCGCCAAGCTGATG TGGTGGGTGGATGCAGCAGGGGCCGTGGCACTATCGCTCTTGACGGCCGTCGTCTGGCTGCGCACCGCCTTTGCT GAGTTTTTGCTGCTGGTGGGTGTGGTTGCGTCGGTCGACATGCAGCAGCTCATCACCTATCTGTGCCTGACGCAT TCAACCGCCATTGAGGGTATTGACACTGTGCGAGTCTACCACTCGGGCCCCAGGTTGATTGCTGAGGTGGATGTG GTCATGGACCCCATGCGCACCTTGTTCGACACTCACGATGTGGCCGAGCAACTCCAGATGAAGCTTGAAAGCCTT CCCAACATTGAGCGCGCCTACGTTCACATTGACTACGAGACGACGCACAAGCCCGAGCATGCCTATAAGAAGGAC ATTTAG |