Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauB2\|4249
Gene name
Location	Contig_28:167483..168467
Strand	-
Gene length (bp)	984
Transcript length (bp)	984
Coding sequence length (bp)	984
Protein length (aa)	328

PFAM Domains

(None)

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P28349\|NIT4_NEUCR	Nitrogen assimilation transcription factor nit-4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=nit-4 PE=3 SV=2	1	177	3.0E-69
sp\|P28348\|NIRA_EMENI	Nitrogen assimilation transcription factor nirA OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=nirA PE=3 SV=1	1	138	2.0E-54

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 24	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauB2\|4249 MFFHLQYIHLFRPFLKYRPSASPLPPHVSPRRICTAHAAAISKLMRLYKRCYNLRQICNIAVYMTHSACTIHLLN LPDKTARRDMIHGVKHLEEIAHDWLCARRTLSILSVLARKWQCSVPDEAAAVLRRTDELYGSYSTSDVPTPRSSA SPQAGLDEALGKSNANSPREYSPMSHYVRGHVAAAAAASASSCFTSRSMLRPGGLDGTTEMDVYAAPTTTEPILP AWTTGDATTTTISANANPLLAPGSLAPAPPPLPLDMHVNGQSWIMQDCARWQQNFEAWDLGAGAGVEGVYCFAQE LKTNEAPEEAALSGPVLNDLQWYAALE*
Coding	>OphauB2\|4249 ATGTTTTTCCACCTGCAATACATTCACCTCTTTCGCCCCTTTCTCAAATACCGTCCCTCGGCCTCGCCTCTGCCG CCGCACGTGTCCCCACGACGCATCTGCACGGCGCACGCGGCCGCCATATCCAAGCTGATGCGGCTGTACAAGCGG TGCTACAATTTGCGGCAAATCTGCAACATTGCCGTCTACATGACGCACAGCGCGTGCACCATTCACCTGCTCAAC CTGCCCGACAAGACGGCACGGCGCGACATGATTCACGGCGTCAAGCACCTGGAAGAGATTGCGCACGACTGGCTG TGTGCGCGGCGCACGCTGAGCATTTTGAGCGTGCTGGCGCGCAAGTGGCAGTGCAGCGTGCCCGACGAGGCGGCG GCGGTGCTGCGGCGCACAGACGAGCTCTATGGCTCGTATAGCACGTCTGACGTGCCGACGCCGCGGTCGAGTGCG TCGCCGCAAGCAGGGCTGGATGAGGCGCTTGGCAAGTCGAATGCGAATTCGCCGCGCGAGTATAGTCCCATGAGT CACTATGTGCGCGGACACGTTGCTGCTGCTGCTGCTGCTTCTGCTTCTTCTTGTTTTACGTCACGGTCTATGCTA CGGCCAGGCGGCCTAGACGGGACTACAGAAATGGACGTGTATGCCGCGCCAACCACGACGGAGCCTATACTACCA GCCTGGACGACGGGCGACGCCACCACCACCACAATAAGTGCGAATGCGAATCCCCTCCTTGCTCCGGGCTCACTG GCACCAGCACCGCCGCCGCTGCCGCTTGACATGCACGTCAATGGCCAGTCTTGGATAATGCAAGACTGTGCGCGG TGGCAGCAAAACTTTGAGGCGTGGGACCTGGGCGCCGGCGCAGGAGTAGAGGGCGTGTATTGCTTTGCACAAGAG CTCAAGACGAATGAAGCGCCAGAAGAAGCAGCATTATCGGGGCCAGTGCTAAATGATTTGCAGTGGTATGCGGCG CTCGAGTAG
Transcript	>OphauB2\|4249 ATGTTTTTCCACCTGCAATACATTCACCTCTTTCGCCCCTTTCTCAAATACCGTCCCTCGGCCTCGCCTCTGCCG CCGCACGTGTCCCCACGACGCATCTGCACGGCGCACGCGGCCGCCATATCCAAGCTGATGCGGCTGTACAAGCGG TGCTACAATTTGCGGCAAATCTGCAACATTGCCGTCTACATGACGCACAGCGCGTGCACCATTCACCTGCTCAAC CTGCCCGACAAGACGGCACGGCGCGACATGATTCACGGCGTCAAGCACCTGGAAGAGATTGCGCACGACTGGCTG TGTGCGCGGCGCACGCTGAGCATTTTGAGCGTGCTGGCGCGCAAGTGGCAGTGCAGCGTGCCCGACGAGGCGGCG GCGGTGCTGCGGCGCACAGACGAGCTCTATGGCTCGTATAGCACGTCTGACGTGCCGACGCCGCGGTCGAGTGCG TCGCCGCAAGCAGGGCTGGATGAGGCGCTTGGCAAGTCGAATGCGAATTCGCCGCGCGAGTATAGTCCCATGAGT CACTATGTGCGCGGACACGTTGCTGCTGCTGCTGCTGCTTCTGCTTCTTCTTGTTTTACGTCACGGTCTATGCTA CGGCCAGGCGGCCTAGACGGGACTACAGAAATGGACGTGTATGCCGCGCCAACCACGACGGAGCCTATACTACCA GCCTGGACGACGGGCGACGCCACCACCACCACAATAAGTGCGAATGCGAATCCCCTCCTTGCTCCGGGCTCACTG GCACCAGCACCGCCGCCGCTGCCGCTTGACATGCACGTCAATGGCCAGTCTTGGATAATGCAAGACTGTGCGCGG TGGCAGCAAAACTTTGAGGCGTGGGACCTGGGCGCCGGCGCAGGAGTAGAGGGCGTGTATTGCTTTGCACAAGAG CTCAAGACGAATGAAGCGCCAGAAGAAGCAGCATTATCGGGGCCAGTGCTAAATGATTTGCAGTGGTATGCGGCG CTCGAGTAG
Gene	>OphauB2\|4249 ATGTTTTTCCACCTGCAATACATTCACCTCTTTCGCCCCTTTCTCAAATACCGTCCCTCGGCCTCGCCTCTGCCG CCGCACGTGTCCCCACGACGCATCTGCACGGCGCACGCGGCCGCCATATCCAAGCTGATGCGGCTGTACAAGCGG TGCTACAATTTGCGGCAAATCTGCAACATTGCCGTCTACATGACGCACAGCGCGTGCACCATTCACCTGCTCAAC CTGCCCGACAAGACGGCACGGCGCGACATGATTCACGGCGTCAAGCACCTGGAAGAGATTGCGCACGACTGGCTG TGTGCGCGGCGCACGCTGAGCATTTTGAGCGTGCTGGCGCGCAAGTGGCAGTGCAGCGTGCCCGACGAGGCGGCG GCGGTGCTGCGGCGCACAGACGAGCTCTATGGCTCGTATAGCACGTCTGACGTGCCGACGCCGCGGTCGAGTGCG TCGCCGCAAGCAGGGCTGGATGAGGCGCTTGGCAAGTCGAATGCGAATTCGCCGCGCGAGTATAGTCCCATGAGT CACTATGTGCGCGGACACGTTGCTGCTGCTGCTGCTGCTTCTGCTTCTTCTTGTTTTACGTCACGGTCTATGCTA CGGCCAGGCGGCCTAGACGGGACTACAGAAATGGACGTGTATGCCGCGCCAACCACGACGGAGCCTATACTACCA GCCTGGACGACGGGCGACGCCACCACCACCACAATAAGTGCGAATGCGAATCCCCTCCTTGCTCCGGGCTCACTG GCACCAGCACCGCCGCCGCTGCCGCTTGACATGCACGTCAATGGCCAGTCTTGGATAATGCAAGACTGTGCGCGG TGGCAGCAAAACTTTGAGGCGTGGGACCTGGGCGCCGGCGCAGGAGTAGAGGGCGTGTATTGCTTTGCACAAGAG CTCAAGACGAATGAAGCGCCAGAAGAAGCAGCATTATCGGGGCCAGTGCTAAATGATTTGCAGTGGTATGCGGCG CTCGAGTAG

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