Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|4146
Gene name
LocationContig_27:166430..166950
Strand-
Gene length (bp)520
Transcript length (bp)414
Coding sequence length (bp)414
Protein length (aa) 138

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05047 L51_S25_CI-B8 Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain 5.1E-15 41 90

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q758S3|RM51_ASHGO 54S ribosomal protein L51, mitochondrial OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=MRPL51 PE=3 SV=1 1 131 2.0E-41
sp|Q06090|RM51_YEAST 54S ribosomal protein L51, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MRPL51 PE=1 SV=1 1 132 2.0E-33
sp|Q9UUC8|RM51_SCHPO 54S ribosomal protein L51, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mrpl51 PE=3 SV=1 1 134 2.0E-33
sp|Q5A3J1|RM51_CANAL 54S ribosomal protein L51, mitochondrial OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=MRPL51 PE=3 SV=1 1 129 1.0E-23
sp|Q99N89|RM43_MOUSE 39S ribosomal protein L43, mitochondrial OS=Mus musculus GN=Mrpl43 PE=1 SV=1 9 135 2.0E-16
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Swissprot ID Swissprot Description Start End E-value
sp|Q758S3|RM51_ASHGO 54S ribosomal protein L51, mitochondrial OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=MRPL51 PE=3 SV=1 1 131 2.0E-41
sp|Q06090|RM51_YEAST 54S ribosomal protein L51, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MRPL51 PE=1 SV=1 1 132 2.0E-33
sp|Q9UUC8|RM51_SCHPO 54S ribosomal protein L51, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mrpl51 PE=3 SV=1 1 134 2.0E-33
sp|Q5A3J1|RM51_CANAL 54S ribosomal protein L51, mitochondrial OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=MRPL51 PE=3 SV=1 1 129 1.0E-23
sp|Q99N89|RM43_MOUSE 39S ribosomal protein L43, mitochondrial OS=Mus musculus GN=Mrpl43 PE=1 SV=1 9 135 2.0E-16
sp|Q95KE5|RM43_BOVIN 39S ribosomal protein L43, mitochondrial OS=Bos taurus GN=MRPL43 PE=2 SV=2 9 133 6.0E-14
sp|Q8N983|RM43_HUMAN 39S ribosomal protein L43, mitochondrial OS=Homo sapiens GN=MRPL43 PE=1 SV=1 10 133 1.0E-12
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GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|4146
MTVRALRAIAVGQNGLGAYILQCKKMDLHYCDWAGSSRGMNGFIKSILPKFAAVNPQIEFVVSPRPGKHPVLTGH
YINGLTKPICVRNLSPYEILQKAELLRDASGEKLRRYNKAVKSINPSVRGIWSPYHGRGLVV*
Coding >OphauB2|4146
ATGACCGTCAGGGCTTTGCGCGCTATTGCGGTCGGCCAGAATGGCCTGGGCGCATATATCCTCCAATGCAAAAAG
ATGGACTTGCACTACTGCGACTGGGCCGGCAGCTCTCGCGGCATGAATGGCTTCATCAAATCCATCTTGCCAAAG
TTCGCCGCCGTCAATCCCCAAATCGAATTCGTCGTGTCCCCCCGTCCCGGCAAACACCCCGTCCTGACCGGCCAC
TACATCAACGGCCTCACAAAACCCATTTGCGTTCGCAACCTGTCGCCCTATGAGATTCTCCAAAAGGCCGAATTG
CTGCGAGACGCAAGTGGCGAGAAGCTCAGGCGCTACAACAAGGCTGTCAAGAGCATCAACCCCAGCGTCAGAGGC
ATTTGGTCTCCCTATCATGGCAGGGGATTGGTGGTGTAG
Transcript >OphauB2|4146
ATGACCGTCAGGGCTTTGCGCGCTATTGCGGTCGGCCAGAATGGCCTGGGCGCATATATCCTCCAATGCAAAAAG
ATGGACTTGCACTACTGCGACTGGGCCGGCAGCTCTCGCGGCATGAATGGCTTCATCAAATCCATCTTGCCAAAG
TTCGCCGCCGTCAATCCCCAAATCGAATTCGTCGTGTCCCCCCGTCCCGGCAAACACCCCGTCCTGACCGGCCAC
TACATCAACGGCCTCACAAAACCCATTTGCGTTCGCAACCTGTCGCCCTATGAGATTCTCCAAAAGGCCGAATTG
CTGCGAGACGCAAGTGGCGAGAAGCTCAGGCGCTACAACAAGGCTGTCAAGAGCATCAACCCCAGCGTCAGAGGC
ATTTGGTCTCCCTATCATGGCAGGGGATTGGTGGTGTAG
Gene >OphauB2|4146
ATGACCGTCAGGGCTTTGCGCGCTATTGCGGTCGGCCAGGTCAGTCAATCGACGCCTTTTCCGGCAAGTTTTCAA
GAGTTCTAATGCAGTGCAGAATGGCCTGGGCGCATATATCCTCCAATGCAAAAAGATGGACTTGCACTACTGCGA
CTGGGCCGGCAGCTCTCGCGGCATGAAGTAGGTCCATCCCGCCTGCAAGAGGCTAGGCAGCGTTGCTAAATACAG
CAGTGGCTTCATCAAATCCATCTTGCCAAAGTTCGCCGCCGTCAATCCCCAAATCGAATTCGTCGTGTCCCCCCG
TCCCGGCAAACACCCCGTCCTGACCGGCCACTACATCAACGGCCTCACAAAACCCATTTGCGTTCGCAACCTGTC
GCCCTATGAGATTCTCCAAAAGGCCGAATTGCTGCGAGACGCAAGTGGCGAGAAGCTCAGGCGCTACAACAAGGC
TGTCAAGAGCATCAACCCCAGCGTCAGAGGCATTTGGTCTCCCTATCATGGCAGGGGATTGGTGGTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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