Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauB2\|4096
Gene name
Location	Contig_27:28507..29704
Strand	+
Gene length (bp)	1197
Transcript length (bp)	987
Coding sequence length (bp)	987
Protein length (aa)	329

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF03981	Ubiq_cyt_C_chap	Ubiquinol-cytochrome C chaperone	3.4E-32	112	250

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9USK6\|CBP3_SCHPO	CBP3-like protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cbp3 PE=3 SV=1	109	250	3.0E-25
sp\|P21560\|CBP3_YEAST	Protein CBP3, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CBP3 PE=1 SV=1	95	250	3.0E-22
sp\|Q9W6I0\|UQCC1_XENLA	Ubiquinol-cytochrome-c reductase complex assembly factor 1 OS=Xenopus laevis GN=uqcc1 PE=2 SV=1	115	233	3.0E-07
sp\|Q9CWU6\|UQCC1_MOUSE	Ubiquinol-cytochrome-c reductase complex assembly factor 1 OS=Mus musculus GN=Uqcc1 PE=1 SV=1	114	243	8.0E-07

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 26	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauB2\|4096 MKTICQGCKTQVCALAPRLARRSAALPLCTGRVGPARQFGSSGPRGLLSFGVKSVADSYRVLGASEALFKACAAP ADYQVPAWKREEDCVEKREDGEELGEAKTHGNVWHRALRLPVSFNTWSHVTMLHLYLINARLRCFGRETYRTWQQ QLTDHFFFEAEKKMHLDHAITSSALRQRYLKDLFVQWRGLLLAYDEGLIAGDAILASALWRNLCKGDATTDPCAL LALVGWIRSGLVEMEAISDAAFPHGVKRILERSIQPFWMKLDGTFQRGPEGDLERGPDGELVLRDDVAGSDVFKR ATLNTGAEEREKRAAALVAAIKAGRKVK*
Coding	>OphauB2\|4096 ATGAAAACCATATGCCAAGGCTGCAAAACGCAAGTCTGCGCCCTCGCACCTAGACTAGCCCGCCGCTCTGCCGCC CTGCCGCTCTGCACAGGGAGGGTGGGCCCGGCGCGGCAGTTTGGTAGTTCGGGGCCGCGGGGGCTGCTGAGTTTC GGGGTCAAGTCGGTGGCTGATTCGTATCGCGTGCTGGGCGCGTCGGAGGCGCTCTTCAAGGCGTGTGCGGCGCCG GCGGATTATCAGGTTCCGGCATGGAAGAGGGAGGAGGACTGTGTGGAGAAGAGGGAGGATGGGGAGGAGTTGGGC GAGGCCAAGACGCATGGCAACGTGTGGCATAGAGCTCTCCGCCTCCCCGTCAGCTTCAACACTTGGTCGCACGTC ACCATGCTGCACCTCTACCTCATCAATGCGCGCCTCCGCTGCTTTGGGCGCGAAACGTACCGCACCTGGCAGCAA CAGCTCACTGACCACTTCTTCTTCGAGGCGGAAAAAAAGATGCACCTCGACCACGCCATTACGTCGAGCGCCCTG CGCCAGCGCTACCTCAAGGACTTGTTTGTCCAGTGGCGCGGCCTGCTGCTCGCCTACGACGAGGGCCTCATTGCC GGCGACGCCATTCTTGCCAGTGCTTTGTGGCGCAATCTGTGCAAGGGCGATGCTACGACGGATCCATGCGCCTTG CTTGCATTGGTGGGCTGGATACGGTCTGGCTTGGTGGAGATGGAGGCCATTTCAGATGCTGCCTTTCCACACGGC GTGAAGCGCATTCTCGAAAGGTCAATACAGCCCTTTTGGATGAAGCTTGACGGTACCTTTCAGCGCGGGCCTGAA GGTGACCTTGAACGCGGGCCTGATGGTGAGTTGGTCCTGCGCGACGACGTGGCTGGCAGCGACGTGTTCAAAAGG GCCACGTTGAATACGGGAGCCGAGGAAAGGGAAAAAAGGGCAGCAGCCTTGGTGGCGGCAATCAAGGCGGGCAGA AAGGTGAAGTAG
Transcript	>OphauB2\|4096 ATGAAAACCATATGCCAAGGCTGCAAAACGCAAGTCTGCGCCCTCGCACCTAGACTAGCCCGCCGCTCTGCCGCC CTGCCGCTCTGCACAGGGAGGGTGGGCCCGGCGCGGCAGTTTGGTAGTTCGGGGCCGCGGGGGCTGCTGAGTTTC GGGGTCAAGTCGGTGGCTGATTCGTATCGCGTGCTGGGCGCGTCGGAGGCGCTCTTCAAGGCGTGTGCGGCGCCG GCGGATTATCAGGTTCCGGCATGGAAGAGGGAGGAGGACTGTGTGGAGAAGAGGGAGGATGGGGAGGAGTTGGGC GAGGCCAAGACGCATGGCAACGTGTGGCATAGAGCTCTCCGCCTCCCCGTCAGCTTCAACACTTGGTCGCACGTC ACCATGCTGCACCTCTACCTCATCAATGCGCGCCTCCGCTGCTTTGGGCGCGAAACGTACCGCACCTGGCAGCAA CAGCTCACTGACCACTTCTTCTTCGAGGCGGAAAAAAAGATGCACCTCGACCACGCCATTACGTCGAGCGCCCTG CGCCAGCGCTACCTCAAGGACTTGTTTGTCCAGTGGCGCGGCCTGCTGCTCGCCTACGACGAGGGCCTCATTGCC GGCGACGCCATTCTTGCCAGTGCTTTGTGGCGCAATCTGTGCAAGGGCGATGCTACGACGGATCCATGCGCCTTG CTTGCATTGGTGGGCTGGATACGGTCTGGCTTGGTGGAGATGGAGGCCATTTCAGATGCTGCCTTTCCACACGGC GTGAAGCGCATTCTCGAAAGGTCAATACAGCCCTTTTGGATGAAGCTTGACGGTACCTTTCAGCGCGGGCCTGAA GGTGACCTTGAACGCGGGCCTGATGGTGAGTTGGTCCTGCGCGACGACGTGGCTGGCAGCGACGTGTTCAAAAGG GCCACGTTGAATACGGGAGCCGAGGAAAGGGAAAAAAGGGCAGCAGCCTTGGTGGCGGCAATCAAGGCGGGCAGA AAGGTGAAGTAG
Gene	>OphauB2\|4096 ATGAAAACCATATGCCAAGGCTGCAAAACGCAAGTCTGCGCCCTCGCACCTAGACTAGCCCGCCGCTCTGCCGCC CTGCCGCTCTGCACAGGGAGGGTGGGCCCGGCGCGGCAGTTTGGTAGTTCGGGGCCGCGGGGGCTGCTGAGTTTC GGGGTCAAGTCGGTGGCTGATTCGTATCGCGTGCTGGGCGCGTCGGAGGCGCTCTTCAAGGCGTGTGCGGCGCCG GCGGATTATCAGGTTCCGGCATGGAAGAGGGAGGAGGACTGTGTGGAGAAGAGGGAGGATGGGGAGGAGTTGGGC GAGGCCAAGACGCATGGCAACGTGTGGCATAGAGGTTGTCTTTTTTTTTTTTTTCCTTTTTTTCCTTTTTTTTTA AATCCCTTCATCTACAAGGCAGAGTCGAGTCGAGATTCTTCTACAAGACAGAGTCGAGTCGAGATTCTTCTTCGG CTTCTACAAGACAGAGTCGAGCCGACAAAATGGCAGCCTGCAGAAAAAAAAAAAAAAGAGAGAAAAAACAACTTT GCTAACGCTCCTGACCCAGCTCTCCGCCTCCCCGTCAGCTTCAACACTTGGTCGCACGTCACCATGCTGCACCTC TACCTCATCAATGCGCGCCTCCGCTGCTTTGGGCGCGAAACGTACCGCACCTGGCAGCAACAGCTCACTGACCAC TTCTTCTTCGAGGCGGAAAAAAAGATGCACCTCGACCACGCCATTACGTCGAGCGCCCTGCGCCAGCGCTACCTC AAGGACTTGTTTGTCCAGTGGCGCGGCCTGCTGCTCGCCTACGACGAGGGCCTCATTGCCGGCGACGCCATTCTT GCCAGTGCTTTGTGGCGCAATCTGTGCAAGGGCGATGCTACGACGGATCCATGCGCCTTGCTTGCATTGGTGGGC TGGATACGGTCTGGCTTGGTGGAGATGGAGGCCATTTCAGATGCTGCCTTTCCACACGGCGTGAAGCGCATTCTC GAAAGGTCAATACAGCCCTTTTGGATGAAGCTTGACGGTACCTTTCAGCGCGGGCCTGAAGGTGACCTTGAACGC GGGCCTGATGGTGAGTTGGTCCTGCGCGACGACGTGGCTGGCAGCGACGTGTTCAAAAGGGCCACGTTGAATACG GGAGCCGAGGAAAGGGAAAAAAGGGCAGCAGCCTTGGTGGCGGCAATCAAGGCGGGCAGAAAGGTGAAGTAG

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