Protein ID | OphauB2|4096 |
Gene name | |
Location | Contig_27:28507..29704 |
Strand | + |
Gene length (bp) | 1197 |
Transcript length (bp) | 987 |
Coding sequence length (bp) | 987 |
Protein length (aa) | 329 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF03981 | Ubiq_cyt_C_chap | Ubiquinol-cytochrome C chaperone | 3.4E-32 | 112 | 250 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q9USK6|CBP3_SCHPO | CBP3-like protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cbp3 PE=3 SV=1 | 109 | 250 | 3.0E-25 |
sp|P21560|CBP3_YEAST | Protein CBP3, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CBP3 PE=1 SV=1 | 95 | 250 | 3.0E-22 |
sp|Q9W6I0|UQCC1_XENLA | Ubiquinol-cytochrome-c reductase complex assembly factor 1 OS=Xenopus laevis GN=uqcc1 PE=2 SV=1 | 115 | 233 | 3.0E-07 |
sp|Q9CWU6|UQCC1_MOUSE | Ubiquinol-cytochrome-c reductase complex assembly factor 1 OS=Mus musculus GN=Uqcc1 PE=1 SV=1 | 114 | 243 | 8.0E-07 |
Gene cluster ID | Type of secondary metabolism gene |
---|---|
Cluster 19 | (None) |
Orthofinder run ID | 4 |
Orthogroup | 4913 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauB2|4096 MKTICQGCKTQVCALAPRLARRSAALPLCTGRVGPARQFGSSGPRGLLSFGVKSVADSYRVLGASEALFKACAAP ADYQVPAWKREEDCVEKREDGEELGEAKTHGNVWHRALRLPVSFNTWSHVTMLHLYLINARLRCFGRETYRTWQQ QLTDHFFFEAEKKMHLDHAITSSALRQRYLKDLFVQWRGLLLAYDEGLIAGDAILASALWRNLCKGDATTDPCAL LALVGWIRSGLVEMEAISDAAFPHGVKRILERSIQPFWMKLDGTFQRGPEGDLERGPDGELVLRDDVAGSDVFKR ATLNTGAEEREKRAAALVAAIKAGRKVK* |
Coding | >OphauB2|4096 ATGAAAACCATATGCCAAGGCTGCAAAACGCAAGTCTGCGCCCTCGCACCTAGACTAGCCCGCCGCTCTGCCGCC CTGCCGCTCTGCACAGGGAGGGTGGGCCCGGCGCGGCAGTTTGGTAGTTCGGGGCCGCGGGGGCTGCTGAGTTTC GGGGTCAAGTCGGTGGCTGATTCGTATCGCGTGCTGGGCGCGTCGGAGGCGCTCTTCAAGGCGTGTGCGGCGCCG GCGGATTATCAGGTTCCGGCATGGAAGAGGGAGGAGGACTGTGTGGAGAAGAGGGAGGATGGGGAGGAGTTGGGC GAGGCCAAGACGCATGGCAACGTGTGGCATAGAGCTCTCCGCCTCCCCGTCAGCTTCAACACTTGGTCGCACGTC ACCATGCTGCACCTCTACCTCATCAATGCGCGCCTCCGCTGCTTTGGGCGCGAAACGTACCGCACCTGGCAGCAA CAGCTCACTGACCACTTCTTCTTCGAGGCGGAAAAAAAGATGCACCTCGACCACGCCATTACGTCGAGCGCCCTG CGCCAGCGCTACCTCAAGGACTTGTTTGTCCAGTGGCGCGGCCTGCTGCTCGCCTACGACGAGGGCCTCATTGCC GGCGACGCCATTCTTGCCAGTGCTTTGTGGCGCAATCTGTGCAAGGGCGATGCTACGACGGATCCATGCGCCTTG CTTGCATTGGTGGGCTGGATACGGTCTGGCTTGGTGGAGATGGAGGCCATTTCAGATGCTGCCTTTCCACACGGC GTGAAGCGCATTCTCGAAAGGTCAATACAGCCCTTTTGGATGAAGCTTGACGGTACCTTTCAGCGCGGGCCTGAA GGTGACCTTGAACGCGGGCCTGATGGTGAGTTGGTCCTGCGCGACGACGTGGCTGGCAGCGACGTGTTCAAAAGG GCCACGTTGAATACGGGAGCCGAGGAAAGGGAAAAAAGGGCAGCAGCCTTGGTGGCGGCAATCAAGGCGGGCAGA AAGGTGAAGTAG |
Transcript | >OphauB2|4096 ATGAAAACCATATGCCAAGGCTGCAAAACGCAAGTCTGCGCCCTCGCACCTAGACTAGCCCGCCGCTCTGCCGCC CTGCCGCTCTGCACAGGGAGGGTGGGCCCGGCGCGGCAGTTTGGTAGTTCGGGGCCGCGGGGGCTGCTGAGTTTC GGGGTCAAGTCGGTGGCTGATTCGTATCGCGTGCTGGGCGCGTCGGAGGCGCTCTTCAAGGCGTGTGCGGCGCCG GCGGATTATCAGGTTCCGGCATGGAAGAGGGAGGAGGACTGTGTGGAGAAGAGGGAGGATGGGGAGGAGTTGGGC GAGGCCAAGACGCATGGCAACGTGTGGCATAGAGCTCTCCGCCTCCCCGTCAGCTTCAACACTTGGTCGCACGTC ACCATGCTGCACCTCTACCTCATCAATGCGCGCCTCCGCTGCTTTGGGCGCGAAACGTACCGCACCTGGCAGCAA CAGCTCACTGACCACTTCTTCTTCGAGGCGGAAAAAAAGATGCACCTCGACCACGCCATTACGTCGAGCGCCCTG CGCCAGCGCTACCTCAAGGACTTGTTTGTCCAGTGGCGCGGCCTGCTGCTCGCCTACGACGAGGGCCTCATTGCC GGCGACGCCATTCTTGCCAGTGCTTTGTGGCGCAATCTGTGCAAGGGCGATGCTACGACGGATCCATGCGCCTTG CTTGCATTGGTGGGCTGGATACGGTCTGGCTTGGTGGAGATGGAGGCCATTTCAGATGCTGCCTTTCCACACGGC GTGAAGCGCATTCTCGAAAGGTCAATACAGCCCTTTTGGATGAAGCTTGACGGTACCTTTCAGCGCGGGCCTGAA GGTGACCTTGAACGCGGGCCTGATGGTGAGTTGGTCCTGCGCGACGACGTGGCTGGCAGCGACGTGTTCAAAAGG GCCACGTTGAATACGGGAGCCGAGGAAAGGGAAAAAAGGGCAGCAGCCTTGGTGGCGGCAATCAAGGCGGGCAGA AAGGTGAAGTAG |
Gene | >OphauB2|4096 ATGAAAACCATATGCCAAGGCTGCAAAACGCAAGTCTGCGCCCTCGCACCTAGACTAGCCCGCCGCTCTGCCGCC CTGCCGCTCTGCACAGGGAGGGTGGGCCCGGCGCGGCAGTTTGGTAGTTCGGGGCCGCGGGGGCTGCTGAGTTTC GGGGTCAAGTCGGTGGCTGATTCGTATCGCGTGCTGGGCGCGTCGGAGGCGCTCTTCAAGGCGTGTGCGGCGCCG GCGGATTATCAGGTTCCGGCATGGAAGAGGGAGGAGGACTGTGTGGAGAAGAGGGAGGATGGGGAGGAGTTGGGC GAGGCCAAGACGCATGGCAACGTGTGGCATAGAGGTTGTCTTTTTTTTTTTTTTCCTTTTTTTCCTTTTTTTTTA AATCCCTTCATCTACAAGGCAGAGTCGAGTCGAGATTCTTCTACAAGACAGAGTCGAGTCGAGATTCTTCTTCGG CTTCTACAAGACAGAGTCGAGCCGACAAAATGGCAGCCTGCAGAAAAAAAAAAAAAAGAGAGAAAAAACAACTTT GCTAACGCTCCTGACCCAGCTCTCCGCCTCCCCGTCAGCTTCAACACTTGGTCGCACGTCACCATGCTGCACCTC TACCTCATCAATGCGCGCCTCCGCTGCTTTGGGCGCGAAACGTACCGCACCTGGCAGCAACAGCTCACTGACCAC TTCTTCTTCGAGGCGGAAAAAAAGATGCACCTCGACCACGCCATTACGTCGAGCGCCCTGCGCCAGCGCTACCTC AAGGACTTGTTTGTCCAGTGGCGCGGCCTGCTGCTCGCCTACGACGAGGGCCTCATTGCCGGCGACGCCATTCTT GCCAGTGCTTTGTGGCGCAATCTGTGCAAGGGCGATGCTACGACGGATCCATGCGCCTTGCTTGCATTGGTGGGC TGGATACGGTCTGGCTTGGTGGAGATGGAGGCCATTTCAGATGCTGCCTTTCCACACGGCGTGAAGCGCATTCTC GAAAGGTCAATACAGCCCTTTTGGATGAAGCTTGACGGTACCTTTCAGCGCGGGCCTGAAGGTGACCTTGAACGC GGGCCTGATGGTGAGTTGGTCCTGCGCGACGACGTGGCTGGCAGCGACGTGTTCAAAAGGGCCACGTTGAATACG GGAGCCGAGGAAAGGGAAAAAAGGGCAGCAGCCTTGGTGGCGGCAATCAAGGCGGGCAGAAAGGTGAAGTAG |