© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|4070 |
| Gene name | |
| Location | Contig_265:11007..13181 |
| Strand | - |
| Gene length (bp) | 2174 |
| Transcript length (bp) | 1953 |
| Coding sequence length (bp) | 1953 |
| Protein length (aa) | 651 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01501 | Glyco_transf_8 | Glycosyl transferase family 8 | 1.4E-18 | 33 | 173 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|H2KYQ5|GYG1_CAEEL | Glycogenin-1 OS=Caenorhabditis elegans GN=gyg-1 PE=1 SV=1 | 6 | 171 | 2.0E-39 |
| sp|O08730|GLYG_RAT | Glycogenin-1 OS=Rattus norvegicus GN=Gyg1 PE=2 SV=4 | 6 | 171 | 2.0E-35 |
| sp|O15488|GLYG2_HUMAN | Glycogenin-2 OS=Homo sapiens GN=GYG2 PE=1 SV=2 | 4 | 249 | 3.0E-35 |
| sp|Q9R062|GLYG_MOUSE | Glycogenin-1 OS=Mus musculus GN=Gyg1 PE=1 SV=3 | 6 | 171 | 4.0E-35 |
| sp|P13280|GLYG_RABIT | Glycogenin-1 OS=Oryctolagus cuniculus GN=GYG1 PE=1 SV=3 | 6 | 171 | 4.0E-35 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|H2KYQ5|GYG1_CAEEL | Glycogenin-1 OS=Caenorhabditis elegans GN=gyg-1 PE=1 SV=1 | 6 | 171 | 2.0E-39 |
| sp|O08730|GLYG_RAT | Glycogenin-1 OS=Rattus norvegicus GN=Gyg1 PE=2 SV=4 | 6 | 171 | 2.0E-35 |
| sp|O15488|GLYG2_HUMAN | Glycogenin-2 OS=Homo sapiens GN=GYG2 PE=1 SV=2 | 4 | 249 | 3.0E-35 |
| sp|Q9R062|GLYG_MOUSE | Glycogenin-1 OS=Mus musculus GN=Gyg1 PE=1 SV=3 | 6 | 171 | 4.0E-35 |
| sp|P13280|GLYG_RABIT | Glycogenin-1 OS=Oryctolagus cuniculus GN=GYG1 PE=1 SV=3 | 6 | 171 | 4.0E-35 |
| sp|P46976|GLYG_HUMAN | Glycogenin-1 OS=Homo sapiens GN=GYG1 PE=1 SV=4 | 6 | 171 | 6.0E-34 |
| sp|P47011|GLG2_YEAST | Glycogenin-2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GLG2 PE=1 SV=1 | 2 | 178 | 1.0E-29 |
| sp|A6ZQJ2|GLG2_YEAS7 | Glycogenin-2 OS=Saccharomyces cerevisiae (strain YJM789) GN=GLG2 PE=3 SV=1 | 2 | 178 | 4.0E-29 |
| sp|A7A018|GLG1_YEAS7 | Glycogenin-1 OS=Saccharomyces cerevisiae (strain YJM789) GN=GLG1 PE=2 SV=2 | 5 | 171 | 9.0E-29 |
| sp|P36143|GLG1_YEAST | Glycogenin-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GLG1 PE=1 SV=4 | 5 | 171 | 1.0E-28 |
| sp|Q8GWW4|GUX2_ARATH | UDP-glucuronate:xylan alpha-glucuronosyltransferase 2 OS=Arabidopsis thaliana GN=GUX2 PE=2 SV=1 | 39 | 196 | 7.0E-17 |
| sp|Q8W4A7|GUX3_ARATH | Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3 OS=Arabidopsis thaliana GN=GUX3 PE=2 SV=1 | 39 | 196 | 3.0E-16 |
| sp|Q9FZ37|GUX4_ARATH | Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4 OS=Arabidopsis thaliana GN=GUX4 PE=3 SV=1 | 39 | 197 | 1.0E-14 |
| sp|F4HZC3|GUX5_ARATH | Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5 OS=Arabidopsis thaliana GN=GUX5 PE=2 SV=1 | 39 | 197 | 1.0E-14 |
| sp|Q9LSB1|GUX1_ARATH | UDP-glucuronate:xylan alpha-glucuronosyltransferase 1 OS=Arabidopsis thaliana GN=GUX1 PE=2 SV=1 | 39 | 196 | 8.0E-14 |
| sp|Q947G8|GOLS1_SOLLC | Galactinol synthase 1 OS=Solanum lycopersicum GN=GOLS1 PE=2 SV=1 | 39 | 196 | 2.0E-08 |
| sp|O22893|GOLS1_ARATH | Galactinol synthase 1 OS=Arabidopsis thaliana GN=GOLS1 PE=1 SV=1 | 39 | 196 | 6.0E-08 |
| sp|O80518|GOLS3_ARATH | Galactinol synthase 3 OS=Arabidopsis thaliana GN=GOLS3 PE=1 SV=1 | 39 | 196 | 2.0E-07 |
| sp|Q8GWB7|GUX6_ARATH | Inositol phosphorylceramide glucuronosyltransferase 1 OS=Arabidopsis thaliana GN=IPUT1 PE=1 SV=1 | 37 | 171 | 6.0E-07 |
| sp|Q9FXB2|GOLS2_ARATH | Galactinol synthase 2 OS=Arabidopsis thaliana GN=GOLS2 PE=1 SV=1 | 39 | 196 | 9.0E-07 |
| sp|O22693|GOLS4_ARATH | Galactinol synthase 4 OS=Arabidopsis thaliana GN=GOLS4 PE=2 SV=1 | 39 | 196 | 9.0E-07 |
| sp|Q4PSY4|GOLS7_ARATH | Galactinol synthase 7 OS=Arabidopsis thaliana GN=GOLS7 PE=2 SV=1 | 39 | 196 | 1.0E-06 |
| sp|Q9XGN4|GOLS1_AJURE | Galactinol synthase 1 OS=Ajuga reptans GN=GOLS1 PE=1 SV=1 | 39 | 209 | 3.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016757 | glycosyltransferase activity | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0003674 | molecular_function | No |
| GO:0016740 | transferase activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 16 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|4070 MELLFLQALYRYVVPVPRLCTDQPTNLYLMNRPDLHSVFTKIYLWKQTQFAKVVYIDADVVAYRAPDELFSITHA FSAAPDVGWPDIFNTGVMVLTPNMGDFYALLNMAQRAISFDGADQGLLNMHFGTSFHRLPFTYNVTPSAHYQYLP AYRHFQSNIVMVHFIGPIKPWFRDRNTSYGNSALDEMTGRWWAVHDRHYRAQEPILDQQPSPQHKDWQSPVSLEL KPSSDLDTHVGANETLEYKPCSSSHQQPPCTLSIDPTPHIQPSPVAKTPQKHDTVQASRSQEFAQQPPQSPPALP MSAWDAQRHSPPRLSKPEAVNFPSTHYHMSADMTPFIPPARYPSPPGSTGYHVPKGASKSRIHAPRPIFPWENNK PRPTRSFTDEGFQSAPTVVQVTPNISNTFLQATDDKGEEQTSSTPTTITTLPSDSWMSFSRVNAWDQSPEISRFI EATQSRQRGRNQGAQGNMASSPSLENRGQRKTKAQGLRLTDFPSQVERPSLPVTPAPIRRPLCWPETHDRLGHDD FGGAPLPAAQGVPSQPEWDPAEQLDKLARLQSEALVQKLGMESDRQCRQAPSGSLPLGSEGVGLEKRQPEPAQLN ILCPQPSSKAPVLAMDKGIEVKNELVPETAIALHDPSSEPLQTILACKDT* |
| Coding | >OphauB2|4070 ATGGAGCTCTTGTTTTTGCAGGCACTTTACCGCTATGTTGTGCCTGTTCCCAGACTCTGCACTGACCAGCCCACC AATCTTTACCTCATGAATCGCCCTGATCTGCACTCGGTCTTTACCAAGATATACTTGTGGAAGCAGACCCAGTTT GCAAAAGTCGTCTACATTGACGCCGATGTGGTTGCCTATCGCGCTCCCGACGAGCTCTTTTCCATTACCCACGCC TTCTCGGCCGCCCCCGACGTTGGCTGGCCCGACATATTCAACACTGGCGTCATGGTCTTGACGCCCAACATGGGC GACTTTTATGCCCTGTTGAACATGGCCCAGAGAGCCATCTCTTTTGACGGTGCGGATCAGGGGCTTCTTAATATG CATTTTGGCACTTCTTTTCACCGCCTCCCCTTCACCTACAACGTGACTCCCTCTGCCCATTACCAATATTTACCC GCCTATCGTCACTTCCAGTCCAATATAGTCATGGTTCATTTCATTGGCCCTATCAAGCCCTGGTTTCGCGACCGC AATACCTCCTATGGCAACTCTGCCCTGGACGAAATGACTGGTCGATGGTGGGCTGTTCATGATCGCCATTACAGA GCTCAGGAACCCATTCTTGACCAGCAACCATCGCCACAGCACAAAGATTGGCAATCTCCTGTCTCCTTGGAGCTC AAACCTAGCTCTGACCTTGATACACATGTTGGCGCCAATGAGACTTTGGAATATAAGCCATGCAGCTCCTCTCAT CAACAGCCTCCTTGTACCCTTTCAATCGACCCCACTCCACATATACAGCCATCTCCTGTTGCCAAAACACCCCAA AAGCATGACACTGTGCAAGCATCACGCAGCCAAGAGTTTGCGCAGCAGCCTCCTCAGTCGCCTCCCGCCCTGCCA ATGAGCGCCTGGGATGCACAAAGGCATTCCCCTCCACGCTTGTCCAAACCAGAGGCAGTCAATTTCCCCTCAACC CACTATCACATGTCGGCAGACATGACCCCATTCATACCGCCAGCCCGATATCCTAGCCCCCCCGGTAGTACGGGG TATCACGTTCCCAAGGGAGCCTCAAAGTCACGCATCCACGCGCCTCGGCCGATATTCCCTTGGGAGAATAACAAG CCCAGGCCAACGAGAAGCTTTACAGATGAAGGATTCCAGTCAGCTCCAACTGTCGTCCAGGTGACACCCAATATT TCAAACACGTTTTTGCAGGCGACAGATGACAAGGGCGAGGAGCAGACTTCCTCAACACCAACAACCATTACGACT CTTCCTTCTGACTCTTGGATGTCTTTTTCCCGTGTCAACGCCTGGGACCAATCTCCCGAAATTTCCCGTTTCATA GAGGCGACTCAATCTCGTCAACGCGGGCGCAATCAAGGCGCTCAAGGAAACATGGCCAGTTCCCCAAGCTTGGAA AACCGTGGCCAGAGGAAAACCAAGGCGCAAGGACTGAGATTGACAGATTTCCCTAGCCAGGTAGAAAGGCCCAGT CTGCCCGTCACACCGGCCCCAATCCGGAGGCCTTTGTGTTGGCCCGAGACGCACGATAGATTGGGACATGATGAT TTCGGAGGCGCGCCGCTCCCAGCAGCTCAAGGCGTTCCCTCACAGCCTGAATGGGATCCGGCCGAGCAACTCGAC AAACTTGCCAGATTGCAGTCTGAAGCGCTGGTGCAGAAGCTTGGCATGGAAAGCGATAGGCAATGTCGACAGGCT CCCTCGGGGTCATTGCCCCTTGGGTCTGAAGGGGTCGGGCTGGAGAAGAGACAGCCTGAGCCCGCTCAACTAAAC ATTCTTTGCCCTCAGCCTTCCAGCAAAGCACCAGTTTTAGCAATGGATAAGGGAATAGAGGTCAAGAATGAGCTG GTGCCCGAGACAGCTATCGCATTGCATGATCCATCGTCAGAGCCGCTACAGACCATTCTTGCTTGCAAGGATACA TAG |
| Transcript | >OphauB2|4070 ATGGAGCTCTTGTTTTTGCAGGCACTTTACCGCTATGTTGTGCCTGTTCCCAGACTCTGCACTGACCAGCCCACC AATCTTTACCTCATGAATCGCCCTGATCTGCACTCGGTCTTTACCAAGATATACTTGTGGAAGCAGACCCAGTTT GCAAAAGTCGTCTACATTGACGCCGATGTGGTTGCCTATCGCGCTCCCGACGAGCTCTTTTCCATTACCCACGCC TTCTCGGCCGCCCCCGACGTTGGCTGGCCCGACATATTCAACACTGGCGTCATGGTCTTGACGCCCAACATGGGC GACTTTTATGCCCTGTTGAACATGGCCCAGAGAGCCATCTCTTTTGACGGTGCGGATCAGGGGCTTCTTAATATG CATTTTGGCACTTCTTTTCACCGCCTCCCCTTCACCTACAACGTGACTCCCTCTGCCCATTACCAATATTTACCC GCCTATCGTCACTTCCAGTCCAATATAGTCATGGTTCATTTCATTGGCCCTATCAAGCCCTGGTTTCGCGACCGC AATACCTCCTATGGCAACTCTGCCCTGGACGAAATGACTGGTCGATGGTGGGCTGTTCATGATCGCCATTACAGA GCTCAGGAACCCATTCTTGACCAGCAACCATCGCCACAGCACAAAGATTGGCAATCTCCTGTCTCCTTGGAGCTC AAACCTAGCTCTGACCTTGATACACATGTTGGCGCCAATGAGACTTTGGAATATAAGCCATGCAGCTCCTCTCAT CAACAGCCTCCTTGTACCCTTTCAATCGACCCCACTCCACATATACAGCCATCTCCTGTTGCCAAAACACCCCAA AAGCATGACACTGTGCAAGCATCACGCAGCCAAGAGTTTGCGCAGCAGCCTCCTCAGTCGCCTCCCGCCCTGCCA ATGAGCGCCTGGGATGCACAAAGGCATTCCCCTCCACGCTTGTCCAAACCAGAGGCAGTCAATTTCCCCTCAACC CACTATCACATGTCGGCAGACATGACCCCATTCATACCGCCAGCCCGATATCCTAGCCCCCCCGGTAGTACGGGG TATCACGTTCCCAAGGGAGCCTCAAAGTCACGCATCCACGCGCCTCGGCCGATATTCCCTTGGGAGAATAACAAG CCCAGGCCAACGAGAAGCTTTACAGATGAAGGATTCCAGTCAGCTCCAACTGTCGTCCAGGTGACACCCAATATT TCAAACACGTTTTTGCAGGCGACAGATGACAAGGGCGAGGAGCAGACTTCCTCAACACCAACAACCATTACGACT CTTCCTTCTGACTCTTGGATGTCTTTTTCCCGTGTCAACGCCTGGGACCAATCTCCCGAAATTTCCCGTTTCATA GAGGCGACTCAATCTCGTCAACGCGGGCGCAATCAAGGCGCTCAAGGAAACATGGCCAGTTCCCCAAGCTTGGAA AACCGTGGCCAGAGGAAAACCAAGGCGCAAGGACTGAGATTGACAGATTTCCCTAGCCAGGTAGAAAGGCCCAGT CTGCCCGTCACACCGGCCCCAATCCGGAGGCCTTTGTGTTGGCCCGAGACGCACGATAGATTGGGACATGATGAT TTCGGAGGCGCGCCGCTCCCAGCAGCTCAAGGCGTTCCCTCACAGCCTGAATGGGATCCGGCCGAGCAACTCGAC AAACTTGCCAGATTGCAGTCTGAAGCGCTGGTGCAGAAGCTTGGCATGGAAAGCGATAGGCAATGTCGACAGGCT CCCTCGGGGTCATTGCCCCTTGGGTCTGAAGGGGTCGGGCTGGAGAAGAGACAGCCTGAGCCCGCTCAACTAAAC ATTCTTTGCCCTCAGCCTTCCAGCAAAGCACCAGTTTTAGCAATGGATAAGGGAATAGAGGTCAAGAATGAGCTG GTGCCCGAGACAGCTATCGCATTGCATGATCCATCGTCAGAGCCGCTACAGACCATTCTTGCTTGCAAGGATACA TAG |
| Gene | >OphauB2|4070 ATGGAGCTCTTGTTTTTGCAGGCACTTTACCGCTATGTTGTGCCTGTTCCCAGACTCTGCACTGACCAGCCCACC AATCTTTACCTCATGAATCGCCCTGATCTGCACTCGGTCTTTACCAAGATATACTTGTGGAAGCAGACCCAGTTT GCAAAAGTCGTCTACATTGACGCCGATGTGGTTGCCTATCGCGCTCCCGACGAGCTCTTTTCCATTACCCACGCC TTCTCGGCCGCCCCCGACGTTGGCTGGCCCGACATATTCAACACTGGCGTCATGGTCTTGACGCCCAACATGGGC GACTTTTATGCCCTGTTGAACATGGCCCAGAGAGCCATCTCTTTTGACGGTGCGGATCAGGGGCTTCTTAATATG CATTTTGGCACTTCTTTTCACCGCCTCCCCTTCACCTACAACGTGACTCCCTCTGCCCATTACCAATATTTACCC GCCTATCGTCACTTCCAGTCCAATATAGTCATGGTTCATTTCATTGGCCCTATCAAGCCCTGGTTTCGCGACCGC AATACCTCCTATGGCAACTCTGCCCTGGACGAAATGACTGGTCGATGGTGGGCTGTTCATGATCGCCATTACAGA GCTCAGGTGACTCTGCGCCCACGCCATCAAGACCATCAGTGGCTAAATTTTGCTTCCAAGGAACCCATTCTTGAC CAGCAACCATCGCCACAGCACAAAGATTGGCAATCTCCTGTCTCCTTGGAGCTCAAACCTAGCTCTGACCTTGAT ACACATGTTGGCGCCAATGAGACTTTGGAATATAAGCCATGCAGCTCCTCTCATCAACAGCCTCCTTGTACCCTT TCAATCGACCCCACTCCACATATACAGCCATCTCCTGTTGCCAAAACACCCCAAAAGCATGACACTGTGCAAGCA TCACGCAGCCAAGAGTTTGCGCAGCAGCCTCCTCAGTCGCCTCCCGCCCTGCCAATGAGCGCCTGGGATGCACAA AGGTGAGATAGAATTCCACCAAATCTCGTATGCCGTCTTNNNNNNNNNNNNNNNNNGCTTGAAAAAAAAAATCAA CTCACAAACCTGCGAGTAGGCATTCCCCTCCACGCTTGTCCAAACCAGAGGCAGTCAATTTCCCCTCAACCCACT ATCACATGTCGGCAGACATGACCCCATTCATACCGCCAGCCCGATATCCTAGCCCCCCCGGTAGTACGGGGTATC ACGTTCCCAAGGGAGCCTCAAAGTCACGCATCCACGCGCCTCGGCCGATATTCCCTTGGGAGAATAACAAGCCCA GGCCAACGAGAAGCTTTACAGATGAAGGATTCCAGTCAGCTCCAACTGTCGTCCAGGTGACACCCAATATTTCAA ACACGTTTTTGCAGGCGACAGATGACAAGGGCGAGGAGCAGACTTCCTCAACACCAACAACCATTACGACTCTTC CTTCTGACTCTTGGATGTCTTTTTCCCGTGTCAACGCCTGGGACCAATCTCCCGAAATTTCCCGTTTCATAGAGG CGACTCAATCTCGTCAACGCGGGCGCAATCAAGGCGCTCAAGGAAACATGGCCAGTTCCCCAAGCTTGGAAAACC GTGGCCAGAGGAAAACCAAGGCGCAAGGACTGAGATTGACAGATTTCCCTAGCCAGGTAGAAAGGCCCAGTCTGC CCGTCACACCGGCCCCAATCCGGAGGCCTTTGTGTTGGCCCGAGACGCACGATAGATTGGGACATGATGATTTCG GAGGCGCGCCGCTCCCAGCAGCTCAAGGCGTTCCCTCACAGCCTGAATGGGTATGTGTGCACGGCCAGCGCTGGA GCCCCGCAGACTGCCCTTGCAGTTTGACTGACAAGTATCAAATGGGCAAGGATCCGGCCGAGCAACTCGACAAAC TTGCCAGATTGCAGTCTGAAGCGCTGGTGCAGAAGCTTGGCATGGAAAGCGATAGGCAATGTCGACAGGCTCCCT CGGGGTCATTGCCCCTTGGGTCTGAAGGGGTCGGGCTGGAGAAGAGACAGCCTGAGCCCGCTCAACTAAACATTC TTTGCCCTCAGCCTTCCAGCAAAGCACCAGTTTTAGCAATGGATAAGGGAATAGAGGTCAAGAATGAGCTGGTGC CCGAGACAGCTATCGCATTGCATGATCCATCGTCAGAGCCGCTACAGACCATTCTTGCTTGCAAGGATACATAG |