© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|4060 |
| Gene name | |
| Location | Contig_262:7444..7882 |
| Strand | + |
| Gene length (bp) | 438 |
| Transcript length (bp) | 438 |
| Coding sequence length (bp) | 438 |
| Protein length (aa) | 146 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF09631 | Sen15 | Sen15 protein | 3.2E-25 | 15 | 145 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q7RY78|SEN15_NEUCR | Probable tRNA-splicing endonuclease subunit tsp-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=tsp-1 PE=3 SV=1 | 8 | 145 | 3.0E-41 |
| sp|Q759Y8|SEN15_ASHGO | tRNA-splicing endonuclease subunit SEN15 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SEN15 PE=3 SV=1 | 4 | 145 | 4.0E-09 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 12 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|4060 MQRHMGAVNGVTACVLYNLEHQHDWTALEVCDSNGNKTRPLIRGLPPRRLYTHPDDQMAALAYERQNGQRPDERI EREWVLPVGLIEKWSFASFSAVFDSVPEPTGGGSTSGTSRGKRIVLAAVDADSTVVYYLMHNSMVKPRQN* |
| Coding | >OphauB2|4060 ATGCAAAGACACATGGGCGCCGTCAACGGCGTTACGGCATGTGTGTTATATAATCTCGAGCATCAGCATGACTGG ACCGCACTTGAGGTGTGCGATAGCAATGGCAACAAGACGCGGCCACTGATCCGAGGTCTTCCACCTCGGCGCCTC TACACGCACCCGGACGACCAGATGGCAGCACTGGCATACGAGCGGCAAAATGGTCAAAGGCCGGATGAGCGCATC GAGCGCGAGTGGGTGCTTCCTGTTGGACTGATAGAGAAGTGGTCGTTTGCCAGCTTCTCTGCCGTCTTTGACTCG GTGCCGGAGCCAACTGGAGGCGGCAGCACCTCTGGCACCTCCAGAGGCAAGCGGATCGTACTTGCAGCCGTTGAC GCCGATTCGACGGTCGTCTATTATTTGATGCACAACAGCATGGTGAAGCCTCGCCAGAACTAA |
| Transcript | >OphauB2|4060 ATGCAAAGACACATGGGCGCCGTCAACGGCGTTACGGCATGTGTGTTATATAATCTCGAGCATCAGCATGACTGG ACCGCACTTGAGGTGTGCGATAGCAATGGCAACAAGACGCGGCCACTGATCCGAGGTCTTCCACCTCGGCGCCTC TACACGCACCCGGACGACCAGATGGCAGCACTGGCATACGAGCGGCAAAATGGTCAAAGGCCGGATGAGCGCATC GAGCGCGAGTGGGTGCTTCCTGTTGGACTGATAGAGAAGTGGTCGTTTGCCAGCTTCTCTGCCGTCTTTGACTCG GTGCCGGAGCCAACTGGAGGCGGCAGCACCTCTGGCACCTCCAGAGGCAAGCGGATCGTACTTGCAGCCGTTGAC GCCGATTCGACGGTCGTCTATTATTTGATGCACAACAGCATGGTGAAGCCTCGCCAGAACTAA |
| Gene | >OphauB2|4060 ATGCAAAGACACATGGGCGCCGTCAACGGCGTTACGGCATGTGTGTTATATAATCTCGAGCATCAGCATGACTGG ACCGCACTTGAGGTGTGCGATAGCAATGGCAACAAGACGCGGCCACTGATCCGAGGTCTTCCACCTCGGCGCCTC TACACGCACCCGGACGACCAGATGGCAGCACTGGCATACGAGCGGCAAAATGGTCAAAGGCCGGATGAGCGCATC GAGCGCGAGTGGGTGCTTCCTGTTGGACTGATAGAGAAGTGGTCGTTTGCCAGCTTCTCTGCCGTCTTTGACTCG GTGCCGGAGCCAACTGGAGGCGGCAGCACCTCTGGCACCTCCAGAGGCAAGCGGATCGTACTTGCAGCCGTTGAC GCCGATTCGACGGTCGTCTATTATTTGATGCACAACAGCATGGTGAAGCCTCGCCAGAACTAA |