Protein ID | OphauB2|4039 |
Gene name | |
Location | Contig_26:152165..153137 |
Strand | + |
Gene length (bp) | 972 |
Transcript length (bp) | 972 |
Coding sequence length (bp) | 972 |
Protein length (aa) | 324 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01040 | UbiA | UbiA prenyltransferase family | 2.4E-18 | 52 | 302 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | Yes |
GO:0016021 | integral component of membrane | Yes |
GO:0003824 | catalytic activity | No |
GO:0110165 | cellular anatomical entity | No |
GO:0003674 | molecular_function | No |
GO:0031224 | intrinsic component of membrane | No |
GO:0016740 | transferase activity | No |
GO:0005575 | cellular_component | No |
Domain # | Start | End | Length |
---|---|---|---|
1 | 46 | 68 | 22 |
2 | 72 | 91 | 19 |
3 | 136 | 158 | 22 |
4 | 168 | 190 | 22 |
5 | 203 | 220 | 17 |
6 | 267 | 289 | 22 |
7 | 302 | 319 | 17 |
Gene cluster ID | Type of secondary metabolism gene |
---|---|
Cluster 18 | (None) |
Orthofinder run ID | 4 |
Orthogroup | 398 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauB2|4039 MSAVSLQRRLSTDPRWREMGPLHLLHQARYHAYSIWLFTRSDIKTIILPSLLFSLLTAPALALFDITTPSLALVR RLPLTLFWIWINLLPFAIDNQRQSDAIAEDGINKPWRVLPSRRMTPRQATILMCCLYPTAVASSLVLGGLEQCLC LIALGFWYNDLRGADNGFVIRQVINAAGFNRFAMGALTVLLGDKQQFIQTRSFFIWQLILAGIVSTTVQTQDMYD QEGDAERGRHTVPLDLGDGLARWTIAVPMTLWCIFCPLFVDSPLIGFAISVSMGLLIAIRCLLFRSVASDKITFI MWNSWLVSIYSLPLLTVAWKQAS* |
Coding | >OphauB2|4039 ATGTCTGCCGTGTCTCTCCAGCGTCGTCTATCTACAGATCCTCGGTGGAGAGAAATGGGTCCTCTACATCTCCTC CACCAGGCCCGCTACCACGCCTATTCAATATGGCTCTTTACACGCAGCGACATCAAAACCATTATCCTTCCAAGC CTTCTCTTCTCCCTCTTGACCGCCCCTGCTCTGGCCTTGTTCGACATCACCACGCCCTCACTTGCCCTTGTCCGC AGACTGCCACTCACCCTATTCTGGATATGGATCAACCTCCTTCCCTTTGCCATTGACAACCAACGGCAGTCAGAT GCCATAGCCGAAGACGGTATAAACAAGCCCTGGCGTGTCCTTCCATCACGGCGCATGACTCCTCGTCAGGCAACA ATTCTCATGTGCTGTCTCTATCCAACGGCCGTCGCCTCCAGCCTTGTTCTCGGCGGCCTTGAGCAGTGCCTCTGC CTCATAGCCCTTGGCTTCTGGTACAATGATCTTCGCGGCGCCGACAATGGCTTCGTCATTCGTCAAGTAATCAAC GCCGCCGGCTTCAACCGCTTTGCCATGGGCGCTCTGACTGTCCTGCTCGGCGACAAGCAGCAGTTTATACAGACA CGCTCCTTTTTCATCTGGCAGCTCATCTTGGCCGGCATTGTCTCAACAACAGTACAGACACAAGACATGTACGAC CAAGAGGGAGATGCTGAGCGTGGCCGACACACAGTCCCTCTCGATCTGGGCGATGGACTGGCTCGCTGGACCATT GCCGTGCCCATGACCCTTTGGTGCATCTTTTGCCCCTTGTTTGTCGACAGTCCCTTGATTGGCTTTGCCATTTCC GTTTCAATGGGCTTGCTCATCGCCATTAGATGTCTCCTATTCAGGAGCGTGGCGTCTGACAAGATTACCTTCATC ATGTGGAACTCGTGGCTGGTTTCTATATACTCATTGCCACTTTTGACAGTAGCTTGGAAGCAAGCTTCATAA |
Transcript | >OphauB2|4039 ATGTCTGCCGTGTCTCTCCAGCGTCGTCTATCTACAGATCCTCGGTGGAGAGAAATGGGTCCTCTACATCTCCTC CACCAGGCCCGCTACCACGCCTATTCAATATGGCTCTTTACACGCAGCGACATCAAAACCATTATCCTTCCAAGC CTTCTCTTCTCCCTCTTGACCGCCCCTGCTCTGGCCTTGTTCGACATCACCACGCCCTCACTTGCCCTTGTCCGC AGACTGCCACTCACCCTATTCTGGATATGGATCAACCTCCTTCCCTTTGCCATTGACAACCAACGGCAGTCAGAT GCCATAGCCGAAGACGGTATAAACAAGCCCTGGCGTGTCCTTCCATCACGGCGCATGACTCCTCGTCAGGCAACA ATTCTCATGTGCTGTCTCTATCCAACGGCCGTCGCCTCCAGCCTTGTTCTCGGCGGCCTTGAGCAGTGCCTCTGC CTCATAGCCCTTGGCTTCTGGTACAATGATCTTCGCGGCGCCGACAATGGCTTCGTCATTCGTCAAGTAATCAAC GCCGCCGGCTTCAACCGCTTTGCCATGGGCGCTCTGACTGTCCTGCTCGGCGACAAGCAGCAGTTTATACAGACA CGCTCCTTTTTCATCTGGCAGCTCATCTTGGCCGGCATTGTCTCAACAACAGTACAGACACAAGACATGTACGAC CAAGAGGGAGATGCTGAGCGTGGCCGACACACAGTCCCTCTCGATCTGGGCGATGGACTGGCTCGCTGGACCATT GCCGTGCCCATGACCCTTTGGTGCATCTTTTGCCCCTTGTTTGTCGACAGTCCCTTGATTGGCTTTGCCATTTCC GTTTCAATGGGCTTGCTCATCGCCATTAGATGTCTCCTATTCAGGAGCGTGGCGTCTGACAAGATTACCTTCATC ATGTGGAACTCGTGGCTGGTTTCTATATACTCATTGCCACTTTTGACAGTAGCTTGGAAGCAAGCTTCATAA |
Gene | >OphauB2|4039 ATGTCTGCCGTGTCTCTCCAGCGTCGTCTATCTACAGATCCTCGGTGGAGAGAAATGGGTCCTCTACATCTCCTC CACCAGGCCCGCTACCACGCCTATTCAATATGGCTCTTTACACGCAGCGACATCAAAACCATTATCCTTCCAAGC CTTCTCTTCTCCCTCTTGACCGCCCCTGCTCTGGCCTTGTTCGACATCACCACGCCCTCACTTGCCCTTGTCCGC AGACTGCCACTCACCCTATTCTGGATATGGATCAACCTCCTTCCCTTTGCCATTGACAACCAACGGCAGTCAGAT GCCATAGCCGAAGACGGTATAAACAAGCCCTGGCGTGTCCTTCCATCACGGCGCATGACTCCTCGTCAGGCAACA ATTCTCATGTGCTGTCTCTATCCAACGGCCGTCGCCTCCAGCCTTGTTCTCGGCGGCCTTGAGCAGTGCCTCTGC CTCATAGCCCTTGGCTTCTGGTACAATGATCTTCGCGGCGCCGACAATGGCTTCGTCATTCGTCAAGTAATCAAC GCCGCCGGCTTCAACCGCTTTGCCATGGGCGCTCTGACTGTCCTGCTCGGCGACAAGCAGCAGTTTATACAGACA CGCTCCTTTTTCATCTGGCAGCTCATCTTGGCCGGCATTGTCTCAACAACAGTACAGACACAAGACATGTACGAC CAAGAGGGAGATGCTGAGCGTGGCCGACACACAGTCCCTCTCGATCTGGGCGATGGACTGGCTCGCTGGACCATT GCCGTGCCCATGACCCTTTGGTGCATCTTTTGCCCCTTGTTTGTCGACAGTCCCTTGATTGGCTTTGCCATTTCC GTTTCAATGGGCTTGCTCATCGCCATTAGATGTCTCCTATTCAGGAGCGTGGCGTCTGACAAGATTACCTTCATC ATGTGGAACTCGTGGCTGGTTTCTATATACTCATTGCCACTTTTGACAGTAGCTTGGAAGCAAGCTTCATAA |