© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|4009 |
| Gene name | |
| Location | Contig_26:74479..75588 |
| Strand | - |
| Gene length (bp) | 1109 |
| Transcript length (bp) | 999 |
| Coding sequence length (bp) | 999 |
| Protein length (aa) | 333 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00241 | Cofilin_ADF | Cofilin/tropomyosin-type actin-binding protein | 1.2E-11 | 12 | 132 |
| PF00241 | Cofilin_ADF | Cofilin/tropomyosin-type actin-binding protein | 8.1E-18 | 185 | 312 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q869T1|TWF_DICDI | Twinfilin OS=Dictyostelium discoideum GN=twfA PE=1 SV=1 | 3 | 332 | 4.0E-41 |
| sp|Q6IBS0|TWF2_HUMAN | Twinfilin-2 OS=Homo sapiens GN=TWF2 PE=1 SV=2 | 2 | 331 | 1.0E-36 |
| sp|Q9Z0P5|TWF2_MOUSE | Twinfilin-2 OS=Mus musculus GN=Twf2 PE=1 SV=1 | 2 | 331 | 2.0E-36 |
| sp|Q5ZM35|TWF2_CHICK | Twinfilin-2 OS=Gallus gallus GN=TWF2 PE=1 SV=1 | 2 | 330 | 3.0E-36 |
| sp|Q12792|TWF1_HUMAN | Twinfilin-1 OS=Homo sapiens GN=TWF1 PE=1 SV=3 | 2 | 331 | 4.0E-35 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q869T1|TWF_DICDI | Twinfilin OS=Dictyostelium discoideum GN=twfA PE=1 SV=1 | 3 | 332 | 4.0E-41 |
| sp|Q6IBS0|TWF2_HUMAN | Twinfilin-2 OS=Homo sapiens GN=TWF2 PE=1 SV=2 | 2 | 331 | 1.0E-36 |
| sp|Q9Z0P5|TWF2_MOUSE | Twinfilin-2 OS=Mus musculus GN=Twf2 PE=1 SV=1 | 2 | 331 | 2.0E-36 |
| sp|Q5ZM35|TWF2_CHICK | Twinfilin-2 OS=Gallus gallus GN=TWF2 PE=1 SV=1 | 2 | 330 | 3.0E-36 |
| sp|Q12792|TWF1_HUMAN | Twinfilin-1 OS=Homo sapiens GN=TWF1 PE=1 SV=3 | 2 | 331 | 4.0E-35 |
| sp|Q91YR1|TWF1_MOUSE | Twinfilin-1 OS=Mus musculus GN=Twf1 PE=1 SV=2 | 2 | 331 | 4.0E-35 |
| sp|Q5RJR2|TWF1_RAT | Twinfilin-1 OS=Rattus norvegicus GN=Twf1 PE=1 SV=1 | 2 | 331 | 6.0E-34 |
| sp|Q5R7N2|TWF1_PONAB | Twinfilin-1 OS=Pongo abelii GN=TWF1 PE=2 SV=1 | 2 | 330 | 6.0E-34 |
| sp|Q5I082|TWF1_XENTR | Twinfilin-1 OS=Xenopus tropicalis GN=twf1 PE=2 SV=1 | 2 | 331 | 5.0E-33 |
| sp|Q7ZXP0|TWF2A_XENLA | Twinfilin-2-A OS=Xenopus laevis GN=twf2-a PE=2 SV=1 | 2 | 330 | 5.0E-33 |
| sp|Q6GMH3|TWF2_DANRE | Twinfilin-2 OS=Danio rerio GN=twf2 PE=2 SV=1 | 69 | 330 | 9.0E-33 |
| sp|Q56JV6|TWF1_BOVIN | Twinfilin-1 OS=Bos taurus GN=TWF1 PE=2 SV=1 | 2 | 330 | 9.0E-33 |
| sp|Q5RFH1|TWF2_PONAB | Twinfilin-2 (Fragment) OS=Pongo abelii GN=TWF2 PE=3 SV=1 | 7 | 331 | 2.0E-32 |
| sp|Q68F50|TWF1_XENLA | Twinfilin-1 OS=Xenopus laevis GN=twf1 PE=2 SV=1 | 2 | 331 | 4.0E-32 |
| sp|Q640W2|TWF2B_XENLA | Twinfilin-2-B OS=Xenopus laevis GN=twf2-b PE=2 SV=1 | 2 | 330 | 7.0E-32 |
| sp|Q9VFM9|TWF_DROME | Twinfilin OS=Drosophila melanogaster GN=twf PE=1 SV=1 | 2 | 330 | 3.0E-31 |
| sp|Q17A58|TWF_AEDAE | Twinfilin OS=Aedes aegypti GN=twf PE=3 SV=1 | 2 | 330 | 3.0E-30 |
| sp|Q7QG28|TWF_ANOGA | Twinfilin OS=Anopheles gambiae GN=twf PE=3 SV=2 | 2 | 330 | 4.0E-30 |
| sp|Q298X4|TWF_DROPS | Twinfilin OS=Drosophila pseudoobscura pseudoobscura GN=twf PE=3 SV=2 | 2 | 330 | 9.0E-30 |
| sp|O94399|TWF1_SCHPO | Twinfilin OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=twf1 PE=1 SV=1 | 5 | 325 | 2.0E-21 |
| sp|P53250|TWF1_YEAST | Twinfilin-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TWF1 PE=1 SV=1 | 2 | 332 | 4.0E-17 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0003779 | actin binding | Yes |
| GO:0005515 | protein binding | No |
| GO:0008092 | cytoskeletal protein binding | No |
| GO:0003674 | molecular_function | No |
| GO:0005488 | binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 23 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|4009 MQSGISASHELQAKFNSMLASADTFALIVKIERESLVPATEIASKSSSFGENLSSLQSCIKPNEALYVILRRYDE APQFLAVTYVPDLAPVRQKTLVASTRLTLVRELGTEHFRETVFLTMADELSENGFKKLDAHNKLAAPLTEEEKTL DEVKKAEQEAGAGTGTREIHLSKSLAMPVAEDAIAAMKELGQDGERLVTMLKINPETEVVELVPESPRPHSIGEL SKAISSTEPRFTLFRFTHTHDGAEQSPLLFFYTCPLTAGNKAIRNRMLYPLMKRAVLEIAKSEAGLELEKRFEVE EPSEITEQLVMDDLHPKAATRQGFSRPKRPGR* |
| Coding | >OphauB2|4009 ATGCAGTCTGGAATCTCTGCATCGCACGAGCTTCAGGCCAAGTTCAACTCAATGCTGGCATCGGCCGACACATTT GCCCTAATCGTCAAGATTGAACGCGAGAGCTTGGTGCCGGCAACAGAGATAGCTTCCAAGTCGTCTTCCTTTGGC GAGAACCTGTCTAGTTTGCAATCATGCATCAAGCCCAACGAAGCACTATATGTCATCTTGAGACGGTATGACGAA GCGCCGCAATTTCTTGCCGTAACGTACGTGCCCGACCTGGCGCCGGTGCGTCAAAAGACTCTGGTCGCATCTACG CGCTTGACGCTGGTACGGGAGCTGGGAACAGAACACTTTCGCGAAACAGTCTTCTTGACCATGGCGGACGAGCTG AGCGAGAACGGCTTTAAGAAGCTGGATGCGCACAACAAGCTGGCAGCTCCGCTGACAGAAGAGGAAAAGACGTTG GACGAAGTCAAAAAGGCGGAACAAGAGGCTGGTGCCGGTACTGGCACGAGGGAGATTCACCTGAGCAAGAGCCTG GCCATGCCTGTTGCTGAGGATGCCATTGCAGCCATGAAGGAGCTTGGCCAGGACGGCGAACGACTGGTGACAATG CTGAAAATCAACCCCGAGACTGAGGTTGTCGAACTGGTGCCCGAGTCGCCACGGCCGCATTCAATTGGAGAGCTC TCCAAGGCTATTTCGTCCACGGAGCCGCGATTTACGCTTTTCCGCTTCACGCACACGCACGACGGTGCCGAACAG AGCCCACTGCTCTTCTTTTACACTTGTCCATTGACGGCTGGCAACAAGGCCATTAGAAACCGCATGCTTTATCCA CTCATGAAGCGTGCAGTGCTGGAGATTGCCAAGTCTGAGGCTGGACTGGAGCTGGAAAAGAGATTTGAAGTGGAA GAGCCAAGCGAGATTACGGAACAATTGGTCATGGACGATTTGCATCCCAAGGCGGCCACCAGGCAAGGCTTTAGC AGACCAAAGCGTCCTGGGCGGTGA |
| Transcript | >OphauB2|4009 ATGCAGTCTGGAATCTCTGCATCGCACGAGCTTCAGGCCAAGTTCAACTCAATGCTGGCATCGGCCGACACATTT GCCCTAATCGTCAAGATTGAACGCGAGAGCTTGGTGCCGGCAACAGAGATAGCTTCCAAGTCGTCTTCCTTTGGC GAGAACCTGTCTAGTTTGCAATCATGCATCAAGCCCAACGAAGCACTATATGTCATCTTGAGACGGTATGACGAA GCGCCGCAATTTCTTGCCGTAACGTACGTGCCCGACCTGGCGCCGGTGCGTCAAAAGACTCTGGTCGCATCTACG CGCTTGACGCTGGTACGGGAGCTGGGAACAGAACACTTTCGCGAAACAGTCTTCTTGACCATGGCGGACGAGCTG AGCGAGAACGGCTTTAAGAAGCTGGATGCGCACAACAAGCTGGCAGCTCCGCTGACAGAAGAGGAAAAGACGTTG GACGAAGTCAAAAAGGCGGAACAAGAGGCTGGTGCCGGTACTGGCACGAGGGAGATTCACCTGAGCAAGAGCCTG GCCATGCCTGTTGCTGAGGATGCCATTGCAGCCATGAAGGAGCTTGGCCAGGACGGCGAACGACTGGTGACAATG CTGAAAATCAACCCCGAGACTGAGGTTGTCGAACTGGTGCCCGAGTCGCCACGGCCGCATTCAATTGGAGAGCTC TCCAAGGCTATTTCGTCCACGGAGCCGCGATTTACGCTTTTCCGCTTCACGCACACGCACGACGGTGCCGAACAG AGCCCACTGCTCTTCTTTTACACTTGTCCATTGACGGCTGGCAACAAGGCCATTAGAAACCGCATGCTTTATCCA CTCATGAAGCGTGCAGTGCTGGAGATTGCCAAGTCTGAGGCTGGACTGGAGCTGGAAAAGAGATTTGAAGTGGAA GAGCCAAGCGAGATTACGGAACAATTGGTCATGGACGATTTGCATCCCAAGGCGGCCACCAGGCAAGGCTTTAGC AGACCAAAGCGTCCTGGGCGGTGA |
| Gene | >OphauB2|4009 ATGCAGTCTGGAATCTCTGGTATTTTCATCGATATTAGTGCTCCATGGAACTAGAGCTAATCCGATTCTTGATAG CATCGCACGAGCTTCAGGCCAAGTTCAACTCAATGCTGGCATCGGCCGACACATTTGCCCTAATCGTCAAGATTG AACGCGAGAGCTTGGTGCCGGCAACAGAGATAGCTTCCAAGTCGTCTTCCTTTGGCGAGAACCTGTCTAGTTTGC AATCATGCATCAAGCCCAACGAAGCACTATATGTCATCTTGAGACGGTATGACGAAGCGCCGCAATTTCTTGCCG TAACGTACGTGCCCGACCTGGCGCCGGTGCGTCAAAAGACTCTGGTCGCATCTACGCGCTTGACGCTGGTACGGG AGCTGGGAACAGAACACTTTCGCGAAACAGTCTTCTTGACCATGGCGGACGAGCTGAGCGAGAACGGCTTTAAGA AGCTGGATGCGCACAACAAGCTGGCAGCTCCGCTGACAGAAGAGGAAAAGACGTTGGACGAAGTCAAAAAGGCGG AACAAGAGGCTGGTGCCGGTACTGGCACGAGGGAGATTCACCTGAGCAAGAGCCTGGCCATGCCTGTTGCTGAGG ATGCCATTGCAGCCATGAAGGAGCTTGGCCAGGACGGCGAACGACTGGTGACAATGCTGGTAATACTGCGGACAG GAATACTTGAGCAAGGCAAGAGGCTGACTTTGGCGCAGAAAATCAACCCCGAGACTGAGGTTGTCGAACTGGTGC CCGAGTCGCCACGGCCGCATTCAATTGGAGAGCTCTCCAAGGCTATTTCGTCCACGGAGCCGCGATTTACGCTTT TCCGCTTCACGCACACGCACGACGGTGCCGAACAGAGCCCACTGCTCTTCTTTTACACTTGTCCATTGACGGCTG GCAACAAGGCCATTAGAAACCGCATGCTTTATCCACTCATGAAGCGTGCAGTGCTGGAGATTGCCAAGTCTGAGG CTGGACTGGAGCTGGAAAAGAGATTTGAAGTGGAAGAGCCAAGCGAGATTACGGAACAATTGGTCATGGACGATT TGCATCCCAAGGCGGCCACCAGGCAAGGCTTTAGCAGACCAAAGCGTCCTGGGCGGTGA |