© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|3961 |
| Gene name | |
| Location | Contig_257:781..1926 |
| Strand | + |
| Gene length (bp) | 1145 |
| Transcript length (bp) | 1017 |
| Coding sequence length (bp) | 1017 |
| Protein length (aa) | 339 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04495 | GRASP55_65 | GRASP55/65 PDZ-like domain | 9.1E-46 | 78 | 210 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q10149|YAT2_SCHPO | Uncharacterized protein C1D4.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1D4.02c PE=4 SV=2 | 1 | 301 | 2.0E-62 |
| sp|Q91X51|GORS1_MOUSE | Golgi reassembly-stacking protein 1 OS=Mus musculus GN=Gorasp1 PE=1 SV=3 | 41 | 209 | 2.0E-35 |
| sp|O35254|GORS1_RAT | Golgi reassembly-stacking protein 1 OS=Rattus norvegicus GN=Gorasp1 PE=1 SV=4 | 41 | 209 | 4.0E-35 |
| sp|Q9BQQ3|GORS1_HUMAN | Golgi reassembly-stacking protein 1 OS=Homo sapiens GN=GORASP1 PE=1 SV=3 | 41 | 209 | 1.0E-34 |
| sp|Q99JX3|GORS2_MOUSE | Golgi reassembly-stacking protein 2 OS=Mus musculus GN=Gorasp2 PE=1 SV=3 | 25 | 209 | 3.0E-33 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q10149|YAT2_SCHPO | Uncharacterized protein C1D4.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1D4.02c PE=4 SV=2 | 1 | 301 | 2.0E-62 |
| sp|Q91X51|GORS1_MOUSE | Golgi reassembly-stacking protein 1 OS=Mus musculus GN=Gorasp1 PE=1 SV=3 | 41 | 209 | 2.0E-35 |
| sp|O35254|GORS1_RAT | Golgi reassembly-stacking protein 1 OS=Rattus norvegicus GN=Gorasp1 PE=1 SV=4 | 41 | 209 | 4.0E-35 |
| sp|Q9BQQ3|GORS1_HUMAN | Golgi reassembly-stacking protein 1 OS=Homo sapiens GN=GORASP1 PE=1 SV=3 | 41 | 209 | 1.0E-34 |
| sp|Q99JX3|GORS2_MOUSE | Golgi reassembly-stacking protein 2 OS=Mus musculus GN=Gorasp2 PE=1 SV=3 | 25 | 209 | 3.0E-33 |
| sp|Q9H8Y8|GORS2_HUMAN | Golgi reassembly-stacking protein 2 OS=Homo sapiens GN=GORASP2 PE=1 SV=3 | 25 | 209 | 4.0E-33 |
| sp|Q9R064|GORS2_RAT | Golgi reassembly-stacking protein 2 OS=Rattus norvegicus GN=Gorasp2 PE=1 SV=3 | 25 | 209 | 1.0E-32 |
| sp|Q04410|GRH1_YEAST | GRASP65 homolog protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GRH1 PE=1 SV=1 | 28 | 320 | 1.0E-25 |
| sp|Q9BQQ3|GORS1_HUMAN | Golgi reassembly-stacking protein 1 OS=Homo sapiens GN=GORASP1 PE=1 SV=3 | 102 | 207 | 2.0E-08 |
| sp|Q91X51|GORS1_MOUSE | Golgi reassembly-stacking protein 1 OS=Mus musculus GN=Gorasp1 PE=1 SV=3 | 118 | 207 | 3.0E-08 |
| sp|O35254|GORS1_RAT | Golgi reassembly-stacking protein 1 OS=Rattus norvegicus GN=Gorasp1 PE=1 SV=4 | 118 | 207 | 6.0E-08 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 51 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|3961 MFNALNRFMSRLDGAEHQQRQHDRGSFGFQVLRNTTLGLSVEPWFDYVVGINGRPLDGPNPTLFAQEIRNCAGRT VTLGLWNAKGQRTREMHIPVPVDTATLGLSLQYAPLSLAANVWHVLDVAPNSPAADASLLPYSDYILGSPEGTLG GESALGELVEDHIGRPLRLYIYNNEYDVTREVTIQPSRDWGGEGALGCMLGYGALHRLPAPLSEPVSGPGETMFD GDINEKSEATLIPAASAAQTIPASQLLVPTQVLDSVPVNTSSKPGKKKERHSHRGQNQLMDDYFKEEEKKSRELD NAPTPKASGVAPPPKAPAATIPRTAEPTDAVKDDEECK* |
| Coding | >OphauB2|3961 ATGTTCAATGCTCTGAATCGCTTCATGTCGCGCCTCGATGGTGCTGAGCATCAACAACGCCAGCATGATAGAGGC TCCTTTGGCTTCCAGGTCTTGAGAAACACCACTCTTGGGCTATCGGTCGAACCATGGTTTGACTATGTCGTGGGT ATCAACGGACGACCTCTTGACGGCCCGAATCCAACTCTCTTTGCCCAAGAGATTCGAAACTGCGCAGGCAGAACT GTCACACTAGGCCTTTGGAACGCCAAGGGTCAACGCACGAGAGAAATGCATATTCCAGTGCCAGTCGATACTGCA ACTCTTGGCTTGTCTCTTCAATACGCACCACTTTCCCTCGCTGCTAATGTATGGCACGTGCTCGATGTGGCGCCA AACTCCCCTGCCGCCGATGCTTCCCTGCTGCCCTACAGCGATTATATCTTGGGGAGTCCTGAAGGTACTCTTGGC GGGGAAAGCGCCTTGGGCGAGCTGGTTGAAGATCACATTGGCAGACCCTTGCGACTCTATATATACAACAATGAG TACGATGTAACAAGAGAGGTGACGATACAGCCAAGTCGGGACTGGGGTGGCGAGGGAGCCTTGGGCTGCATGTTA GGTTACGGCGCTCTACATCGGCTTCCTGCTCCGCTCAGTGAGCCTGTCAGTGGGCCCGGAGAGACAATGTTCGAT GGTGACATCAACGAGAAGAGCGAAGCTACCTTGATCCCCGCTGCTTCAGCCGCACAAACAATACCAGCGAGTCAA TTACTCGTACCGACTCAGGTGCTTGACTCAGTACCCGTGAACACCTCTTCCAAGCCAGGAAAGAAGAAAGAGCGC CACAGCCACCGTGGACAAAACCAGCTCATGGATGACTACTTCAAGGAAGAGGAGAAGAAGAGTCGAGAACTGGAC AATGCCCCGACGCCAAAAGCTTCTGGCGTGGCTCCTCCTCCAAAGGCACCTGCAGCAACAATTCCACGGACAGCC GAGCCCACAGACGCTGTGAAAGACGATGAGGAGTGCAAATAA |
| Transcript | >OphauB2|3961 ATGTTCAATGCTCTGAATCGCTTCATGTCGCGCCTCGATGGTGCTGAGCATCAACAACGCCAGCATGATAGAGGC TCCTTTGGCTTCCAGGTCTTGAGAAACACCACTCTTGGGCTATCGGTCGAACCATGGTTTGACTATGTCGTGGGT ATCAACGGACGACCTCTTGACGGCCCGAATCCAACTCTCTTTGCCCAAGAGATTCGAAACTGCGCAGGCAGAACT GTCACACTAGGCCTTTGGAACGCCAAGGGTCAACGCACGAGAGAAATGCATATTCCAGTGCCAGTCGATACTGCA ACTCTTGGCTTGTCTCTTCAATACGCACCACTTTCCCTCGCTGCTAATGTATGGCACGTGCTCGATGTGGCGCCA AACTCCCCTGCCGCCGATGCTTCCCTGCTGCCCTACAGCGATTATATCTTGGGGAGTCCTGAAGGTACTCTTGGC GGGGAAAGCGCCTTGGGCGAGCTGGTTGAAGATCACATTGGCAGACCCTTGCGACTCTATATATACAACAATGAG TACGATGTAACAAGAGAGGTGACGATACAGCCAAGTCGGGACTGGGGTGGCGAGGGAGCCTTGGGCTGCATGTTA GGTTACGGCGCTCTACATCGGCTTCCTGCTCCGCTCAGTGAGCCTGTCAGTGGGCCCGGAGAGACAATGTTCGAT GGTGACATCAACGAGAAGAGCGAAGCTACCTTGATCCCCGCTGCTTCAGCCGCACAAACAATACCAGCGAGTCAA TTACTCGTACCGACTCAGGTGCTTGACTCAGTACCCGTGAACACCTCTTCCAAGCCAGGAAAGAAGAAAGAGCGC CACAGCCACCGTGGACAAAACCAGCTCATGGATGACTACTTCAAGGAAGAGGAGAAGAAGAGTCGAGAACTGGAC AATGCCCCGACGCCAAAAGCTTCTGGCGTGGCTCCTCCTCCAAAGGCACCTGCAGCAACAATTCCACGGACAGCC GAGCCCACAGACGCTGTGAAAGACGATGAGGAGTGCAAATAA |
| Gene | >OphauB2|3961 ATGTTCAATGCTCTGAATCGCTTCATGTCGCGCCTCGATGGTGCTGAGCATCAACAACGCCAGCATGATAGAGGC TCCTTTGGCTTCCAGGTCTTGAGAAACACCACTCTTGGGCTATCGGTCGAACCATGGTTTGACTATGTCGTGGGT ATCAACGGACGACCTCTTGTGCGTGCGAACTGGCTAGAGCTCGTGTACACATGCAATTCTGACTTGTGCCCGGCA TTCTCTAGGACGGCCCGAATCCAACTCTCTTTGCCCAAGAGATTCGAAACTGCGCAGGCAGAACTGTCACACTAG GCCTTTGGAACGCCAAGGTTAGAGTTGTGTGGCTTTGGCAGCATAGGTCAACCTTGTCTTGCTAATGGACATGTG TCTAGGGTCAACGCACGAGAGAAATGCATATTCCAGTGCCAGTCGATACTGCAACTCTTGGCTTGTCTCTTCAAT ACGCACCACTTTCCCTCGCTGCTAATGTATGGCACGTGCTCGATGTGGCGCCAAACTCCCCTGCCGCCGATGCTT CCCTGCTGCCCTACAGCGATTATATCTTGGGGAGTCCTGAAGGTACTCTTGGCGGGGAAAGCGCCTTGGGCGAGC TGGTTGAAGATCACATTGGCAGACCCTTGCGACTCTATATATACAACAATGAGTACGATGTAACAAGAGAGGTGA CGATACAGCCAAGTCGGGACTGGGGTGGCGAGGGAGCCTTGGGCTGCATGTTAGGTTACGGCGCTCTACATCGGC TTCCTGCTCCGCTCAGTGAGCCTGTCAGTGGGCCCGGAGAGACAATGTTCGATGGTGACATCAACGAGAAGAGCG AAGCTACCTTGATCCCCGCTGCTTCAGCCGCACAAACAATACCAGCGAGTCAATTACTCGTACCGACTCAGGTGC TTGACTCAGTACCCGTGAACACCTCTTCCAAGCCAGGAAAGAAGAAAGAGCGCCACAGCCACCGTGGACAAAACC AGCTCATGGATGACTACTTCAAGGAAGAGGAGAAGAAGAGTCGAGAACTGGACAATGCCCCGACGCCAAAAGCTT CTGGCGTGGCTCCTCCTCCAAAGGCACCTGCAGCAACAATTCCACGGACAGCCGAGCCCACAGACGCTGTGAAAG ACGATGAGGAGTGCAAATAA |