Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauB2\|3940
Gene name
Location	Contig_252:367..2710
Strand	-
Gene length (bp)	2343
Transcript length (bp)	2343
Coding sequence length (bp)	2343
Protein length (aa)	781

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF08318	COG4	COG4 transport protein	2.8E-128	165	505

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|O74990\|COG4_SCHPO	Conserved oligomeric Golgi complex subunit 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cog4 PE=3 SV=1	85	741	7.0E-67
sp\|Q06096\|COG4_YEAST	Conserved oligomeric Golgi complex subunit 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=COG4 PE=1 SV=1	5	776	7.0E-60
sp\|Q3MHG0\|COG4_BOVIN	Conserved oligomeric Golgi complex subunit 4 OS=Bos taurus GN=COG4 PE=2 SV=1	13	776	3.0E-48
sp\|Q8R1U1\|COG4_MOUSE	Conserved oligomeric Golgi complex subunit 4 OS=Mus musculus GN=Cog4 PE=1 SV=1	11	776	5.0E-48
sp\|Q9H9E3\|COG4_HUMAN	Conserved oligomeric Golgi complex subunit 4 OS=Homo sapiens GN=COG4 PE=1 SV=3	11	776	1.0E-47

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|O74990\|COG4_SCHPO	Conserved oligomeric Golgi complex subunit 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cog4 PE=3 SV=1	85	741	7.0E-67
sp\|Q06096\|COG4_YEAST	Conserved oligomeric Golgi complex subunit 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=COG4 PE=1 SV=1	5	776	7.0E-60
sp\|Q3MHG0\|COG4_BOVIN	Conserved oligomeric Golgi complex subunit 4 OS=Bos taurus GN=COG4 PE=2 SV=1	13	776	3.0E-48
sp\|Q8R1U1\|COG4_MOUSE	Conserved oligomeric Golgi complex subunit 4 OS=Mus musculus GN=Cog4 PE=1 SV=1	11	776	5.0E-48
sp\|Q9H9E3\|COG4_HUMAN	Conserved oligomeric Golgi complex subunit 4 OS=Homo sapiens GN=COG4 PE=1 SV=3	11	776	1.0E-47
sp\|Q5R7R6\|COG4_PONAB	Conserved oligomeric Golgi complex subunit 4 OS=Pongo abelii GN=COG4 PE=2 SV=1	11	776	3.0E-47
sp\|Q95TN4\|COG4_DROME	Conserved oligomeric Golgi complex subunit 4 OS=Drosophila melanogaster GN=CG7456 PE=1 SV=1	13	769	1.0E-39
sp\|Q8L838\|COG4_ARATH	Conserved oligomeric Golgi complex subunit 4 OS=Arabidopsis thaliana GN=COG4 PE=2 SV=1	10	770	2.0E-37
sp\|Q95XZ0\|COG4_CAEEL	Conserved oligomeric Golgi complex subunit 4 OS=Caenorhabditis elegans GN=cogc-4 PE=3 SV=1	67	745	3.0E-19
sp\|Q55FT5\|COG4_DICDI	Conserved oligomeric Golgi complex subunit 4 OS=Dictyostelium discoideum GN=cog4 PE=3 SV=1	71	311	1.0E-12

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GO

(None)

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 17	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauB2\|3940 MSASIDEASSAAEVRAALTVLHEHEAVITTQLGALAASQADLSRHLSRLDLLRASLGAQAIAVRSIGSEMLTSAA ETAGRLSNGVKQLDSEKERVEATLGVVEQVAELKACVNGVVGSMGAPQDWEAAAAYLDRASRIPDEVARGAFAGS IVPSVEVPDAPWVTLDQARESLCNLFLREFENAAAAGDGAKVTRFFKLFPLIGRADVGLDVYGRYVCQGVAGTAR AALKDTAAARRDVFFYASALTRLFEHIAQIIDSHGVLVERHYGSGKMVRVIERLQMEADVQGGIILDTWSDERDV DRKLTDVKSYPFSFLVQSFLPQGPRGGIVGNARGASPALGNSAARNSEDEGVNMKEVDGLLSEIALMLGRWALYT RFIATKCRDTTADKEPLVVPELLVKSNLHRKVGSKLTTPYNLMTTFFFRRSVEKAFQLDEYPTGLSLSMSKQIQG NAPYIIMAVDDVMYIVNTVLDKCLSTRQREIIASVLPTVGRVLSSDFIGMIQRKMRDESYPKPIVQGGFPPEEKI IQFIVLVNSLDMANEYLDRIISTRIAIDQDKELPRLRDDGVADWFPFGRDCAFVAGALQTLEASVVAKSTELLNE GIQVLFNQVVKLRLRPVLSDSFRDADYTLSQAELAEVAQENDETEAQVLEQVPRRFEQGWEQLMKPIARIMTPRT FSSLLDMTARHLARVLEKRVLSYGGRATAYGAVRLERDFGGIVDCVARGDYGVREGFARVTQLLMVANMEDEEWD EVEAGEAGMDWVLSMEERRRARSMVIRERE*
Coding	>OphauB2\|3940 ATGTCAGCAAGCATCGACGAGGCCAGCAGCGCGGCCGAGGTGAGGGCGGCGCTGACGGTTCTGCACGAGCACGAA GCAGTCATTACGACGCAGCTGGGCGCCCTCGCAGCCTCGCAGGCAGACTTGTCGCGGCACCTGAGCCGTCTAGAC CTGCTCCGGGCCAGTCTAGGAGCGCAGGCCATTGCAGTGCGGTCGATTGGCAGCGAGATGCTGACGTCTGCGGCC GAGACGGCAGGGCGCCTAAGCAACGGGGTCAAGCAACTCGACAGCGAAAAGGAAAGAGTGGAGGCGACCTTGGGC GTGGTGGAGCAGGTGGCGGAGCTCAAGGCCTGCGTGAATGGCGTGGTGGGCTCCATGGGGGCGCCGCAAGACTGG GAGGCGGCAGCGGCATACCTGGACCGGGCGAGTCGGATCCCGGACGAGGTGGCCCGCGGCGCCTTTGCGGGCAGC ATCGTGCCGAGCGTCGAGGTGCCGGATGCGCCGTGGGTGACGCTGGACCAAGCCCGCGAGAGCTTGTGCAATTTA TTCTTGCGCGAGTTTGAAAACGCAGCGGCAGCGGGCGACGGGGCCAAGGTGACGCGCTTCTTCAAGCTCTTTCCC CTCATTGGACGAGCCGACGTTGGTCTGGATGTCTATGGGCGCTACGTCTGCCAGGGCGTAGCTGGGACGGCGCGC GCGGCGCTCAAGGACACGGCTGCGGCGAGACGAGACGTCTTTTTCTACGCGAGTGCTCTGACGCGTCTCTTTGAG CACATTGCTCAGATTATCGACAGCCACGGAGTCCTGGTGGAGCGGCACTATGGCTCGGGAAAGATGGTGCGCGTC ATTGAGCGACTGCAAATGGAGGCGGATGTTCAGGGCGGCATCATCCTCGATACGTGGAGCGACGAACGCGACGTG GACAGGAAGCTGACGGATGTCAAGAGTTATCCCTTTTCCTTTCTCGTGCAGAGCTTTTTACCGCAGGGTCCGCGG GGTGGTATTGTGGGCAATGCCCGAGGTGCTTCCCCTGCTCTGGGCAACAGCGCTGCCCGCAACAGCGAGGACGAG GGCGTCAATATGAAGGAGGTGGATGGCCTGCTCAGTGAGATTGCCTTGATGCTGGGACGCTGGGCTCTATACACA CGCTTCATTGCGACAAAGTGTCGAGACACGACGGCCGACAAGGAGCCCTTGGTGGTGCCAGAGTTGCTTGTCAAG TCGAATCTACACCGCAAAGTTGGGAGCAAGCTAACGACGCCGTACAATCTCATGACGACCTTTTTCTTTCGCCGC TCGGTTGAAAAGGCCTTTCAGCTTGACGAGTACCCGACGGGCTTGTCTCTTAGCATGAGCAAGCAGATTCAAGGC AATGCGCCCTACATCATCATGGCTGTTGACGACGTCATGTACATTGTCAATACTGTGCTTGACAAGTGCTTGTCT ACACGACAGAGAGAGATTATTGCCTCGGTCTTGCCCACGGTTGGGCGTGTCTTGAGCTCTGATTTCATTGGCATG ATTCAGCGCAAGATGCGCGACGAGTCGTATCCCAAGCCCATTGTTCAAGGAGGATTCCCCCCTGAAGAGAAGATT ATTCAATTCATTGTGCTTGTCAACAGCCTCGACATGGCAAATGAATACTTGGACAGAATCATTAGCACACGCATC GCCATTGACCAGGACAAGGAGCTGCCACGCCTACGAGACGATGGGGTGGCTGACTGGTTTCCCTTTGGCCGCGAC TGCGCGTTTGTTGCAGGCGCCTTGCAAACACTGGAAGCAAGCGTGGTGGCCAAGTCTACAGAATTGCTCAACGAG GGCATCCAAGTGCTCTTCAACCAAGTAGTCAAGCTGCGACTCAGGCCGGTGCTCAGCGATAGCTTTCGCGACGCC GACTACACGCTAAGCCAGGCGGAGCTGGCCGAGGTGGCGCAGGAAAACGACGAGACGGAGGCGCAAGTCTTGGAA CAAGTGCCGCGGCGTTTTGAGCAAGGCTGGGAGCAGCTCATGAAGCCCATTGCACGCATAATGACGCCGCGGACA TTTAGCAGCCTGCTCGACATGACGGCACGCCACTTGGCGCGGGTGCTGGAAAAGCGGGTGCTGAGCTATGGCGGG CGGGCAACGGCCTATGGAGCAGTGAGGCTGGAGCGCGACTTTGGCGGCATTGTGGATTGTGTGGCCAGGGGGGAC TATGGAGTGCGCGAGGGGTTTGCGCGGGTGACGCAGTTGCTCATGGTGGCGAATATGGAGGATGAGGAGTGGGAT GAGGTGGAGGCGGGAGAGGCTGGCATGGATTGGGTCTTGAGCATGGAGGAGAGGAGGAGGGCGAGGAGCATGGTT ATACGGGAGCGGGAGTGA
Transcript	>OphauB2\|3940 ATGTCAGCAAGCATCGACGAGGCCAGCAGCGCGGCCGAGGTGAGGGCGGCGCTGACGGTTCTGCACGAGCACGAA GCAGTCATTACGACGCAGCTGGGCGCCCTCGCAGCCTCGCAGGCAGACTTGTCGCGGCACCTGAGCCGTCTAGAC CTGCTCCGGGCCAGTCTAGGAGCGCAGGCCATTGCAGTGCGGTCGATTGGCAGCGAGATGCTGACGTCTGCGGCC GAGACGGCAGGGCGCCTAAGCAACGGGGTCAAGCAACTCGACAGCGAAAAGGAAAGAGTGGAGGCGACCTTGGGC GTGGTGGAGCAGGTGGCGGAGCTCAAGGCCTGCGTGAATGGCGTGGTGGGCTCCATGGGGGCGCCGCAAGACTGG GAGGCGGCAGCGGCATACCTGGACCGGGCGAGTCGGATCCCGGACGAGGTGGCCCGCGGCGCCTTTGCGGGCAGC ATCGTGCCGAGCGTCGAGGTGCCGGATGCGCCGTGGGTGACGCTGGACCAAGCCCGCGAGAGCTTGTGCAATTTA TTCTTGCGCGAGTTTGAAAACGCAGCGGCAGCGGGCGACGGGGCCAAGGTGACGCGCTTCTTCAAGCTCTTTCCC CTCATTGGACGAGCCGACGTTGGTCTGGATGTCTATGGGCGCTACGTCTGCCAGGGCGTAGCTGGGACGGCGCGC GCGGCGCTCAAGGACACGGCTGCGGCGAGACGAGACGTCTTTTTCTACGCGAGTGCTCTGACGCGTCTCTTTGAG CACATTGCTCAGATTATCGACAGCCACGGAGTCCTGGTGGAGCGGCACTATGGCTCGGGAAAGATGGTGCGCGTC ATTGAGCGACTGCAAATGGAGGCGGATGTTCAGGGCGGCATCATCCTCGATACGTGGAGCGACGAACGCGACGTG GACAGGAAGCTGACGGATGTCAAGAGTTATCCCTTTTCCTTTCTCGTGCAGAGCTTTTTACCGCAGGGTCCGCGG GGTGGTATTGTGGGCAATGCCCGAGGTGCTTCCCCTGCTCTGGGCAACAGCGCTGCCCGCAACAGCGAGGACGAG GGCGTCAATATGAAGGAGGTGGATGGCCTGCTCAGTGAGATTGCCTTGATGCTGGGACGCTGGGCTCTATACACA CGCTTCATTGCGACAAAGTGTCGAGACACGACGGCCGACAAGGAGCCCTTGGTGGTGCCAGAGTTGCTTGTCAAG TCGAATCTACACCGCAAAGTTGGGAGCAAGCTAACGACGCCGTACAATCTCATGACGACCTTTTTCTTTCGCCGC TCGGTTGAAAAGGCCTTTCAGCTTGACGAGTACCCGACGGGCTTGTCTCTTAGCATGAGCAAGCAGATTCAAGGC AATGCGCCCTACATCATCATGGCTGTTGACGACGTCATGTACATTGTCAATACTGTGCTTGACAAGTGCTTGTCT ACACGACAGAGAGAGATTATTGCCTCGGTCTTGCCCACGGTTGGGCGTGTCTTGAGCTCTGATTTCATTGGCATG ATTCAGCGCAAGATGCGCGACGAGTCGTATCCCAAGCCCATTGTTCAAGGAGGATTCCCCCCTGAAGAGAAGATT ATTCAATTCATTGTGCTTGTCAACAGCCTCGACATGGCAAATGAATACTTGGACAGAATCATTAGCACACGCATC GCCATTGACCAGGACAAGGAGCTGCCACGCCTACGAGACGATGGGGTGGCTGACTGGTTTCCCTTTGGCCGCGAC TGCGCGTTTGTTGCAGGCGCCTTGCAAACACTGGAAGCAAGCGTGGTGGCCAAGTCTACAGAATTGCTCAACGAG GGCATCCAAGTGCTCTTCAACCAAGTAGTCAAGCTGCGACTCAGGCCGGTGCTCAGCGATAGCTTTCGCGACGCC GACTACACGCTAAGCCAGGCGGAGCTGGCCGAGGTGGCGCAGGAAAACGACGAGACGGAGGCGCAAGTCTTGGAA CAAGTGCCGCGGCGTTTTGAGCAAGGCTGGGAGCAGCTCATGAAGCCCATTGCACGCATAATGACGCCGCGGACA TTTAGCAGCCTGCTCGACATGACGGCACGCCACTTGGCGCGGGTGCTGGAAAAGCGGGTGCTGAGCTATGGCGGG CGGGCAACGGCCTATGGAGCAGTGAGGCTGGAGCGCGACTTTGGCGGCATTGTGGATTGTGTGGCCAGGGGGGAC TATGGAGTGCGCGAGGGGTTTGCGCGGGTGACGCAGTTGCTCATGGTGGCGAATATGGAGGATGAGGAGTGGGAT GAGGTGGAGGCGGGAGAGGCTGGCATGGATTGGGTCTTGAGCATGGAGGAGAGGAGGAGGGCGAGGAGCATGGTT ATACGGGAGCGGGAGTGA
Gene	>OphauB2\|3940 ATGTCAGCAAGCATCGACGAGGCCAGCAGCGCGGCCGAGGTGAGGGCGGCGCTGACGGTTCTGCACGAGCACGAA GCAGTCATTACGACGCAGCTGGGCGCCCTCGCAGCCTCGCAGGCAGACTTGTCGCGGCACCTGAGCCGTCTAGAC CTGCTCCGGGCCAGTCTAGGAGCGCAGGCCATTGCAGTGCGGTCGATTGGCAGCGAGATGCTGACGTCTGCGGCC GAGACGGCAGGGCGCCTAAGCAACGGGGTCAAGCAACTCGACAGCGAAAAGGAAAGAGTGGAGGCGACCTTGGGC GTGGTGGAGCAGGTGGCGGAGCTCAAGGCCTGCGTGAATGGCGTGGTGGGCTCCATGGGGGCGCCGCAAGACTGG GAGGCGGCAGCGGCATACCTGGACCGGGCGAGTCGGATCCCGGACGAGGTGGCCCGCGGCGCCTTTGCGGGCAGC ATCGTGCCGAGCGTCGAGGTGCCGGATGCGCCGTGGGTGACGCTGGACCAAGCCCGCGAGAGCTTGTGCAATTTA TTCTTGCGCGAGTTTGAAAACGCAGCGGCAGCGGGCGACGGGGCCAAGGTGACGCGCTTCTTCAAGCTCTTTCCC CTCATTGGACGAGCCGACGTTGGTCTGGATGTCTATGGGCGCTACGTCTGCCAGGGCGTAGCTGGGACGGCGCGC GCGGCGCTCAAGGACACGGCTGCGGCGAGACGAGACGTCTTTTTCTACGCGAGTGCTCTGACGCGTCTCTTTGAG CACATTGCTCAGATTATCGACAGCCACGGAGTCCTGGTGGAGCGGCACTATGGCTCGGGAAAGATGGTGCGCGTC ATTGAGCGACTGCAAATGGAGGCGGATGTTCAGGGCGGCATCATCCTCGATACGTGGAGCGACGAACGCGACGTG GACAGGAAGCTGACGGATGTCAAGAGTTATCCCTTTTCCTTTCTCGTGCAGAGCTTTTTACCGCAGGGTCCGCGG GGTGGTATTGTGGGCAATGCCCGAGGTGCTTCCCCTGCTCTGGGCAACAGCGCTGCCCGCAACAGCGAGGACGAG GGCGTCAATATGAAGGAGGTGGATGGCCTGCTCAGTGAGATTGCCTTGATGCTGGGACGCTGGGCTCTATACACA CGCTTCATTGCGACAAAGTGTCGAGACACGACGGCCGACAAGGAGCCCTTGGTGGTGCCAGAGTTGCTTGTCAAG TCGAATCTACACCGCAAAGTTGGGAGCAAGCTAACGACGCCGTACAATCTCATGACGACCTTTTTCTTTCGCCGC TCGGTTGAAAAGGCCTTTCAGCTTGACGAGTACCCGACGGGCTTGTCTCTTAGCATGAGCAAGCAGATTCAAGGC AATGCGCCCTACATCATCATGGCTGTTGACGACGTCATGTACATTGTCAATACTGTGCTTGACAAGTGCTTGTCT ACACGACAGAGAGAGATTATTGCCTCGGTCTTGCCCACGGTTGGGCGTGTCTTGAGCTCTGATTTCATTGGCATG ATTCAGCGCAAGATGCGCGACGAGTCGTATCCCAAGCCCATTGTTCAAGGAGGATTCCCCCCTGAAGAGAAGATT ATTCAATTCATTGTGCTTGTCAACAGCCTCGACATGGCAAATGAATACTTGGACAGAATCATTAGCACACGCATC GCCATTGACCAGGACAAGGAGCTGCCACGCCTACGAGACGATGGGGTGGCTGACTGGTTTCCCTTTGGCCGCGAC TGCGCGTTTGTTGCAGGCGCCTTGCAAACACTGGAAGCAAGCGTGGTGGCCAAGTCTACAGAATTGCTCAACGAG GGCATCCAAGTGCTCTTCAACCAAGTAGTCAAGCTGCGACTCAGGCCGGTGCTCAGCGATAGCTTTCGCGACGCC GACTACACGCTAAGCCAGGCGGAGCTGGCCGAGGTGGCGCAGGAAAACGACGAGACGGAGGCGCAAGTCTTGGAA CAAGTGCCGCGGCGTTTTGAGCAAGGCTGGGAGCAGCTCATGAAGCCCATTGCACGCATAATGACGCCGCGGACA TTTAGCAGCCTGCTCGACATGACGGCACGCCACTTGGCGCGGGTGCTGGAAAAGCGGGTGCTGAGCTATGGCGGG CGGGCAACGGCCTATGGAGCAGTGAGGCTGGAGCGCGACTTTGGCGGCATTGTGGATTGTGTGGCCAGGGGGGAC TATGGAGTGCGCGAGGGGTTTGCGCGGGTGACGCAGTTGCTCATGGTGGCGAATATGGAGGATGAGGAGTGGGAT GAGGTGGAGGCGGGAGAGGCTGGCATGGATTGGGTCTTGAGCATGGAGGAGAGGAGGAGGGCGAGGAGCATGGTT ATACGGGAGCGGGAGTGA

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