Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|3900
Gene name
LocationContig_25:113975..114805
Strand+
Gene length (bp)830
Transcript length (bp)663
Coding sequence length (bp)663
Protein length (aa) 221

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 24 0.45

Transmembrane Domains

Domain # Start End Length
1 13 35 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|3900
MAHLVRRASLAMAVFVAPAWCAASPPLAATTAAIFLPYYDSNDWSVLRGSVVASDAAAKETTYTIFCPTQTPPAC
DLALDFPFIVVEGPSTLKFHGTHTSTLTANLECKLNASTAATCSGYSSYASGYLNTGSAGPMETSWTSTLSGSDV
VWNVLTLTETPTATHDDLKPTDTNQNGATVASSVLYYPTPTAQGQGAANGLRPASLVMVAAASLALLCAS*
Coding >OphauB2|3900
ATGGCCCACCTCGTTCGGCGCGCCAGTCTGGCCATGGCCGTCTTCGTGGCCCCGGCCTGGTGCGCCGCCTCGCCG
CCACTGGCAGCCACCACGGCCGCCATTTTTCTGCCCTACTACGATAGCAATGACTGGTCTGTCCTGCGGGGCAGC
GTCGTGGCCAGCGATGCAGCAGCCAAGGAGACGACATACACCATTTTTTGCCCTACGCAGACGCCCCCTGCTTGC
GACTTGGCGCTAGACTTTCCCTTTATTGTTGTCGAGGGTCCCAGCACCCTCAAGTTTCACGGCACCCATACTTCC
ACCCTAACCGCAAACCTTGAGTGCAAGCTCAATGCCTCGACGGCTGCCACGTGCTCGGGCTACTCGAGCTATGCG
TCTGGCTACTTGAACACCGGCAGTGCTGGCCCAATGGAAACTTCGTGGACGTCGACGCTCTCGGGCTCCGACGTT
GTCTGGAACGTCTTGACTCTGACGGAGACTCCCACGGCGACGCATGACGATCTCAAGCCGACGGACACGAATCAA
AACGGTGCCACGGTTGCCTCGTCGGTGCTCTACTACCCCACGCCCACTGCCCAGGGACAAGGAGCAGCAAATGGC
CTGCGCCCTGCCAGTCTGGTCATGGTTGCGGCTGCCAGTCTTGCTCTTCTCTGCGCATCCTGA
Transcript >OphauB2|3900
ATGGCCCACCTCGTTCGGCGCGCCAGTCTGGCCATGGCCGTCTTCGTGGCCCCGGCCTGGTGCGCCGCCTCGCCG
CCACTGGCAGCCACCACGGCCGCCATTTTTCTGCCCTACTACGATAGCAATGACTGGTCTGTCCTGCGGGGCAGC
GTCGTGGCCAGCGATGCAGCAGCCAAGGAGACGACATACACCATTTTTTGCCCTACGCAGACGCCCCCTGCTTGC
GACTTGGCGCTAGACTTTCCCTTTATTGTTGTCGAGGGTCCCAGCACCCTCAAGTTTCACGGCACCCATACTTCC
ACCCTAACCGCAAACCTTGAGTGCAAGCTCAATGCCTCGACGGCTGCCACGTGCTCGGGCTACTCGAGCTATGCG
TCTGGCTACTTGAACACCGGCAGTGCTGGCCCAATGGAAACTTCGTGGACGTCGACGCTCTCGGGCTCCGACGTT
GTCTGGAACGTCTTGACTCTGACGGAGACTCCCACGGCGACGCATGACGATCTCAAGCCGACGGACACGAATCAA
AACGGTGCCACGGTTGCCTCGTCGGTGCTCTACTACCCCACGCCCACTGCCCAGGGACAAGGAGCAGCAAATGGC
CTGCGCCCTGCCAGTCTGGTCATGGTTGCGGCTGCCAGTCTTGCTCTTCTCTGCGCATCCTGA
Gene >OphauB2|3900
ATGGCCCACCTCGTTCGGCGCGCCAGTCTGGCCATGGCCGTCTTCGTGGCCCCGGCCTGGTGCGCCGCCTCGCCG
CCACTGGCAGCCACCACGGCCGCCATTTTTCTGCCCTACTACGATAGCAATGACTGGTCTGTCCTGCGGGGCAGC
GTCGTGGCCAGCGCAAGTCGAGCCCCGCCCCCAGACGAGGTGCTCGCGTCTTCTGTTTGCTAACGCCCTTGGCTT
GCATCAGGATGCAGCAGCCAAGGAGACGACATACACCATTTTTTGCCCTACGCAGACGCCCCCTGCTTGCGACTT
GGCGCTAGACTTTCCCTTTATTGTTGTCGAGGGTCCCAGCACCCTCAAGTTTCACGGCACCCATACTTCCACCCT
GTGCGTATCTCTCTTGTTGCTTGTGCATGCACCCTCTCGATACTACAACAAGGACTGACTTGAAGCCGTCTCTGT
TTTTGTTTTTTTTTGGGGTCAGAACCGCAAACCTTGAGTGCAAGCTCAATGCCTCGACGGCTGCCACGTGCTCGG
GCTACTCGAGCTATGCGTCTGGCTACTTGAACACCGGCAGTGCTGGCCCAATGGAAACTTCGTGGACGTCGACGC
TCTCGGGCTCCGACGTTGTCTGGAACGTCTTGACTCTGACGGAGACTCCCACGGCGACGCATGACGATCTCAAGC
CGACGGACACGAATCAAAACGGTGCCACGGTTGCCTCGTCGGTGCTCTACTACCCCACGCCCACTGCCCAGGGAC
AAGGAGCAGCAAATGGCCTGCGCCCTGCCAGTCTGGTCATGGTTGCGGCTGCCAGTCTTGCTCTTCTCTGCGCAT
CCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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