Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|3874
Gene name
LocationContig_25:46118..47053
Strand+
Gene length (bp)935
Transcript length (bp)714
Coding sequence length (bp)714
Protein length (aa) 238

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03227 GILT Gamma interferon inducible lysosomal thiol reductase (GILT) 2.0E-18 58 155

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor Yes
GO:0003824 catalytic activity No
GO:0003674 molecular_function No
GO:0016667 oxidoreductase activity, acting on a sulfur group of donors No
GO:0016491 oxidoreductase activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 23 0.5

Transmembrane Domains

Domain # Start End Length
1 7 29 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|3874
MPRRTRPVVRLSLLALVLCALGYYYAFTPRLSTAKQHLSSLSPNLAFSSNPKKLVPLEAHIISKCPDTRDALRQL
ILPAMQRVSDKVDFRLNYIGTPTENDGVDCKHGPSECLGNIIELCARELYPNPKTNLGFIMCLTKDYQHIPDRGL
IEDCALEHAIDFDALNECATRDDGAHGLEMLRHSIERTAKANVTISCTIRLNDQVYCIRDGHEWKDCPKGPEVDS
LVAAIDELASLL*
Coding >OphauB2|3874
ATGCCTCGTCGGACACGTCCCGTTGTGCGACTGTCCCTCTTGGCCCTTGTGCTTTGCGCCCTGGGCTACTACTAT
GCCTTTACGCCTCGCCTCTCAACCGCAAAGCAGCACTTGTCTTCTCTTTCGCCCAACCTAGCCTTTTCCAGCAAC
CCCAAGAAGCTGGTGCCTCTTGAGGCTCACATTATCAGCAAGTGTCCCGACACCAGGGATGCCCTACGACAGCTC
ATCTTGCCTGCTATGCAGCGCGTCAGCGACAAGGTTGACTTTAGGCTCAACTACATTGGAACCCCGACAGAAAAC
GACGGCGTCGACTGCAAGCACGGCCCCTCGGAGTGTCTAGGCAACATTATCGAGCTTTGCGCTCGCGAGCTATAC
CCCAACCCCAAGACCAACCTGGGCTTCATCATGTGCCTGACCAAGGACTACCAACACATTCCCGACCGCGGCCTC
ATTGAAGACTGCGCTCTGGAGCACGCCATCGACTTTGACGCCCTTAACGAGTGCGCCACGCGCGATGACGGCGCC
CACGGGCTCGAGATGCTTCGCCACAGCATTGAACGCACAGCAAAGGCCAATGTGACTATTAGCTGCACCATTCGC
CTCAATGACCAAGTGTACTGCATCCGCGACGGCCATGAATGGAAGGACTGCCCCAAGGGCCCCGAGGTGGACAGC
CTGGTTGCGGCTATTGACGAGCTTGCAAGCTTGCTTTGA
Transcript >OphauB2|3874
ATGCCTCGTCGGACACGTCCCGTTGTGCGACTGTCCCTCTTGGCCCTTGTGCTTTGCGCCCTGGGCTACTACTAT
GCCTTTACGCCTCGCCTCTCAACCGCAAAGCAGCACTTGTCTTCTCTTTCGCCCAACCTAGCCTTTTCCAGCAAC
CCCAAGAAGCTGGTGCCTCTTGAGGCTCACATTATCAGCAAGTGTCCCGACACCAGGGATGCCCTACGACAGCTC
ATCTTGCCTGCTATGCAGCGCGTCAGCGACAAGGTTGACTTTAGGCTCAACTACATTGGAACCCCGACAGAAAAC
GACGGCGTCGACTGCAAGCACGGCCCCTCGGAGTGTCTAGGCAACATTATCGAGCTTTGCGCTCGCGAGCTATAC
CCCAACCCCAAGACCAACCTGGGCTTCATCATGTGCCTGACCAAGGACTACCAACACATTCCCGACCGCGGCCTC
ATTGAAGACTGCGCTCTGGAGCACGCCATCGACTTTGACGCCCTTAACGAGTGCGCCACGCGCGATGACGGCGCC
CACGGGCTCGAGATGCTTCGCCACAGCATTGAACGCACAGCAAAGGCCAATGTGACTATTAGCTGCACCATTCGC
CTCAATGACCAAGTGTACTGCATCCGCGACGGCCATGAATGGAAGGACTGCCCCAAGGGCCCCGAGGTGGACAGC
CTGGTTGCGGCTATTGACGAGCTTGCAAGCTTGCTTTGA
Gene >OphauB2|3874
ATGCCTCGTCGGACACGTCCCGTTGTGCGACTGTCCCTCTTGGCCCTTGTGCTTTGCGCCCTGGGCTACTACTAT
GCCTTTACGCCTCGCCTCTCAACCGCAAAGCAGCACTTGTCTTCTCTTTCGCCCAACCTAGCCTTTTCCAGCAAC
CCCAAGAAGCTGGTGCCTCTTGAGGCTCACATTATCAGCAAGTGTCCCGACACCAGGGTAGGCTTCTTTTTTTTC
TTCTTGTTGCAGACTTTGCGCTCCGACTGACTGGCGTCTGTCTATTCTCTTGTGTTTAGGATGCCCTACGACAGC
TCATCTTGCCTGCTATGCAGCGCGTCAGCGACAAGGTTGACTTTAGGCTCAACTACATTGGAACGTGAGCAACTC
TCTCTTGCGCCACAGCTTCTTTATCCTCGGCACCTAACACGCTTTGCCCTTGGGCCTTGTCCCTCTACAGCCCGA
CAGAAAACGACGGCGTCGACTGCAAGCACGGCCCCTCGGAGTGTCTAGGCAACATTATCGAGCTTTGCGCTCGCG
AGCTATACCCCAACCCCAAGACCAACCTGGGCTTCATCATGTGCCTGACCAAGGACTACCAACACATTCCCGACC
GCGGCCTCATTGAAGACTGCGCTCTGGAGCACGCCATCGACTTTGACGCCCTTAACGAGTGCGCCACGCGCGATG
ACGGCGCCCACGGGCTCGAGATGCTTCGCCACAGCATTGAACGCACAGCAAAGGTGAGGCAGCGCCAAGTCTGCG
CGCCCTTTTACAACAAGAGACTAACCCAAGGGCACCGCTAGGCCAATGTGACTATTAGCTGCACCATTCGCCTCA
ATGACCAAGTGTACTGCATCCGCGACGGCCATGAATGGAAGGACTGCCCCAAGGGCCCCGAGGTGGACAGCCTGG
TTGCGGCTATTGACGAGCTTGCAAGCTTGCTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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