© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | OphauB2|3870 |
| Gene name | |
| Location | Contig_25:35314..37179 |
| Strand | - |
| Gene length (bp) | 1865 |
| Transcript length (bp) | 1650 |
| Coding sequence length (bp) | 1650 |
| Protein length (aa) | 550 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 8.3E-16 | 125 | 386 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.2E-08 | 405 | 526 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P46996|YJQ3_YEAST | Uncharacterized membrane protein YJL163C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YJL163C PE=1 SV=1 | 123 | 521 | 6.0E-18 |
| sp|O13714|YDZ7_SCHPO | Uncharacterized membrane protein C14C4.07 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC14C4.07 PE=1 SV=1 | 49 | 521 | 2.0E-17 |
| sp|P02982|TCR1_ECOLX | Tetracycline resistance protein, class A OS=Escherichia coli GN=tetA PE=3 SV=2 | 130 | 510 | 3.0E-09 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0051179 | localization | No |
| GO:0005215 | transporter activity | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 40 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 41 | 63 | 22 |
| 2 | 111 | 130 | 19 |
| 3 | 145 | 167 | 22 |
| 4 | 174 | 196 | 22 |
| 5 | 211 | 233 | 22 |
| 6 | 240 | 262 | 22 |
| 7 | 325 | 347 | 22 |
| 8 | 368 | 387 | 19 |
| 9 | 407 | 429 | 22 |
| 10 | 434 | 456 | 22 |
| 11 | 476 | 495 | 19 |
| 12 | 502 | 524 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|3870 MASMQRRGATEGDPLLGDSGQVVVGATREPSEQPWWRTPSVYWLIGPFFLFSLAFGGILVPKLNLMLELVCRKHL ADRAPTVQSLSTVQPWAALVGGDDPQCKAPDIQRRVATLSLFINLITGGLSAVVAPKIGHFSDGYGRLRLLALAS CGGLLGELVTVLVAKFPDAIDYRWLLLGAVFDGMGGSFTTGSILSQSYTSDCTPPSRRSVSVGYIQACLFSGLAL GPVIAGYFAKWTGSLLSVFYVVVVCHALLILFLGLVVPESVSKDNRLLVRQRWRKEKEARALGVAPSFSSAQQKW NPLAPLAILWPTGPGTSSRLRVNLLALAMCDATIMGGALAATAVVILYAEYTFNWGNLETSRFVSAMSLMRVMIL MGIFPLVNYFGRVRPRRGRAATRDTNSGSDRLDGWLLSFALLCEVLGCLGYTLGRTESLFFGSGFFTAFGALGMA TTQAALTKHVPAERVGQVLGAVGMLHALARVIGPVIFSGLYAATVATFPQAIFVALGAMYGIALIISFVVQPGVH WEGEHQGGTADAADVAVSGDQVCF* |
| Coding | >OphauB2|3870 ATGGCTTCTATGCAGAGACGGGGCGCGACAGAAGGCGATCCCCTACTCGGCGACAGTGGCCAAGTCGTCGTCGGA GCTACCCGTGAGCCATCAGAGCAGCCCTGGTGGCGCACACCATCTGTCTATTGGCTCATTGGGCCCTTTTTCCTC TTTAGCCTGGCTTTTGGAGGCATCTTGGTCCCCAAGCTCAATCTCATGCTCGAACTCGTCTGCCGCAAGCATCTC GCAGACAGGGCGCCCACAGTTCAATCATTATCCACGGTCCAGCCATGGGCAGCCCTTGTGGGCGGCGATGATCCG CAGTGCAAGGCGCCAGATATTCAACGTCGCGTAGCCACGCTGTCCTTGTTCATCAATCTAATCACTGGCGGCCTC AGTGCCGTCGTGGCGCCCAAGATTGGCCACTTTTCCGACGGCTACGGACGTCTAAGGCTGTTGGCACTGGCCTCT TGCGGCGGCCTGCTGGGCGAGCTAGTCACGGTCCTCGTGGCAAAGTTTCCCGACGCCATTGACTATCGCTGGCTC CTCCTCGGCGCAGTCTTTGACGGCATGGGCGGTTCCTTTACAACTGGCAGTATTCTCAGCCAGTCGTACACGAGC GACTGCACGCCTCCCTCTCGGCGGTCAGTCTCGGTGGGATATATCCAAGCCTGCCTCTTTAGCGGTCTGGCCCTT GGCCCCGTAATTGCCGGATACTTTGCCAAGTGGACGGGCAGCCTCTTGTCCGTCTTTTATGTCGTTGTTGTCTGC CACGCCCTGCTGATTCTCTTCTTGGGCCTGGTTGTGCCCGAGTCTGTTTCAAAGGACAACCGGCTCTTGGTCCGA CAACGATGGCGCAAGGAAAAGGAAGCTCGCGCCCTGGGTGTGGCGCCGTCATTTTCCAGTGCGCAGCAAAAGTGG AATCCCCTGGCTCCTCTGGCAATTCTCTGGCCAACGGGCCCCGGCACGTCGTCGAGACTGCGCGTCAACTTGCTG GCGCTGGCCATGTGCGACGCAACCATCATGGGGGGCGCGCTTGCTGCGACAGCCGTGGTGATTCTATACGCCGAG TACACCTTTAACTGGGGGAACCTCGAGACGTCTAGATTTGTGTCAGCCATGTCCCTGATGCGTGTCATGATTCTC ATGGGCATCTTCCCACTCGTCAATTACTTTGGGCGAGTACGGCCAAGGCGAGGTCGGGCGGCGACTCGCGACACC AACTCGGGCTCTGACAGGCTCGACGGCTGGCTCCTGTCCTTTGCCCTCTTGTGCGAGGTGCTGGGCTGCCTTGGC TACACGCTTGGCCGGACAGAGTCTCTCTTTTTTGGCAGCGGCTTCTTTACCGCCTTTGGAGCACTGGGCATGGCC ACCACGCAGGCTGCCCTGACCAAGCACGTCCCAGCAGAGCGCGTGGGTCAGGTGCTCGGCGCCGTGGGCATGTTG CACGCCCTGGCCAGGGTGATTGGGCCCGTGATATTCAGCGGCTTATATGCGGCGACGGTGGCAACCTTTCCGCAG GCCATTTTTGTCGCTCTTGGCGCCATGTATGGCATTGCGCTCATCATTAGCTTTGTCGTCCAGCCGGGTGTTCAT TGGGAGGGAGAGCACCAAGGTGGTACTGCAGATGCAGCCGACGTAGCCGTCAGTGGAGATCAGGTTTGCTTCTAG |
| Transcript | >OphauB2|3870 ATGGCTTCTATGCAGAGACGGGGCGCGACAGAAGGCGATCCCCTACTCGGCGACAGTGGCCAAGTCGTCGTCGGA GCTACCCGTGAGCCATCAGAGCAGCCCTGGTGGCGCACACCATCTGTCTATTGGCTCATTGGGCCCTTTTTCCTC TTTAGCCTGGCTTTTGGAGGCATCTTGGTCCCCAAGCTCAATCTCATGCTCGAACTCGTCTGCCGCAAGCATCTC GCAGACAGGGCGCCCACAGTTCAATCATTATCCACGGTCCAGCCATGGGCAGCCCTTGTGGGCGGCGATGATCCG CAGTGCAAGGCGCCAGATATTCAACGTCGCGTAGCCACGCTGTCCTTGTTCATCAATCTAATCACTGGCGGCCTC AGTGCCGTCGTGGCGCCCAAGATTGGCCACTTTTCCGACGGCTACGGACGTCTAAGGCTGTTGGCACTGGCCTCT TGCGGCGGCCTGCTGGGCGAGCTAGTCACGGTCCTCGTGGCAAAGTTTCCCGACGCCATTGACTATCGCTGGCTC CTCCTCGGCGCAGTCTTTGACGGCATGGGCGGTTCCTTTACAACTGGCAGTATTCTCAGCCAGTCGTACACGAGC GACTGCACGCCTCCCTCTCGGCGGTCAGTCTCGGTGGGATATATCCAAGCCTGCCTCTTTAGCGGTCTGGCCCTT GGCCCCGTAATTGCCGGATACTTTGCCAAGTGGACGGGCAGCCTCTTGTCCGTCTTTTATGTCGTTGTTGTCTGC CACGCCCTGCTGATTCTCTTCTTGGGCCTGGTTGTGCCCGAGTCTGTTTCAAAGGACAACCGGCTCTTGGTCCGA CAACGATGGCGCAAGGAAAAGGAAGCTCGCGCCCTGGGTGTGGCGCCGTCATTTTCCAGTGCGCAGCAAAAGTGG AATCCCCTGGCTCCTCTGGCAATTCTCTGGCCAACGGGCCCCGGCACGTCGTCGAGACTGCGCGTCAACTTGCTG GCGCTGGCCATGTGCGACGCAACCATCATGGGGGGCGCGCTTGCTGCGACAGCCGTGGTGATTCTATACGCCGAG TACACCTTTAACTGGGGGAACCTCGAGACGTCTAGATTTGTGTCAGCCATGTCCCTGATGCGTGTCATGATTCTC ATGGGCATCTTCCCACTCGTCAATTACTTTGGGCGAGTACGGCCAAGGCGAGGTCGGGCGGCGACTCGCGACACC AACTCGGGCTCTGACAGGCTCGACGGCTGGCTCCTGTCCTTTGCCCTCTTGTGCGAGGTGCTGGGCTGCCTTGGC TACACGCTTGGCCGGACAGAGTCTCTCTTTTTTGGCAGCGGCTTCTTTACCGCCTTTGGAGCACTGGGCATGGCC ACCACGCAGGCTGCCCTGACCAAGCACGTCCCAGCAGAGCGCGTGGGTCAGGTGCTCGGCGCCGTGGGCATGTTG CACGCCCTGGCCAGGGTGATTGGGCCCGTGATATTCAGCGGCTTATATGCGGCGACGGTGGCAACCTTTCCGCAG GCCATTTTTGTCGCTCTTGGCGCCATGTATGGCATTGCGCTCATCATTAGCTTTGTCGTCCAGCCGGGTGTTCAT TGGGAGGGAGAGCACCAAGGTGGTACTGCAGATGCAGCCGACGTAGCCGTCAGTGGAGATCAGGTTTGCTTCTAG |
| Gene | >OphauB2|3870 ATGGCTTCTATGCAGAGACGGGGCGCGACAGAAGGCGATCCCCTACTCGGCGACAGTGGCCAAGTCGTCGTCGGA GCTACCCGTGAGCCATCAGAGCAGCCCTGGTGGCGCACACCATCTGTACGTAACAACAGCCGATACAACACCTTG CTAAAAGGGAAAAAAGCACTCAATGGTACAAACCTAGGTCTATTGGCTCATTGGGCCCTTTTTCCTCTTTAGCCT GGCTTTTGGAGGCATCTTGGTCCCCAAGCTCAATCTGTGGGAGGCTGTCCTGTCCACCACCCAAGGCCATGTGCT AATGAGGATTGTGCAATGCACAGCATGCTCGAACTCGTCTGCCGCAAGCATCTCGCAGACAGGGCGCCCACAGTT CAATCATTATCCACGGTCCAGCCATGGGCAGCCCTTGTGGGCGGCGATGATCCGCAGTGCAAGGCGCCAGATATT CAACGTCGCGTAGCCACGCTGTCCTTGTTCATCAATCTAATCACTGGCGGCCTCAGTGCCGTCGTGGCGCCCAAG ATTGGCCACTTTTCCGACGGCTACGGACGTCTAAGGCTGTTGGCACTGGCCTCTTGCGGCGGCCTGCTGGGCGAG CTAGTCACGGTCCTCGTGGCAAAGTTTCCCGACGCCATTGACTATCGCTGGCTCCTCCTCGGCGCAGTCTTTGAC GGCATGGGCGGTTCCTTTACAACTGGCAGTATTCTCAGCCAGTCGTACACGAGCGACTGCACGCCTCCCTCTCGG CGGTCAGTCTCGGTGGGATATATCCAAGCCTGCCTCTTTAGCGGTCTGGCCCTTGGCCCCGTAATTGCCGGATAC TTTGCCAAGTGGACGGGCAGCCTCTTGTCCGTCTTTTATGTCGTTGTTGTCTGCCACGCCCTGCTGATTCTCTTC TTGGGCCTGGTTGTGCCCGAGTCTGTTTCAAAGGACAACCGGCTCTTGGTCCGACAACGATGGCGCAAGGAAAAG GAAGCTCGCGCCCTGGGTGTGGCGCCGTCATTTTCCAGTGCGCAGCAAAAGTGGAATCCCCTGGCTCCTCTGGCA ATTCTCTGGCCAACGGGCCCCGGCACGTCGTCGAGACTGCGCGTCAACTTGCTGGCGCTGGCCATGTGCGACGCA ACCATCATGGGGGGCGCGCTTGCTGCGACAGCCGTGGTGATTCTATACGCCGAGTACACCTTTAACTGGGGGAAC CTCGAGACGTCTAGATTTGTGTCAGCCATGTCCCTGATGCGTGTCATGATTCTCATGGGCATCTTCCCACTCGTC AATTACTTTGGGCGAGTACGGCCAAGGCGAGGTCGGGCGGCGACTCGCGACACCAACTCGGGCTCTGACAGGCTC GACGGCTGGCTCCTGTCCTTTGCCCTCTTGTGCGAGGTGCTGGGCTGCCTTGGCTACACGCTTGGCCGGACAGAG TCTCTCTTTTTTGGCAGCGGCTTCTTTACCGCCTTTGGAGCACTGGGCATGGCCACCACGCAGGCTGCCCTGACC AAGCACGTCCCAGCAGAGCGCGTGGGTCAGGTGCTCGGCGCCGTGGGCATGTTGCACGCCCTGGCCAGGGTGATT GGGCCCGTGATATTCAGCGGCTTATATGCGGCGACGGTGGCAACCTTTCCGCAGGCCATTTTTGTCGCTCTTGGC GCCATGTATGGCATTGCGCTCATCATTAGCTTTGTCGTCCAGCCGGGTGGTAAGCTGAGCCCCGTGTTGCCTGTT TTGGATGCCATCAAGGAAATTGAATCAAAAGCTGACTGTGTGTGTGTTGTCAACCACTAGTTCATTGGGAGGGAG AGCACCAAGGTGGTACTGCAGATGCAGCCGACGTAGCCGTCAGTGGAGATCAGGTTTGCTTCTAG |