© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | OphauB2|3861 |
| Gene name | |
| Location | Contig_25:11158..13043 |
| Strand | + |
| Gene length (bp) | 1885 |
| Transcript length (bp) | 1506 |
| Coding sequence length (bp) | 1506 |
| Protein length (aa) | 502 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.8E-14 | 84 | 428 |
| PF05978 | UNC-93 | Ion channel regulatory protein UNC-93 | 1.7E-12 | 84 | 337 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9URX1|YLX5_SCHPO | UNC93-like protein C922.05c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC922.05c PE=3 SV=1 | 5 | 501 | 2.0E-150 |
| sp|Q8LG53|UN932_ARATH | UNC93-like protein 2 OS=Arabidopsis thaliana GN=At1g18010 PE=2 SV=2 | 33 | 467 | 1.0E-102 |
| sp|Q56WD3|UN931_ARATH | UNC93-like protein 1 OS=Arabidopsis thaliana GN=At1g18000 PE=2 SV=2 | 33 | 467 | 1.0E-102 |
| sp|O14237|YEL4_SCHPO | Uncharacterized membrane protein C6F6.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC6F6.04c PE=4 SV=1 | 42 | 481 | 4.0E-49 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0051179 | localization | No |
| GO:0005215 | transporter activity | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 51 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 49 | 71 | 22 |
| 2 | 84 | 101 | 17 |
| 3 | 106 | 128 | 22 |
| 4 | 135 | 157 | 22 |
| 5 | 172 | 191 | 19 |
| 6 | 204 | 223 | 19 |
| 7 | 261 | 278 | 17 |
| 8 | 298 | 320 | 22 |
| 9 | 330 | 347 | 17 |
| 10 | 382 | 404 | 22 |
| 11 | 442 | 464 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|3861 MSVQDSKPAMSQAATAIAPGIQESSWLYKPLGRGTRSTWYFASPKVQLLMVSLVCFLCPGMFNSLTGLGGGGQVD ATAQDRASVALYSTFAVVGFFAGTFANRLGLRLTLSIGGVGYCVYAASFLSYSHTRNQGFVIFAGAFLGVCAGLL WTAQGAIMMAYPPENSKGRYISWFWSIFNLGAVIGSIIPLAQNAQNKSGAVTDGTYVAFIVLMFLGACLALFICD ADKVVRADGSKVIVMKNPSWVSEFIGLGQTLVREPWILLLFPMFFSSNFFYTYQNNAMNLAHFTMRARTLNNLLY WLAQIICAAMLGYCLDIASLRRSLRAKLSFGFLFTLTFVIWGGGWAWQKDQVAREVTATAQYKENDLVDWNDGGR RFIGPMFLYFFYGFYDSAFQVCMFWYLGALSNSGRKAAIYMGFAKGVQSVGAACSWALDGEKKPYNVIFGLTWAL VGFSLICAAPVIFLKIKDHVSVEEDLKFSDETLEDVVAVPVDEKKTIGPQV* |
| Coding | >OphauB2|3861 ATGTCGGTGCAGGACAGCAAGCCCGCCATGTCGCAAGCCGCCACGGCCATTGCGCCAGGGATCCAAGAATCAAGC TGGCTCTACAAGCCGCTTGGCCGCGGAACGCGCTCAACATGGTACTTTGCCTCGCCCAAGGTACAACTCCTCATG GTGTCGCTCGTCTGCTTCCTCTGCCCGGGCATGTTCAACTCGCTCACCGGGCTGGGCGGCGGGGGCCAAGTGGAC GCAACGGCGCAGGACAGGGCGTCGGTGGCGCTCTACTCAACCTTTGCCGTGGTGGGCTTTTTTGCCGGCACGTTT GCTAACCGGCTGGGCTTGCGGCTGACGCTGTCGATTGGGGGCGTGGGGTATTGCGTCTACGCGGCGTCGTTTTTG TCCTATTCGCATACGCGGAACCAGGGCTTTGTGATTTTTGCGGGGGCCTTTCTCGGCGTGTGTGCTGGGTTGTTG TGGACGGCGCAGGGGGCAATCATGATGGCGTATCCGCCAGAGAATAGCAAGGGGCGATATATTTCGTGGTTTTGG TCCATTTTCAACCTGGGTGCCGTTATTGGCTCCATAATTCCCCTGGCGCAAAATGCCCAAAACAAATCTGGCGCC GTCACCGATGGCACCTATGTCGCCTTCATCGTCCTCATGTTTCTCGGCGCTTGCCTCGCCCTCTTCATCTGCGAC GCCGACAAGGTTGTCCGCGCCGACGGCTCCAAAGTCATCGTCATGAAGAATCCCTCGTGGGTCAGCGAATTCATT GGCCTCGGCCAGACCCTTGTCCGCGAGCCCTGGATCCTCTTGCTCTTCCCCATGTTCTTCTCGTCCAACTTCTTC TACACGTACCAAAACAACGCCATGAACCTGGCCCATTTTACCATGCGCGCCAGGACCCTCAACAACTTGCTCTAC TGGCTGGCGCAGATTATCTGCGCTGCCATGCTGGGCTATTGCTTGGATATTGCCAGTCTGCGCCGCAGTCTGCGC GCAAAGCTGTCCTTTGGCTTTCTCTTTACCTTGACCTTTGTCATTTGGGGAGGCGGCTGGGCCTGGCAAAAGGAT CAGGTGGCTAGAGAGGTTACCGCCACGGCCCAGTACAAGGAGAATGACTTGGTGGATTGGAATGATGGGGGGAGG CGCTTCATTGGGCCCATGTTTCTCTACTTTTTCTATGGCTTTTACGACAGCGCCTTTCAGGTGTGCATGTTTTGG TATCTAGGAGCCCTGTCCAACTCGGGCCGCAAAGCTGCCATTTACATGGGCTTCGCCAAGGGCGTCCAGAGCGTC GGCGCAGCGTGCTCATGGGCCCTCGACGGCGAAAAGAAGCCCTACAATGTCATTTTTGGCCTCACCTGGGCCCTC GTTGGCTTCTCCCTCATTTGCGCCGCGCCCGTCATTTTTCTCAAAATCAAGGACCACGTTAGTGTCGAGGAGGAT CTCAAGTTTAGCGATGAGACGCTCGAGGATGTTGTGGCGGTGCCGGTGGATGAGAAGAAGACGATTGGGCCTCAG GTGTAG |
| Transcript | >OphauB2|3861 ATGTCGGTGCAGGACAGCAAGCCCGCCATGTCGCAAGCCGCCACGGCCATTGCGCCAGGGATCCAAGAATCAAGC TGGCTCTACAAGCCGCTTGGCCGCGGAACGCGCTCAACATGGTACTTTGCCTCGCCCAAGGTACAACTCCTCATG GTGTCGCTCGTCTGCTTCCTCTGCCCGGGCATGTTCAACTCGCTCACCGGGCTGGGCGGCGGGGGCCAAGTGGAC GCAACGGCGCAGGACAGGGCGTCGGTGGCGCTCTACTCAACCTTTGCCGTGGTGGGCTTTTTTGCCGGCACGTTT GCTAACCGGCTGGGCTTGCGGCTGACGCTGTCGATTGGGGGCGTGGGGTATTGCGTCTACGCGGCGTCGTTTTTG TCCTATTCGCATACGCGGAACCAGGGCTTTGTGATTTTTGCGGGGGCCTTTCTCGGCGTGTGTGCTGGGTTGTTG TGGACGGCGCAGGGGGCAATCATGATGGCGTATCCGCCAGAGAATAGCAAGGGGCGATATATTTCGTGGTTTTGG TCCATTTTCAACCTGGGTGCCGTTATTGGCTCCATAATTCCCCTGGCGCAAAATGCCCAAAACAAATCTGGCGCC GTCACCGATGGCACCTATGTCGCCTTCATCGTCCTCATGTTTCTCGGCGCTTGCCTCGCCCTCTTCATCTGCGAC GCCGACAAGGTTGTCCGCGCCGACGGCTCCAAAGTCATCGTCATGAAGAATCCCTCGTGGGTCAGCGAATTCATT GGCCTCGGCCAGACCCTTGTCCGCGAGCCCTGGATCCTCTTGCTCTTCCCCATGTTCTTCTCGTCCAACTTCTTC TACACGTACCAAAACAACGCCATGAACCTGGCCCATTTTACCATGCGCGCCAGGACCCTCAACAACTTGCTCTAC TGGCTGGCGCAGATTATCTGCGCTGCCATGCTGGGCTATTGCTTGGATATTGCCAGTCTGCGCCGCAGTCTGCGC GCAAAGCTGTCCTTTGGCTTTCTCTTTACCTTGACCTTTGTCATTTGGGGAGGCGGCTGGGCCTGGCAAAAGGAT CAGGTGGCTAGAGAGGTTACCGCCACGGCCCAGTACAAGGAGAATGACTTGGTGGATTGGAATGATGGGGGGAGG CGCTTCATTGGGCCCATGTTTCTCTACTTTTTCTATGGCTTTTACGACAGCGCCTTTCAGGTGTGCATGTTTTGG TATCTAGGAGCCCTGTCCAACTCGGGCCGCAAAGCTGCCATTTACATGGGCTTCGCCAAGGGCGTCCAGAGCGTC GGCGCAGCGTGCTCATGGGCCCTCGACGGCGAAAAGAAGCCCTACAATGTCATTTTTGGCCTCACCTGGGCCCTC GTTGGCTTCTCCCTCATTTGCGCCGCGCCCGTCATTTTTCTCAAAATCAAGGACCACGTTAGTGTCGAGGAGGAT CTCAAGTTTAGCGATGAGACGCTCGAGGATGTTGTGGCGGTGCCGGTGGATGAGAAGAAGACGATTGGGCCTCAG GTGTAG |
| Gene | >OphauB2|3861 ATGTCGGTGCAGGACAGCAAGCCCGCCATGTCGCAAGCCGCCACGGCCATTGCGCCAGGGATCCAAGAATCAAGC TGGCTCTACAAGCCGCTTGGCCGCGGAACGCGCTCAACATGGTACTTTGCCTCGCCCAAGGTACAACTCCTCATG GTGTCGCTCGTCTGCTTCCTCTGCCCGGGCATGTTCAACTCGCTCACCGGGCTGGGCGGCGGGGGCCAAGTGGAC GCAACGGCGCAGGACAGGGCGTCGGTGGCGCTCTACTCAACCTTTGCCGTGGTGGGCTTTTTTGCCGGCACGTTT GCTAACCGGCTGGGCTTGCGGCTGACGCTGTCGATTGGGGGCGTGGGGTATTGCGTCTACGCGGCGTCGTTTTTG TCCTATTCGCATACGCGGAACCAGGGCTTTGTGATTTTTGCGGGGGCCTTTCTCGGCGTGTGTGCTGGGTTGTTG TGGACGGCGCAGGGGGCAATCATGATGGCGTATCCGCCAGAGAATAGCAAGGGGCGATATATTTCGTGGTTTTGG TCCATTTTCAACCTGGGTGCCGTTATTGGCTCCATAGTGAGTCGAGCTACTTTTTTTTACCTACCCTTGACCCCT CCTCCCTTTTCTTTTTCTTTTTTCCCCTGCCGCCTCGTCTTGTCCTCTCTCGACTGGCACCCGTTTTCGACTTGT GCTCGGCACGGCCATGGTGAAAGCACGGCATGGCTAACAAAGACCCTCTCTAGATTCCCCTGGCGCAAAATGCCC AAAACAAATCTGGCGCCGTCACCGATGGCACCTATGTCGCCTTCATCGTCCTCATGTTTCTCGGCGCTTGCCTCG CCCTCTTCATCTGCGACGCCGACAAGGTTGTCCGCGCCGACGGCTCCAAAGTCATCGTCATGAAGAATCCCTCGT GGGTCAGCGAATTCATTGGCCTCGGCCAGACCCTTGTCCGCGAGCCCTGGATCCTCTTGCTCTTCCCCATGTTCT TCTCGTCCAACTTCTTCTACACGTACCAAAACAACGCCATGAACCTGGCCCATTTTACCATGCGCGCCAGGACCC TCAACAACTTGCTCTACTGGCTGGCGCAGATTATCTGCGCTGCCATGCTGGGCTATTGCTTGGATATTGCCAGTC TGCGCCGCAGTCTGCGCGCAAAGCTGTCCTTTGGCTTTCTCTTTACCTTGACCTTTGTCATTTGGGGAGGCGGCT GGGCCTGGCAAAAGGATCAGGTGGCTAGAGAGGTTACCGCCACGGCCCAGTACAAGGAGAATGACTTGGTGGATT GGAATGATGGGGGGAGGCGCTTCATTGGGCCCATGTTTCTCTACTTTTTCTATGGCTTTTACGACAGCGCCTTTC AGGTGTGCATGTTTTGGTCAGTCTCTCTCTCTTTTTTTCCCCCTCTTGGCTCCCCTCTTGGCTCCCCTCTTTACT CCCCTCTTCTTCCTGTCCAGCAAGACTTGGGCTGACGCGTGGCTGCTGCCTACAGGTATCTAGGAGCCCTGTCCA ACTCGGGCCGCAAAGCTGCCATTTACATGGGTAAGTCTAGCTCCCCTTGTCCAACACCCTTTTCTATGCCCCCCC CCCCCCTCTCTCTGCAACTACCCAAGACGTCCCAACTGACTCGCCACAAACAGGCTTCGCCAAGGGCGTCCAGAG CGTCGGCGCAGCGTGCTCATGGGCCCTCGACGGCGAAAAGAAGCCCTACAATGTCATTTTTGGCCTCACCTGGGC CCTCGTTGGCTTCTCCCTCATTTGCGCCGCGCCCGTCATTTTTCTCAAAATCAAGGACCACGTTAGTGTCGAGGA GGATCTCAAGTTTAGCGATGAGACGCTCGAGGATGTTGTGGCGGTGCCGGTGGATGAGAAGAAGACGATTGGGCC TCAGGTGTAG |