Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|386
Gene name
LocationContig_104:20927..21428
Strand+
Gene length (bp)501
Transcript length (bp)351
Coding sequence length (bp)351
Protein length (aa) 117

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00545 Ribonuclease ribonuclease 4.7E-09 27 109

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|D4AVI0|RNF1_ARTBC Extracellular guanyl-specific ribonuclease ARB_00194 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_00194 PE=1 SV=1 9 116 2.0E-40
sp|P10282|RNF1_GIBFU Guanyl-specific ribonuclease F1 OS=Gibberella fujikuroi PE=1 SV=4 9 116 3.0E-38
sp|P26875|RNT1_TRIHA Guanyl-specific ribonuclease Th1 OS=Trichoderma harzianum PE=1 SV=1 14 115 2.0E-36
sp|P16411|RNF1_GIBBA Extracellular guanyl-specific ribonuclease Fl1 OS=Gibberella baccata PE=1 SV=1 12 115 6.0E-34
sp|P16412|RNF2_GIBBA Extracellular guanyl-specific ribonuclease Fl2 OS=Gibberella baccata PE=1 SV=2 9 115 2.0E-33
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|D4AVI0|RNF1_ARTBC Extracellular guanyl-specific ribonuclease ARB_00194 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_00194 PE=1 SV=1 9 116 2.0E-40
sp|P10282|RNF1_GIBFU Guanyl-specific ribonuclease F1 OS=Gibberella fujikuroi PE=1 SV=4 9 116 3.0E-38
sp|P26875|RNT1_TRIHA Guanyl-specific ribonuclease Th1 OS=Trichoderma harzianum PE=1 SV=1 14 115 2.0E-36
sp|P16411|RNF1_GIBBA Extracellular guanyl-specific ribonuclease Fl1 OS=Gibberella baccata PE=1 SV=1 12 115 6.0E-34
sp|P16412|RNF2_GIBBA Extracellular guanyl-specific ribonuclease Fl2 OS=Gibberella baccata PE=1 SV=2 9 115 2.0E-33
sp|P00651|RNT1_ASPOR Guanyl-specific ribonuclease T1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=rntA PE=1 SV=2 6 113 1.0E-29
sp|P00652|RNC2_ASPCL Guanyl-specific ribonuclease C2 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=ACLA_055300 PE=1 SV=2 14 114 9.0E-28
sp|P09646|RNN1_NEUCR Guanyl-specific ribonuclease N1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=grn PE=1 SV=2 14 113 5.0E-27
sp|Q7M515|RNA1_ASPPL Guanyl-specific ribonuclease Ap1 OS=Aspergillus pallidus PE=1 SV=1 14 112 2.0E-26
sp|P09647|RNPC_PENCH Guanyl-specific ribonuclease Pc OS=Penicillium chrysogenum PE=1 SV=1 14 112 7.0E-23
sp|P07446|RNPB_PENBR Guanyl-specific ribonuclease Pb1 OS=Penicillium brevicompactum PE=1 SV=1 44 113 2.0E-22
sp|P00653|RNMS_ASPPH Guanyl-specific ribonuclease Ms OS=Aspergillus phoenicis PE=1 SV=2 11 115 3.0E-20
sp|P07736|RNU1_USTSP Guanyl-specific ribonuclease U1 OS=Ustilago sphaerogena PE=1 SV=2 11 113 1.0E-18
sp|P81762|RNPO_PLEOS Guanyl-specific ribonuclease Po1 OS=Pleurotus ostreatus PE=1 SV=1 35 112 4.0E-16
sp|P00654|RNU2_USTSP Ribonuclease U2 OS=Ustilago sphaerogena GN=RNU2 PE=1 SV=4 10 104 3.0E-08
[Show less]

GO

GO Term Description Terminal node
GO:0003723 RNA binding Yes
GO:0004521 endoribonuclease activity Yes
GO:0003824 catalytic activity No
GO:0016788 hydrolase activity, acting on ester bonds No
GO:0003674 molecular_function No
GO:0004540 ribonuclease activity No
GO:0016787 hydrolase activity No
GO:0005488 binding No
GO:1901363 heterocyclic compound binding No
GO:0004518 nuclease activity No
GO:0140640 catalytic activity, acting on a nucleic acid No
GO:0140098 catalytic activity, acting on RNA No
GO:0097159 organic cyclic compound binding No
GO:0003676 nucleic acid binding No
GO:0004519 endonuclease activity No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup2614
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2503
Ophiocordyceps australis map64 (Brazil) OphauB2|386 (this protein)
Ophiocordyceps camponoti-floridani Ophcf2|05146
Ophiocordyceps camponoti-rufipedis Ophun1|3980
Ophiocordyceps kimflemingae Ophio5|135
Ophiocordyceps subramaniannii Hirsu2|3980

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|386
MPTAQLVARRETQCGKTQYSADYIGQAAQTACQYVRQGDSAGSSSYPHQYKNYEGFEFEGLPGPFFEFPILSSGE
VYAGGRPGPDRIVIDEDCREAGEITHTGADGNSFIGCSGTN*
Coding >OphauB2|386
ATGCCCACGGCGCAGCTCGTTGCTCGCCGCGAGACACAGTGTGGCAAGACGCAGTACTCGGCCGACTATATCGGG
CAGGCTGCTCAGACTGCTTGCCAGTACGTCAGACAAGGCGACAGCGCGGGCTCTTCGTCGTATCCGCATCAGTAC
AAAAATTATGAGGGCTTTGAGTTTGAGGGTCTGCCCGGCCCGTTTTTCGAGTTTCCCATTTTGTCTTCGGGCGAG
GTTTATGCGGGCGGCCGGCCTGGGCCTGATCGTATAGTCATTGATGAGGATTGTCGGGAGGCGGGCGAAATTACT
CACACGGGCGCCGACGGTAACAGCTTTATCGGCTGCTCAGGGACCAACTAG
Transcript >OphauB2|386
ATGCCCACGGCGCAGCTCGTTGCTCGCCGCGAGACACAGTGTGGCAAGACGCAGTACTCGGCCGACTATATCGGG
CAGGCTGCTCAGACTGCTTGCCAGTACGTCAGACAAGGCGACAGCGCGGGCTCTTCGTCGTATCCGCATCAGTAC
AAAAATTATGAGGGCTTTGAGTTTGAGGGTCTGCCCGGCCCGTTTTTCGAGTTTCCCATTTTGTCTTCGGGCGAG
GTTTATGCGGGCGGCCGGCCTGGGCCTGATCGTATAGTCATTGATGAGGATTGTCGGGAGGCGGGCGAAATTACT
CACACGGGCGCCGACGGTAACAGCTTTATCGGCTGCTCAGGGACCAACTAG
Gene >OphauB2|386
ATGCCCACGGCGCAGCTCGTTGCTCGCCGCGAGACACAGTGTGGCAAGACGCAGTACTCGGCCGACTATATCGGG
CAGGCTGCTCAGACTGCTTGCCAGTACGTCAGACAAGGCGACAGCGCGGGCTCTTCGTCGTATCCGCATCAGTAC
AAAAATTATGAGGGCTTTGAGTTTGAGGGTCTGCCCGGCCCGTTTTTCGAGTTTCCCATTTTGTCTTCGGGCGAG
GTTTATGCGGGCGGTATGTTTTTCATCTTGCGTCTATCCGTCTTTTTTTCTTTCTTTTTTTTCCCTTTTACCGCT
TCTTCTTTTTATTTTTATTTTTTTGACAATTTATTCACTGACCGACTTGGTTGGCTGATTTGGGCTTTTTTTTAA
AACTTGGTTCCAGGCCGGCCTGGGCCTGATCGTATAGTCATTGATGAGGATTGTCGGGAGGCGGGCGAAATTACT
CACACGGGCGCCGACGGTAACAGCTTTATCGGCTGCTCAGGGACCAACTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail