Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|3855
Gene name
LocationContig_249:2851..5540
Strand-
Gene length (bp)2689
Transcript length (bp)1485
Coding sequence length (bp)1485
Protein length (aa) 495

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13520 AA_permease_2 Amino acid permease 4.4E-45 44 466
PF00324 AA_permease Amino acid permease 1.2E-07 39 476

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|P19807|HNM1_YEAST Choline transport protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HNM1 PE=1 SV=1 1 483 2.0E-64
sp|O60113|YG64_SCHPO Uncharacterized amino-acid permease C15C4.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC15C4.04c PE=3 SV=1 6 494 2.0E-54
sp|Q9ZU50|BAT1_ARATH Amino-acid permease BAT1 OS=Arabidopsis thaliana GN=BAT1 PE=2 SV=2 6 490 3.0E-47
sp|O59942|AAP2_NEUCR Amino-acid permease 2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=aap-2 PE=2 SV=2 11 492 4.0E-47
sp|Q10087|YAO8_SCHPO Uncharacterized amino-acid permease C11D3.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.08c PE=3 SV=1 8 494 7.0E-38
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|P19807|HNM1_YEAST Choline transport protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HNM1 PE=1 SV=1 1 483 2.0E-64
sp|O60113|YG64_SCHPO Uncharacterized amino-acid permease C15C4.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC15C4.04c PE=3 SV=1 6 494 2.0E-54
sp|Q9ZU50|BAT1_ARATH Amino-acid permease BAT1 OS=Arabidopsis thaliana GN=BAT1 PE=2 SV=2 6 490 3.0E-47
sp|O59942|AAP2_NEUCR Amino-acid permease 2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=aap-2 PE=2 SV=2 11 492 4.0E-47
sp|Q10087|YAO8_SCHPO Uncharacterized amino-acid permease C11D3.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.08c PE=3 SV=1 8 494 7.0E-38
sp|O74537|YCQ4_SCHPO Uncharacterized amino-acid permease C74.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC74.04 PE=3 SV=1 5 490 1.0E-36
sp|B9EXZ6|BAT1_ORYSJ Amino-acid permease BAT1 homolog OS=Oryza sativa subsp. japonica GN=BAT1 PE=2 SV=1 13 490 3.0E-36
sp|Q9US40|YFZ1_SCHPO Uncharacterized amino-acid permease C1039.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.01 PE=3 SV=1 7 486 1.0E-35
sp|Q09887|YC9D_SCHPO Uncharacterized amino-acid permease C584.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC584.13 PE=3 SV=1 2 490 7.0E-34
sp|Q9C0Z0|YKM2_SCHPO Uncharacterized amino-acid permease PB24D3.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB24D3.02c PE=3 SV=1 9 492 2.0E-31
sp|P32837|UGA4_YEAST GABA-specific permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UGA4 PE=1 SV=1 9 459 1.0E-28
sp|O74248|GPT1_CANAX Putative polyamine transporter OS=Candida albicans GN=GPT1 PE=3 SV=1 4 492 1.0E-27
sp|P53744|BIO5_YEAST 7-keto 8-aminopelargonic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BIO5 PE=1 SV=1 7 459 1.0E-23
sp|P36029|TPO5_YEAST Polyamine transporter TPO5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPO5 PE=1 SV=1 45 489 1.0E-22
sp|Q9UT18|THI9_SCHPO Thiamine transporter thi9 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=thi9 PE=1 SV=1 5 461 5.0E-21
sp|O59813|YCT3_SCHPO Uncharacterized amino-acid permease C794.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC794.03 PE=2 SV=1 8 476 4.0E-20
[Show less]

GO

GO Term Description Terminal node
GO:0055085 transmembrane transport Yes
GO:0016020 membrane Yes
GO:0022857 transmembrane transporter activity Yes
GO:0110165 cellular anatomical entity No
GO:0009987 cellular process No
GO:0003674 molecular_function No
GO:0051179 localization No
GO:0005215 transporter activity No
GO:0008150 biological_process No
GO:0051234 establishment of localization No
GO:0005575 cellular_component No
GO:0006810 transport No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 50 0.5

Transmembrane Domains

Domain # Start End Length
1 35 57 22
2 97 119 22
3 134 156 22
4 163 185 22
5 205 227 22
6 257 279 22
7 307 329 22
8 356 378 22
9 388 410 22
10 423 445 22
11 455 477 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|3855
MKPETVEREDDEQLAAMGHEPELKRNFSTLSMLGLAFAVLNSWTGLITAGICNVCIAASLAEFLSAYPTAGGQYH
WVAVSWPKWMPILAWITGWINVAGWIALVATNVLLSSQLILGIIACLHPEYESHSWHQFLLYIGLTMVVFTMNAF
LNSLLPLVYRGAFLWSMGGFVVVSITVLACASPNYNSASFVFWGFNNATGWPDGVAWLLGLLQGGLGVTAFDAVV
HMIEGIYAHCLGGGALLMPPEIPQAARQGPRIMVWSVCIGTMTGAMFLAILLLVSGDIQDVIASPAGPLLQILLD
ATHSRVGAICLLMLPLVCLFFATLSAMTISSRMVFAFARDRGLPWSRVLARVDVRLGLPLNALALTCVVVILFGM
IFLASTSAFNAIMSASIVALNLSYAMPIAVNCAQGRKVLAQASWRLPAWLGWTADAIALCYVLLTTVLFLFPPKL
PVTGTNMNYCIGAFVIIVMVSVLQWLMDGRKHFTGPLVNVTRPS*
Coding >OphauB2|3855
ATGAAGCCGGAAACGGTGGAGCGTGAAGACGATGAGCAGCTTGCAGCCATGGGCCACGAGCCAGAGCTCAAGCGC
AACTTTTCCACACTATCTATGCTCGGGTTGGCTTTTGCAGTCTTGAATTCGTGGACCGGTCTGATTACCGCGGGC
ATCTGCAACGTGTGCATAGCGGCGTCTCTGGCCGAGTTTTTGTCTGCTTATCCAACCGCTGGAGGCCAATATCAT
TGGGTTGCTGTATCATGGCCGAAATGGATGCCGATTCTGGCTTGGATAACAGGCTGGATCAATGTTGCCGGATGG
ATTGCTCTCGTTGCTACAAACGTGCTCCTATCTAGCCAGCTTATTCTGGGCATTATAGCTTGTCTACATCCGGAG
TACGAGTCTCACAGCTGGCACCAGTTTCTCCTTTACATTGGCTTGACCATGGTCGTCTTTACCATGAATGCCTTT
CTCAACTCGCTCTTGCCTCTGGTCTATCGCGGGGCGTTTTTATGGTCCATGGGCGGCTTCGTGGTTGTTTCGATT
ACGGTGCTTGCGTGCGCGAGCCCAAACTACAACTCTGCGAGTTTTGTCTTTTGGGGCTTCAACAATGCAACCGGG
TGGCCCGATGGCGTCGCCTGGCTTTTGGGGCTTCTACAAGGAGGCCTGGGAGTAACTGCATTTGATGCCGTGGTA
CACATGATTGAAGGTATATATGCCCATTGTCTCGGTGGTGGAGCCCTGCTTATGCCGCCAGAGATTCCACAGGCA
GCACGGCAAGGCCCCAGAATCATGGTGTGGAGCGTGTGCATCGGCACCATGACGGGGGCCATGTTCCTGGCCATT
CTGCTCTTGGTCTCTGGCGACATTCAAGACGTGATTGCGTCACCTGCCGGGCCGCTTTTACAGATTCTGCTCGAT
GCAACGCATAGCCGCGTTGGTGCCATTTGCTTGCTCATGCTGCCCCTGGTCTGTCTCTTTTTTGCTACCTTGAGC
GCCATGACGATTAGCAGCCGCATGGTGTTTGCATTCGCACGAGATCGAGGCCTGCCGTGGTCGCGCGTCCTGGCC
CGGGTTGATGTGCGGCTGGGCCTGCCTCTGAATGCGCTGGCTCTGACCTGCGTCGTCGTGATACTCTTTGGCATG
ATATTCCTGGCGTCGACAAGTGCCTTTAATGCCATCATGTCGGCCTCGATTGTGGCTCTCAATCTTTCCTACGCC
ATGCCCATTGCCGTCAACTGTGCCCAGGGACGCAAAGTACTGGCCCAGGCTTCCTGGCGTCTACCAGCGTGGCTT
GGCTGGACGGCAGATGCCATTGCCCTGTGCTACGTGCTGCTCACCACGGTTCTCTTTCTCTTCCCGCCAAAGCTG
CCTGTGACAGGCACAAACATGAACTACTGCATCGGCGCCTTTGTCATAATCGTCATGGTGTCCGTCTTGCAATGG
CTGATGGACGGACGCAAGCACTTTACCGGCCCCCTTGTCAATGTCACAAGGCCTAGCTAA
Transcript >OphauB2|3855
ATGAAGCCGGAAACGGTGGAGCGTGAAGACGATGAGCAGCTTGCAGCCATGGGCCACGAGCCAGAGCTCAAGCGC
AACTTTTCCACACTATCTATGCTCGGGTTGGCTTTTGCAGTCTTGAATTCGTGGACCGGTCTGATTACCGCGGGC
ATCTGCAACGTGTGCATAGCGGCGTCTCTGGCCGAGTTTTTGTCTGCTTATCCAACCGCTGGAGGCCAATATCAT
TGGGTTGCTGTATCATGGCCGAAATGGATGCCGATTCTGGCTTGGATAACAGGCTGGATCAATGTTGCCGGATGG
ATTGCTCTCGTTGCTACAAACGTGCTCCTATCTAGCCAGCTTATTCTGGGCATTATAGCTTGTCTACATCCGGAG
TACGAGTCTCACAGCTGGCACCAGTTTCTCCTTTACATTGGCTTGACCATGGTCGTCTTTACCATGAATGCCTTT
CTCAACTCGCTCTTGCCTCTGGTCTATCGCGGGGCGTTTTTATGGTCCATGGGCGGCTTCGTGGTTGTTTCGATT
ACGGTGCTTGCGTGCGCGAGCCCAAACTACAACTCTGCGAGTTTTGTCTTTTGGGGCTTCAACAATGCAACCGGG
TGGCCCGATGGCGTCGCCTGGCTTTTGGGGCTTCTACAAGGAGGCCTGGGAGTAACTGCATTTGATGCCGTGGTA
CACATGATTGAAGGTATATATGCCCATTGTCTCGGTGGTGGAGCCCTGCTTATGCCGCCAGAGATTCCACAGGCA
GCACGGCAAGGCCCCAGAATCATGGTGTGGAGCGTGTGCATCGGCACCATGACGGGGGCCATGTTCCTGGCCATT
CTGCTCTTGGTCTCTGGCGACATTCAAGACGTGATTGCGTCACCTGCCGGGCCGCTTTTACAGATTCTGCTCGAT
GCAACGCATAGCCGCGTTGGTGCCATTTGCTTGCTCATGCTGCCCCTGGTCTGTCTCTTTTTTGCTACCTTGAGC
GCCATGACGATTAGCAGCCGCATGGTGTTTGCATTCGCACGAGATCGAGGCCTGCCGTGGTCGCGCGTCCTGGCC
CGGGTTGATGTGCGGCTGGGCCTGCCTCTGAATGCGCTGGCTCTGACCTGCGTCGTCGTGATACTCTTTGGCATG
ATATTCCTGGCGTCGACAAGTGCCTTTAATGCCATCATGTCGGCCTCGATTGTGGCTCTCAATCTTTCCTACGCC
ATGCCCATTGCCGTCAACTGTGCCCAGGGACGCAAAGTACTGGCCCAGGCTTCCTGGCGTCTACCAGCGTGGCTT
GGCTGGACGGCAGATGCCATTGCCCTGTGCTACGTGCTGCTCACCACGGTTCTCTTTCTCTTCCCGCCAAAGCTG
CCTGTGACAGGCACAAACATGAACTACTGCATCGGCGCCTTTGTCATAATCGTCATGGTGTCCGTCTTGCAATGG
CTGATGGACGGACGCAAGCACTTTACCGGCCCCCTTGTCAATGTCACAAGGCCTAGCTAA
Gene >OphauB2|3855
ATGAAGCCGGAAACGGTGGAGCGTGAAGACGATGAGCAGCTTGCAGCCATGGGCCACGAGCCAGAGCTCAAGCGC
AACTTTTCCACACTGTTAGCAAGCCTCTTTTTAACAACCAAAAAAGAAAAAAAAAGAAAAAAAAAAAGAAAAGGA
GCACTGATTCGTGCCCTGCATGTACACGCGTCTGCCATGGGAACAACGCCACTAAAATATTCTGCCGTCTAGATC
TATGCTCGGGTTGGCTTTTGCAGTCTTGAATGTGCGCCATGCGAGCCATTTACCCAAACGGGGCAGTGAGGGTGC
TGACGCCTTGTCACAAAGTCGTGGACCGGTCTGTCAGCAAGCTTGTCCATTGGTTTGACGTCTGGGGGTAGCACA
AGCATCTTTTGGGGTTTGTGTTTTTTTTTATTCCTTTTTTTTATTCTTTTTTTTTTGTGTTTTTCCACCCTTGAA
TTGAAAGATTTTTTTTTTCATGTGCTTGCGAGTTCAATGTGTTAATGCTGTCGGATACCAGGTCTGATTACCGCG
GGCATCTGCAACGTGTGCATAGCGGCGTCTCTGGCCGAGTTTTTGTCTGCTTATCCAACGTATGATCAAGGCTGC
TTCCAAGTCTCTCTTATCCATGCTGACCGACGGGTTGGTGTAGCGCTGGAGGCCAATATCATTGGGTTGCTGGTG
AGTCTGGTTGTCGACAAGACATTGACTGCATTTTGCTAATACATCACGTCTGGCAGTCGGTGCGTCTAGGCCACT
CCTCTACCCGAGATCCGCCATGAATAGCCTGAGAATACTGATGCTGGGCAACTTGTAGTATCATGGCCGAAATGG
ATGCCGATTCTGGCTTGGATAACAGGCTGGATCAATGTTGCCGGATGGGTTCAAGCACCCTTTACTATTCCTTGC
TCTTTTTTTTTTTTTTTTTTTGCCTTGTCCAGAAACTCATCTAACCGTGGCTTGTTTGCAGATTGCTCTCGTTGC
TACAAACGTGCTCCTATCTAGCCAGCTTATTCTGGGCATTATAGCTTGTCTACATCCGGTACCTTTTTAAACTCG
ACCCGTCTAAGCTCTGGCTGACGATGCAACTGGCAGGAGTACGAGTCTCACAGCTGGCACCAGTTTCTCCTTTAC
ATTGGCTTGACCATGGTCGTCTTTACCATGAATGCCTTTCTCAACTCGCTCTTGCCTCTGGTCTATCGCGGGGCG
TTTTTATGGTCCATGGGCGGCTTCGTGGTTGTTTCGATTACGGTGCTTGCGTGCGCGAGCCCAAACTACAACTCT
GCGAGTTTTGTCTTTTGGGGCTTCAACAATGCAACCGGGTGTGCGTCTGTCGAGGATATCGCGTCGGGCGTGTCT
AGTGCTGGGACTGACGCGTCAATCTGCATAGGGCCCGATGGCGTCGCCTGGCTTTTGGGGGTAAGTCGAGGTTAT
AGACTTGGCGATGCAACTTGCTTCTGCGGCTTTGAAAACAAGTGTAAAATACTAAGACAAGACTCTATGCAGCTT
CTACAAGGAGGCCTGGGAGTAACTGCATTTGTAAGTGTCTGCCACCTTGTCAGGATGCTGGGGGGCAGAGCTCAT
CAAAGGCTTCTTCAGGATGCCGTGGTACACATGATTGAAGGTATATATGCCCATTGTCTCGGTGGTGGAGCCCTG
CTTATGCCGCCAGAGATTCCACAGGCAGCACGGCAAGGCCCCAGAATCATGGTGTGGAGCGTGTGCATCGGCACC
ATGACGGGGGCCATGTTCCTGGCCATTCTGCTCTTGGTCTCTGGCGACATTCAAGACGTGATTGCGTCACCTGCC
GGGCCGCTTTTACAGATTCTGCTCGATGCAACGCATAGCCGCGTTGGTGCCATTTGCTTGCTCATGTAGCCAACT
CTTTTCCTTGTGCTCCAAGGACAATGGGCCGCTAATGCAAAGCTAGGCTGCCCCTGGTCTGTCTCTTTTTTGCTA
CCTTGAGCGCCATGACGATTAGCAGCCGCATGGTGTTTGCATTCGCACGGTGCGTGGCATAAATCTGTGCAGCAT
GGGGCGGTGCTCATGACTTGCAGAGATCGAGGCCTGCCGTGGTCGCGCGTCCTGGCCCGGGTTGATGTGCGGCTG
GGCCTGCCTCTGAATGCGCTGGCTCTGACCTGCGTCGTCGTGATACTCTTTGGCATGATATTCCTGGCGTCGACA
AGGTACAAGAGGCCAAGAGCCATGGAGCCAAGAGCCATGGAGCCAAGAGCCTTGGAGCCAAGAGCCACCAAGCCA
AGAGCCAAGAAGCCAAGAGCTACAGCTAACTCTGTGGCGGTGCAGTGCCTTTAATGCCATCATGTCGGCCTCGAT
TGTGGCTCTCAATCTTTCCTACGCCATGCCCATTGCCGTCAACTGTGCCCAGGGACGCAAAGTACTGGCCCAGGC
TTCCTGGCGTCTACCAGCGTGGCTTGGCTGGACGGCAGATGCCATTGCCCTGTGCTACGTGCTGCTCACCACGGT
TCTCTTTCTCTTCCCGCCAAAGCTGCCTGTGACAGGCACAAACATGAGTAAGACACGGGCCTGGCCCCCAGCTGC
CTTGGTCTTGTTTGCTAATCGGGCAGACTACTGCATCGGCGCCTTTGTCATAATCGTCATGGTGTCCGTCTTGCA
ATGGCTGATGGACGGACGCAAGCACTTTACCGGCCCCCTTGTCAATGTCACAAGGCCTAGCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail