Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|3854
Gene name
LocationContig_249:549..2267
Strand-
Gene length (bp)1718
Transcript length (bp)1338
Coding sequence length (bp)1338
Protein length (aa) 446

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01053 Cys_Met_Meta_PP Cys/Met metabolism PLP-dependent enzyme 2.1E-20 271 440

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O74314|MET7_SCHPO Probable cystathionine gamma-synthase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC15D4.09c PE=3 SV=1 3 440 1.0E-58
sp|P38675|MET7_NEUCR Cystathionine gamma-synthase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=met-7 PE=3 SV=3 170 440 5.0E-40
sp|Q12198|METW_YEAST Putative cystathionine gamma-synthase YLL058W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YLL058W PE=1 SV=1 4 440 3.0E-32
sp|Q04533|METX_YEAST Putative cystathionine gamma-synthase YML082W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YML082W PE=1 SV=1 220 440 1.0E-24
sp|P47164|MET7_YEAST Cystathionine gamma-synthase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=STR2 PE=1 SV=1 220 440 3.0E-22
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[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|O74314|MET7_SCHPO Probable cystathionine gamma-synthase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC15D4.09c PE=3 SV=1 3 440 1.0E-58
sp|P38675|MET7_NEUCR Cystathionine gamma-synthase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=met-7 PE=3 SV=3 170 440 5.0E-40
sp|Q12198|METW_YEAST Putative cystathionine gamma-synthase YLL058W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YLL058W PE=1 SV=1 4 440 3.0E-32
sp|Q04533|METX_YEAST Putative cystathionine gamma-synthase YML082W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YML082W PE=1 SV=1 220 440 1.0E-24
sp|P47164|MET7_YEAST Cystathionine gamma-synthase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=STR2 PE=1 SV=1 220 440 3.0E-22
sp|O05394|MCCB_BACSU Cystathionine gamma-lyase OS=Bacillus subtilis (strain 168) GN=mccB PE=1 SV=1 221 440 2.0E-15
sp|Q1M0P5|METB_HELPX Cystathionine gamma-synthase OS=Helicobacter pylori GN=metB PE=1 SV=1 203 440 3.0E-15
sp|P38675|MET7_NEUCR Cystathionine gamma-synthase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=met-7 PE=3 SV=3 4 172 4.0E-15
sp|P56069|METB_HELPY Cystathionine gamma-synthase OS=Helicobacter pylori (strain ATCC 700392 / 26695) GN=metB PE=1 SV=1 203 440 8.0E-15
sp|Q83A83|METC_COXBU Cystathionine beta-lyase OS=Coxiella burnetii (strain RSA 493 / Nine Mile phase I) GN=metC PE=1 SV=1 252 440 2.0E-14
sp|P47164|MET7_YEAST Cystathionine gamma-synthase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=STR2 PE=1 SV=1 1 254 1.0E-13
sp|Q9ZMW7|METB_HELPJ Cystathionine gamma-synthase OS=Helicobacter pylori (strain J99 / ATCC 700824) GN=metB PE=3 SV=1 203 440 7.0E-13
sp|P0A4K2|METC_LACLA Cystathionine beta-lyase OS=Lactococcus lactis subsp. lactis (strain IL1403) GN=metC PE=3 SV=1 204 440 4.0E-11
sp|O31632|METC_BACSU Cystathionine beta-lyase MetC OS=Bacillus subtilis (strain 168) GN=metC PE=1 SV=1 221 440 4.0E-11
sp|A2RM21|METC_LACLM Cystathionine beta-lyase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=metC PE=1 SV=1 204 440 4.0E-11
sp|P44502|METB_HAEIN Cystathionine gamma-synthase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=metB PE=3 SV=1 272 416 7.0E-10
sp|O31631|METI_BACSU Cystathionine gamma-synthase/O-acetylhomoserine (thiol)-lyase OS=Bacillus subtilis (strain 168) GN=metI PE=1 SV=1 209 416 2.0E-09
sp|P0C2T9|METC_LACLC Cystathionine beta-lyase OS=Lactococcus lactis subsp. cremoris GN=metC PE=1 SV=1 204 440 2.0E-09
sp|P53780|METC_ARATH Cystathionine beta-lyase, chloroplastic OS=Arabidopsis thaliana GN=At3g57050 PE=1 SV=1 179 415 1.0E-07
sp|Q9C876|CGS2_ARATH Probable cystathionine gamma-synthase 2 OS=Arabidopsis thaliana GN=CGS2 PE=3 SV=1 191 440 4.0E-07
sp|P00935|METB_ECOLI Cystathionine gamma-synthase OS=Escherichia coli (strain K12) GN=metB PE=1 SV=1 273 440 9.0E-07
sp|P9WGB7|METB_MYCTU Cystathionine gamma-synthase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=metB PE=1 SV=1 273 440 3.0E-06
sp|P9WGB6|METB_MYCTO Cystathionine gamma-synthase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=metB PE=3 SV=1 273 440 3.0E-06
sp|P66876|METB_MYCBO Cystathionine gamma-synthase OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=metB PE=3 SV=1 273 440 3.0E-06
sp|P13254|MEGL_PSEPU Methionine gamma-lyase OS=Pseudomonas putida GN=mdeA PE=1 SV=2 273 416 7.0E-06
sp|P9WGB5|METZ_MYCTU O-succinylhomoserine sulfhydrylase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=metZ PE=1 SV=1 272 440 7.0E-06
sp|P9WGB4|METZ_MYCTO O-succinylhomoserine sulfhydrylase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=metZ PE=3 SV=1 272 440 7.0E-06
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GO

GO Term Description Terminal node
GO:0019346 transsulfuration Yes
GO:0030170 pyridoxal phosphate binding Yes
GO:0043436 oxoacid metabolic process No
GO:0019842 vitamin binding No
GO:0006790 sulfur compound metabolic process No
GO:0019752 carboxylic acid metabolic process No
GO:0006082 organic acid metabolic process No
GO:0008150 biological_process No
GO:0005488 binding No
GO:0000096 sulfur amino acid metabolic process No
GO:0003674 molecular_function No
GO:1901605 alpha-amino acid metabolic process No
GO:0006534 cysteine metabolic process No
GO:0043167 ion binding No
GO:0006520 cellular amino acid metabolic process No
GO:0050667 homocysteine metabolic process No
GO:0009069 serine family amino acid metabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:0097159 organic cyclic compound binding No
GO:1901363 heterocyclic compound binding No
GO:0071704 organic substance metabolic process No
GO:0044281 small molecule metabolic process No
GO:0044237 cellular metabolic process No
GO:0036094 small molecule binding No
GO:0008152 metabolic process No
GO:0009987 cellular process No
GO:0070279 vitamin B6 binding No
GO:0044238 primary metabolic process No
GO:0009092 homoserine metabolic process No
GO:1901564 organonitrogen compound metabolic process No
GO:0043168 anion binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 29 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|3854
MASKLGDAIPNEEHAVSVSLPKWKHVEGWARRDHGIISQLQTGYPRFFINRRIVQLAQQLGRWASRLPRDDACYR
AATASGKTALLLPSKWMALTCQAHLDGYNKEAPLEDLQVVHVAFDGQLSRVTGHGQQGAAEGASHRDLYMVLYPE
RLWPQAKAFWQHTGFGISSRLAAHWLGNAPFLQASGLEGGERVPVQEAAQAALALGQRLADLYEAGRDLVFLYPT
GMSAIARTALAIRSLQQSGHEHRVAVFGFLYVDTFKVLTEAGLSIDALYTEFAGNPLLGSLDLGRLHALSQTHGF
VLAVDDTVGTPVNLCLAPLCDVVCSSLTKMFSGACNVMGGCAVVSPSSPRRQALCQALAAHQQQSGGPATYFASD
LVVMERNSRDFALRVAAASRNAQQLSLRLRRHPAVKTVYYPLGSPTQHLYDCYRRPGAGYGYLLSPGHQL*
Coding >OphauB2|3854
ATGGCGAGCAAGCTGGGAGATGCGATTCCCAACGAAGAGCACGCCGTCAGCGTCTCCCTGCCGAAATGGAAACAC
GTCGAGGGCTGGGCGCGGCGCGACCATGGCATTATTTCGCAGCTGCAGACGGGCTACCCCCGCTTCTTCATCAAC
CGCCGCATCGTGCAGCTCGCACAGCAGCTCGGGCGCTGGGCCAGCAGGCTCCCGCGAGATGACGCATGCTACCGC
GCGGCAACGGCCAGCGGCAAGACTGCGCTGCTGCTGCCGAGCAAGTGGATGGCGCTCACCTGCCAAGCCCATCTC
GACGGGTACAACAAGGAGGCGCCGCTCGAGGACTTGCAGGTGGTGCATGTGGCCTTTGACGGCCAGCTCAGCAGG
GTGACGGGCCACGGCCAGCAGGGAGCAGCAGAGGGCGCGTCGCACAGAGACTTGTACATGGTGCTGTACCCGGAG
CGTCTGTGGCCGCAGGCAAAGGCCTTTTGGCAGCACACGGGCTTTGGCATCTCGAGCCGCCTGGCCGCCCATTGG
CTCGGCAACGCGCCCTTTCTCCAAGCCTCGGGCCTCGAGGGCGGCGAGAGGGTGCCGGTGCAAGAGGCGGCGCAG
GCGGCGCTGGCACTTGGGCAGCGGCTGGCCGACTTGTACGAGGCGGGCCGGGACCTCGTCTTCCTCTACCCAACG
GGCATGTCGGCCATTGCGCGGACGGCGCTGGCTATCCGCAGTCTGCAGCAGAGCGGCCACGAGCATCGGGTTGCC
GTCTTTGGCTTCTTGTACGTGGACACGTTCAAGGTGCTGACCGAGGCGGGCCTGAGCATCGACGCCCTCTACACC
GAGTTTGCAGGCAACCCGCTGCTCGGCTCGCTGGACCTGGGGCGGCTGCACGCGCTCTCGCAGACGCACGGCTTT
GTCCTGGCAGTGGACGACACGGTCGGCACGCCCGTCAACCTGTGTCTGGCGCCGCTGTGCGACGTGGTGTGCTCG
AGCCTGACCAAGATGTTTAGCGGCGCCTGCAATGTCATGGGCGGCTGTGCCGTCGTCTCGCCCTCGTCGCCTCGC
CGCCAGGCCCTCTGCCAGGCCCTGGCCGCCCACCAGCAGCAATCGGGCGGCCCAGCAACCTACTTTGCCTCGGAT
CTCGTCGTCATGGAGCGCAACAGCCGCGACTTTGCCCTGCGTGTTGCAGCCGCCAGCCGCAATGCCCAGCAGCTC
AGTCTTCGCCTGCGCCGCCACCCCGCCGTCAAGACGGTCTACTATCCCCTCGGCAGTCCCACCCAGCATCTCTAC
GACTGCTACCGCCGCCCGGGCGCTGGCTACGGCTACCTCTTGTCCCCTGGGCACCAACTTTAG
Transcript >OphauB2|3854
ATGGCGAGCAAGCTGGGAGATGCGATTCCCAACGAAGAGCACGCCGTCAGCGTCTCCCTGCCGAAATGGAAACAC
GTCGAGGGCTGGGCGCGGCGCGACCATGGCATTATTTCGCAGCTGCAGACGGGCTACCCCCGCTTCTTCATCAAC
CGCCGCATCGTGCAGCTCGCACAGCAGCTCGGGCGCTGGGCCAGCAGGCTCCCGCGAGATGACGCATGCTACCGC
GCGGCAACGGCCAGCGGCAAGACTGCGCTGCTGCTGCCGAGCAAGTGGATGGCGCTCACCTGCCAAGCCCATCTC
GACGGGTACAACAAGGAGGCGCCGCTCGAGGACTTGCAGGTGGTGCATGTGGCCTTTGACGGCCAGCTCAGCAGG
GTGACGGGCCACGGCCAGCAGGGAGCAGCAGAGGGCGCGTCGCACAGAGACTTGTACATGGTGCTGTACCCGGAG
CGTCTGTGGCCGCAGGCAAAGGCCTTTTGGCAGCACACGGGCTTTGGCATCTCGAGCCGCCTGGCCGCCCATTGG
CTCGGCAACGCGCCCTTTCTCCAAGCCTCGGGCCTCGAGGGCGGCGAGAGGGTGCCGGTGCAAGAGGCGGCGCAG
GCGGCGCTGGCACTTGGGCAGCGGCTGGCCGACTTGTACGAGGCGGGCCGGGACCTCGTCTTCCTCTACCCAACG
GGCATGTCGGCCATTGCGCGGACGGCGCTGGCTATCCGCAGTCTGCAGCAGAGCGGCCACGAGCATCGGGTTGCC
GTCTTTGGCTTCTTGTACGTGGACACGTTCAAGGTGCTGACCGAGGCGGGCCTGAGCATCGACGCCCTCTACACC
GAGTTTGCAGGCAACCCGCTGCTCGGCTCGCTGGACCTGGGGCGGCTGCACGCGCTCTCGCAGACGCACGGCTTT
GTCCTGGCAGTGGACGACACGGTCGGCACGCCCGTCAACCTGTGTCTGGCGCCGCTGTGCGACGTGGTGTGCTCG
AGCCTGACCAAGATGTTTAGCGGCGCCTGCAATGTCATGGGCGGCTGTGCCGTCGTCTCGCCCTCGTCGCCTCGC
CGCCAGGCCCTCTGCCAGGCCCTGGCCGCCCACCAGCAGCAATCGGGCGGCCCAGCAACCTACTTTGCCTCGGAT
CTCGTCGTCATGGAGCGCAACAGCCGCGACTTTGCCCTGCGTGTTGCAGCCGCCAGCCGCAATGCCCAGCAGCTC
AGTCTTCGCCTGCGCCGCCACCCCGCCGTCAAGACGGTCTACTATCCCCTCGGCAGTCCCACCCAGCATCTCTAC
GACTGCTACCGCCGCCCGGGCGCTGGCTACGGCTACCTCTTGTCCCCTGGGCACCAACTTTAG
Gene >OphauB2|3854
ATGGCGAGCAAGCTGGGAGATGCGATTCCCAACGAAGAGCACGTAAGCATTGCCTTGCTCCCGTCTTTGCCTTGC
TTTGGCACCTCTTTTCCTAGTCTCCTCTTGCCAGTCCAGTCGCTTGTCCAAGACGATGCTTGTCCTCTACTAACC
TCTTTTTGCCTCCCTCCCCGGCCGCCCGCCGCCCGCTCTAGGCCGTCAGCGTCTCCCTGCCGAAATGGAAACACG
TCGAGGGCTGGGCGCGGCGCGACCATGGCATTATTTCGCAGCTGCAGACGGGCTACCCCCGCTTCTTCATCAACC
GCCGCATCGTGCAGCTCGCACAGCAGCTCGGGCGCTGGGCCAGCAGGCTCCCGCGAGATGACGCATGCTACCGCG
CGGCAACGGCCAGCGGCAAGACTGCGCTGCTGCTGCCGAGCAAGTGGATGGCGCTCACCTGCCAAGCCCATCTCG
ACGGGTACAACAAGGAGGCGCCGCTCGAGGACTTGCAGGTGGTGCATGTGGCCTTTGACGGCCAGCTCAGCAGGG
TGACGGGCCACGGCCAGCAGGGAGCAGCAGAGGGCGCGTCGCACAGAGACTTGTACATGGTGCTGTACCCGGAGC
GTCTGTGGCCGCAGGCAAAGGCCTTTTGGCAGCACACGGGCTTTGGCATCTCGAGCCGCCTGGCCGCCCATTGGC
TCGGCAACGCGCCCTTTCTCCAAGCCTCGGGCCTCGAGGGCGGCGAGAGGGTGCCGGTGCAAGAGGCGGCGCAGG
CGGCGCTGGCACTTGGGCAGCGGCTGGCCGACTTGTACGAGGCGGGCCGGGACCTCGTCTTCCTCTACCCAACGG
GCATGTCGGCCATTGCGCGGACGGCGCTGGCTATCCGCAGTCTGCAGCAGAGCGGCCACGAGCATCGGGTTGCCG
TCTTTGGGTCAGTTGAATGACAGTTGAATGACTCAGTTGAATGACAGTTGAATGACAGTGGAATGGCTTGATGAC
TTGAGTGTGGCGGCTAACCAGGCTGGCAGCTTCTTGTACGTGGACACGTTCAAGGTGCTGACCGAGGTGTGCGGG
TTTGAATACGTGCTGTACGGCGACGCGTCGGTCGAGGCGCTCGAGGCTGATTTGCAGGCGGGCCTGAGCATCGAC
GCCCTCTACACCGAGTTTGCAGGCAACCCGCTGCTCGGCTCGCTGGACCTGGGGCGGCTGCACGCGCTCTCGCAG
ACGCACGGCTTTGTCCTGGCAGTGGACGACACGGTCGGCACGCCCGTCAACCTGTGTCTGGCGCCGCTGTGCGAC
GTGGTGTGCTCGAGCCTGACCAAGATGTTTAGCGGCGCCTGCAATGTCATGGGCGGCTGTGCCGTCGTCTCGCCC
TCGTCGCCTCGCCGCCAGGCCCTCTGCCAGGCCCTGGCCGCCCACCAGCAGCAATCGGGCGGCCCAGCAACCTAC
TTTGCCTCGGATCTCGTCGTCATGGAGCGCAACAGCCGCGACTTTGCCCTGCGTGTTGCAGCCGCCAGCCGCAAT
GCCCAGCAGCTCAGTCTTCGCCTGCGCCGCCACCCCGCCGTCAAGACGGTCTACTATCCCCTCGGCAGTCCCACC
CAGCATCTCTACGACTGCTACCGCCGCCCGGGCGCTGGCTACGGCTACCTCTTGTCCGTGTGCTTTGTGTCGCCG
CCTGCTGCCTGTGCCTTTCACGATGCCCTCGACATGGCCAAGGGGCCCAGCCTGGGCACCAACTTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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