© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|3850 |
| Gene name | |
| Location | Contig_248:12113..13828 |
| Strand | + |
| Gene length (bp) | 1715 |
| Transcript length (bp) | 1377 |
| Coding sequence length (bp) | 1377 |
| Protein length (aa) | 459 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 4.5E-23 | 71 | 415 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q08280|BSC6_YEAST | Bypass of stop codon protein 6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BSC6 PE=1 SV=1 | 4 | 457 | 5.0E-37 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0051179 | localization | No |
| GO:0005215 | transporter activity | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 47 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 70 | 92 | 22 |
| 2 | 102 | 124 | 22 |
| 3 | 131 | 148 | 17 |
| 4 | 153 | 175 | 22 |
| 5 | 188 | 210 | 22 |
| 6 | 220 | 239 | 19 |
| 7 | 279 | 301 | 22 |
| 8 | 316 | 338 | 22 |
| 9 | 345 | 367 | 22 |
| 10 | 372 | 391 | 19 |
| 11 | 398 | 420 | 22 |
| 12 | 430 | 449 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|3850 MATAAKNTRGPKQQAVLYPDNGQVQQEHVDPPGMDPEAGSGAHETSPLIGNISGETWKDPIRNLYRLGTCFWSFL LMGANDASYGALIPYLEKYYHVSHGSVSFVFLSPTIGYIASAISNHYLHIKVGQRGVAVIAGACHVIAYSIMSAH PPFIILVLSYILVGFGNGVVDCGWNAWVSSLKSASQVLGLLHAFYGAGGIIGPLLATALITKANLEWYTFCYIMI GLGGIETIVMSWAFWDLTASKYRHGHGPDANVPKAGLYTTLFEKPAARVCWTAASFLFILVGMEVALGGWIVAFM LDERHTEKFASGMVSVVFWLGMTMGRAILGFLTPVIGAQYSTMVYIVLAMTGLVVFWLVPIFYVSAIAVASMGFF LGPLFPNVILVVNMLLPPQMHVTAIGFASAIGGSGAAVMPFVTGVLAQYAKGVKVLPPIILGLLGVTFILWNCFP AMNKARQG* |
| Coding | >OphauB2|3850 ATGGCAACCGCAGCGAAGAATACTCGAGGACCAAAGCAGCAGGCGGTGCTTTACCCAGACAATGGTCAAGTCCAG CAGGAACATGTTGACCCGCCTGGAATGGACCCTGAAGCTGGTAGCGGAGCGCACGAAACAAGTCCGCTGATTGGA AACATTTCTGGCGAGACATGGAAAGACCCTATACGCAATCTATATCGGCTGGGCACTTGTTTTTGGTCCTTTTTG CTTATGGGAGCTAATGATGCCTCTTATGGAGCCCTAATACCCTATCTCGAAAAGTATTACCACGTTAGCCACGGG TCGGTATCGTTCGTCTTCTTGTCGCCCACTATCGGCTACATTGCATCGGCCATTAGCAATCACTATCTGCACATC AAGGTGGGACAGCGCGGCGTAGCTGTGATTGCTGGAGCGTGCCATGTGATTGCATATAGCATCATGAGTGCTCAT CCTCCATTTATAATCCTCGTCTTGTCGTACATCTTGGTTGGCTTTGGCAACGGGGTTGTGGACTGCGGGTGGAAT GCCTGGGTAAGCAGCCTGAAGAGCGCAAGCCAGGTTCTCGGCCTGTTGCATGCCTTTTATGGTGCTGGCGGCATC ATTGGGCCCTTGCTGGCGACTGCCCTCATAACCAAGGCAAATCTTGAATGGTATACCTTTTGCTACATCATGATT GGCCTTGGCGGAATCGAAACTATTGTCATGTCATGGGCGTTTTGGGACCTGACTGCATCAAAATACCGCCATGGA CACGGTCCAGACGCAAATGTGCCCAAAGCCGGCTTATACACGACACTGTTTGAGAAGCCGGCTGCACGAGTCTGC TGGACTGCAGCTTCATTCCTTTTCATCTTGGTGGGCATGGAAGTAGCCCTCGGTGGATGGATAGTGGCCTTTATG CTCGATGAGCGTCACACGGAGAAATTTGCCAGCGGCATGGTGTCGGTTGTCTTTTGGCTAGGGATGACAATGGGC AGAGCGATTCTGGGCTTTCTGACTCCGGTAATTGGGGCGCAGTACTCGACCATGGTTTATATTGTTTTGGCCATG ACGGGGCTCGTGGTGTTTTGGCTGGTGCCCATCTTCTACGTGTCTGCCATTGCGGTGGCCTCGATGGGCTTCTTT CTCGGCCCCTTGTTTCCAAATGTGATTTTGGTGGTCAACATGTTGCTGCCACCACAAATGCATGTTACTGCAATA GGCTTCGCATCTGCCATTGGAGGGAGCGGAGCGGCGGTGATGCCCTTTGTGACGGGTGTCTTGGCCCAGTATGCC AAGGGAGTCAAGGTGCTGCCGCCCATTATACTGGGGTTGTTGGGCGTCACGTTTATCTTGTGGAATTGTTTTCCG GCAATGAACAAGGCAAGACAGGGGTAG |
| Transcript | >OphauB2|3850 ATGGCAACCGCAGCGAAGAATACTCGAGGACCAAAGCAGCAGGCGGTGCTTTACCCAGACAATGGTCAAGTCCAG CAGGAACATGTTGACCCGCCTGGAATGGACCCTGAAGCTGGTAGCGGAGCGCACGAAACAAGTCCGCTGATTGGA AACATTTCTGGCGAGACATGGAAAGACCCTATACGCAATCTATATCGGCTGGGCACTTGTTTTTGGTCCTTTTTG CTTATGGGAGCTAATGATGCCTCTTATGGAGCCCTAATACCCTATCTCGAAAAGTATTACCACGTTAGCCACGGG TCGGTATCGTTCGTCTTCTTGTCGCCCACTATCGGCTACATTGCATCGGCCATTAGCAATCACTATCTGCACATC AAGGTGGGACAGCGCGGCGTAGCTGTGATTGCTGGAGCGTGCCATGTGATTGCATATAGCATCATGAGTGCTCAT CCTCCATTTATAATCCTCGTCTTGTCGTACATCTTGGTTGGCTTTGGCAACGGGGTTGTGGACTGCGGGTGGAAT GCCTGGGTAAGCAGCCTGAAGAGCGCAAGCCAGGTTCTCGGCCTGTTGCATGCCTTTTATGGTGCTGGCGGCATC ATTGGGCCCTTGCTGGCGACTGCCCTCATAACCAAGGCAAATCTTGAATGGTATACCTTTTGCTACATCATGATT GGCCTTGGCGGAATCGAAACTATTGTCATGTCATGGGCGTTTTGGGACCTGACTGCATCAAAATACCGCCATGGA CACGGTCCAGACGCAAATGTGCCCAAAGCCGGCTTATACACGACACTGTTTGAGAAGCCGGCTGCACGAGTCTGC TGGACTGCAGCTTCATTCCTTTTCATCTTGGTGGGCATGGAAGTAGCCCTCGGTGGATGGATAGTGGCCTTTATG CTCGATGAGCGTCACACGGAGAAATTTGCCAGCGGCATGGTGTCGGTTGTCTTTTGGCTAGGGATGACAATGGGC AGAGCGATTCTGGGCTTTCTGACTCCGGTAATTGGGGCGCAGTACTCGACCATGGTTTATATTGTTTTGGCCATG ACGGGGCTCGTGGTGTTTTGGCTGGTGCCCATCTTCTACGTGTCTGCCATTGCGGTGGCCTCGATGGGCTTCTTT CTCGGCCCCTTGTTTCCAAATGTGATTTTGGTGGTCAACATGTTGCTGCCACCACAAATGCATGTTACTGCAATA GGCTTCGCATCTGCCATTGGAGGGAGCGGAGCGGCGGTGATGCCCTTTGTGACGGGTGTCTTGGCCCAGTATGCC AAGGGAGTCAAGGTGCTGCCGCCCATTATACTGGGGTTGTTGGGCGTCACGTTTATCTTGTGGAATTGTTTTCCG GCAATGAACAAGGCAAGACAGGGGTAG |
| Gene | >OphauB2|3850 ATGGCAACCGCAGCGAAGAATACTCGAGGACCAAAGCAGCAGGCGGTGCTTTACCCAGACAATGGTCAAGTCCAG CAGGAACATGTTGACCCGCCTGGAATGGACCCTGAAGCTGGTAGCGGAGCGCACGAAACAAGTCCGCTGATTGGA AACATTTCTGGCGAGACATGGAAAGACCCTATACGCAATCTATATCGGCTGGGCACTTGTTTTTGGTCCTTTTTG CTTATGGGAGCTAATGATGCCTCTTATGGAGTATGTCTCATCAGAGGAAACAAAGCTCCTCCGCCCCCCTGCCAA TTTTCTTTTCAAGACTGCAAGGTTACTGACTTGTGCATCTCTGTCACTAGGCCCTAATACCCTATGTGAGATGAA TCATGTCGCTCCGAGTCGGGTGGGTGACATTGACATGGCATCGGCTTGAAGCTCGAAAAGTATTACCACGTTAGC CACGGGTCGGTATCGTTCGTCTTCTTGTCGCCCACTATCGGCTACATTGCATCGGCCATTAGCAATCACTATCTG CACATCAAGGTGGGACAGCGCGGCGTAGCTGTGATTGCTGGAGCGTGCCATGTGATTGCATATAGCATCATGAGT GCTCATCCTCCATTTATAATCCTCGTCTTGTCGTACATCTTGGTTGGCTTTGGCAACGGGGTTGTGGACTGCGGG TGGAATGCCTGGGTAAGCAGCCTGAAGAGCGCAAGCCAGGTTCTCGGCCTGTTGCATGCCTTTTATGGTGCTGGC GGCATCATTGGGCCCTTGCTGGCGACTGCCCTCATAACCAAGGCAAATCTTGAATGGTATACCTTTTGCTACATC ATGGTTTGTTGGCCCCATGTTGGCCTTGGTTTGGCTGCTGGCAAGGAGGCTGGGCTGACGGCATTTGTTGCAGAT TGGCCTTGGCGGAATCGAAACTATTGTCATGTCATGGGCGTTTTGGGACCTGACTGCATCAAAATACCGCCATGG ACACGGTCCAGACGCAAATGTGCCCAAAGCCGGCTTATACACGACACTGTTTGAGAAGCCGGCTGCACGAGTCTG CTGGACTGCAGCTTCATTCCTTTTCATCTTGGTGGGCATGGAAGTAGCCCTCGGTGGATGGATAGTGGCCTTTAT GCTCGATGAGCGTCACACGGAGAAATTTGCCAGCGGCATGGTGTCGGTTGTCTTTTGGCTAGGGATGACAATGGG CAGAGCGATTCTGGGCTTTCTGACTCCGGTAATTGGGGCGCAGTACTCGACCATGGTAAGTCTGTCTGATTCGGC CGAGATGGCGCAAAAAAAAAAGAAGAAGAAAAAAAGAGGGAGGGAAAAAAAAAGAAGCAGCAAGACTACTGACCA AGAACGGCTTCATCTAGGTTTATATTGTTTTGGCCATGACGGGGCTCGTGGTGTTTTGGCTGGTGCCCATCTTCT ACGTGTCTGCCATTGCGGTGGCCTCGATGGGCTTCTTTCTCGGCCCCTTGTTTCCAAATGTGATTTTGGTGGTCA ACATGTTGCTGCCACCACAAATGCATGTTACTGCAATAGGCTTCGCATCTGCCATTGGAGGGAGCGGAGCGGCGG TGATGCCCTTTGTGACGGGTGTCTTGGCCCAGTATGCCAAGGGAGTCAAGGTGCTGCCGCCCATTATACTGGGGT TGTTGGGCGTCACGTTTATCTTGTGGAATTGTTTTCCGGCAATGAACAAGGCAAGACAGGGGTAG |