Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|381
Gene name
LocationContig_104:9757..11227
Strand+
Gene length (bp)1470
Transcript length (bp)1413
Coding sequence length (bp)1413
Protein length (aa) 471

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P42565|FARX_LYMST FMRFamide-related neuropeptides OS=Lymnaea stagnalis PE=1 SV=1 143 293 8.0E-08
sp|P42565|FARX_LYMST FMRFamide-related neuropeptides OS=Lymnaea stagnalis PE=1 SV=1 84 234 1.0E-07

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|381
MHFSKLTFALVGSVASAAPVASNFEADPMLQISKDQADSSYFTADPILQISKDKAGSSYFQADPMLQIAKDNAKS
SYDRRSTLKADPILQISRDQADSSYFQADPMLQINKDQGASSYFQADPMLQIAKDHAQSSYNKRDTLKADPILQI
SKDQGASSYFQADPMLQINKDQGASSYFQADPMLQIAKDHAQSSYNKRDTLKADPILQISKNNGESSYFQADPML
QIAKDQGASSYFQADPMLQIAKDNAKSSYDRRSNFKADPILQISKNNGESSYFQADPMLRINKDQAGSSYFQADP
MLQINKDNAASSYDKRANFKADPILQISKNNGESSYFQADPMLRINKDNGQSSYFTADPMLQINKDGAANSYFTA
DPMLQINKDSAANSYNVRRDTLKADPILQISKDQGASSYFQADPMLQINKDGAANSYFTADPMLQINKDGAANSY
FTADPMLQVNKDNAASSYDA*
Coding >OphauB2|381
ATGCACTTTAGCAAGCTGACCTTTGCCCTTGTGGGCTCCGTGGCCTCGGCTGCGCCTGTTGCTAGCAACTTTGAG
GCTGACCCCATGCTTCAAATCTCAAAGGACCAGGCCGACTCGTCCTACTTTACCGCAGACCCTATTCTGCAAATC
TCAAAGGATAAGGCTGGCTCGTCCTACTTCCAGGCAGACCCCATGCTCCAGATTGCAAAGGATAACGCCAAGTCA
TCCTATGACAGGCGGAGCACGCTCAAGGCGGACCCTATCTTGCAAATCTCCAGGGACCAGGCAGATTCTTCCTAC
TTCCAGGCAGACCCCATGCTACAAATCAACAAAGATCAGGGTGCCTCTTCTTACTTCCAGGCCGATCCCATGCTA
CAAATTGCAAAGGACCACGCCCAGTCTTCGTACAATAAGCGAGACACCCTCAAGGCAGACCCAATTTTGCAAATC
TCCAAGGACCAGGGTGCTTCGTCCTACTTCCAGGCCGACCCCATGCTTCAAATCAATAAAGATCAGGGTGCCTCT
TCTTACTTCCAGGCTGACCCCATGCTACAAATTGCAAAGGACCACGCCCAGTCTTCATACAATAAGCGAGACACG
CTAAAGGCCGACCCTATCCTTCAAATTTCAAAGAATAATGGAGAGTCGTCCTACTTCCAGGCCGACCCAATGCTT
CAGATTGCCAAGGACCAGGGTGCATCTTCCTACTTCCAGGCAGACCCCATGCTACAAATCGCAAAGGACAATGCC
AAGTCGTCGTATGACAGGCGCTCAAACTTTAAGGCTGACCCCATCCTCCAGATTTCCAAGAATAATGGAGAGTCG
TCCTACTTCCAGGCTGATCCTATGCTACGCATCAACAAGGACCAAGCCGGCTCGTCCTACTTCCAGGCTGACCCT
ATGTTGCAAATCAACAAGGACAACGCTGCCTCTTCGTACGACAAGCGCGCCAACTTCAAGGCGGACCCCATCCTC
CAGATTTCAAAGAACAATGGAGAGTCGTCCTACTTCCAGGCTGACCCCATGCTGAGGATCAACAAGGACAACGGC
CAGTCGTCATACTTTACTGCCGACCCCATGCTGCAGATTAACAAGGACGGTGCTGCTAATTCCTACTTTACTGCC
GACCCCATGCTGCAGATCAACAAGGACAGTGCTGCCAACTCGTACAATGTCAGGCGTGACACCCTCAAGGCCGAC
CCCATTCTCCAGATTTCCAAGGACCAGGGAGCCTCATCCTACTTCCAGGCCGATCCCATGCTGCAGATCAACAAG
GACGGTGCTGCCAACTCTTACTTCACTGCCGACCCCATGCTGCAGATCAACAAGGACGGTGCTGCCAACTCCTAC
TTCACTGCCGACCCCATGCTGCAAGTCAACAAGGACAACGCGGCATCGTCCTACGATGCTTAG
Transcript >OphauB2|381
ATGCACTTTAGCAAGCTGACCTTTGCCCTTGTGGGCTCCGTGGCCTCGGCTGCGCCTGTTGCTAGCAACTTTGAG
GCTGACCCCATGCTTCAAATCTCAAAGGACCAGGCCGACTCGTCCTACTTTACCGCAGACCCTATTCTGCAAATC
TCAAAGGATAAGGCTGGCTCGTCCTACTTCCAGGCAGACCCCATGCTCCAGATTGCAAAGGATAACGCCAAGTCA
TCCTATGACAGGCGGAGCACGCTCAAGGCGGACCCTATCTTGCAAATCTCCAGGGACCAGGCAGATTCTTCCTAC
TTCCAGGCAGACCCCATGCTACAAATCAACAAAGATCAGGGTGCCTCTTCTTACTTCCAGGCCGATCCCATGCTA
CAAATTGCAAAGGACCACGCCCAGTCTTCGTACAATAAGCGAGACACCCTCAAGGCAGACCCAATTTTGCAAATC
TCCAAGGACCAGGGTGCTTCGTCCTACTTCCAGGCCGACCCCATGCTTCAAATCAATAAAGATCAGGGTGCCTCT
TCTTACTTCCAGGCTGACCCCATGCTACAAATTGCAAAGGACCACGCCCAGTCTTCATACAATAAGCGAGACACG
CTAAAGGCCGACCCTATCCTTCAAATTTCAAAGAATAATGGAGAGTCGTCCTACTTCCAGGCCGACCCAATGCTT
CAGATTGCCAAGGACCAGGGTGCATCTTCCTACTTCCAGGCAGACCCCATGCTACAAATCGCAAAGGACAATGCC
AAGTCGTCGTATGACAGGCGCTCAAACTTTAAGGCTGACCCCATCCTCCAGATTTCCAAGAATAATGGAGAGTCG
TCCTACTTCCAGGCTGATCCTATGCTACGCATCAACAAGGACCAAGCCGGCTCGTCCTACTTCCAGGCTGACCCT
ATGTTGCAAATCAACAAGGACAACGCTGCCTCTTCGTACGACAAGCGCGCCAACTTCAAGGCGGACCCCATCCTC
CAGATTTCAAAGAACAATGGAGAGTCGTCCTACTTCCAGGCTGACCCCATGCTGAGGATCAACAAGGACAACGGC
CAGTCGTCATACTTTACTGCCGACCCCATGCTGCAGATTAACAAGGACGGTGCTGCTAATTCCTACTTTACTGCC
GACCCCATGCTGCAGATCAACAAGGACAGTGCTGCCAACTCGTACAATGTCAGGCGTGACACCCTCAAGGCCGAC
CCCATTCTCCAGATTTCCAAGGACCAGGGAGCCTCATCCTACTTCCAGGCCGATCCCATGCTGCAGATCAACAAG
GACGGTGCTGCCAACTCTTACTTCACTGCCGACCCCATGCTGCAGATCAACAAGGACGGTGCTGCCAACTCCTAC
TTCACTGCCGACCCCATGCTGCAAGTCAACAAGGACAACGCGGCATCGTCCTACGATGCTTAG
Gene >OphauB2|381
ATGCACTTTAGCAAGCTGACCTTTGCCCTTGTGGGCTCCGTGGCCTCGGCTGCGCCTGTTGCTAGTGCGTCGAGT
CTTTCCAGGGCTTAGAGGGCGTGGGCGCTGACCTTGAGGCTTGCAGGCAACTTTGAGGCTGACCCCATGCTTCAA
ATCTCAAAGGACCAGGCCGACTCGTCCTACTTTACCGCAGACCCTATTCTGCAAATCTCAAAGGATAAGGCTGGC
TCGTCCTACTTCCAGGCAGACCCCATGCTCCAGATTGCAAAGGATAACGCCAAGTCATCCTATGACAGGCGGAGC
ACGCTCAAGGCGGACCCTATCTTGCAAATCTCCAGGGACCAGGCAGATTCTTCCTACTTCCAGGCAGACCCCATG
CTACAAATCAACAAAGATCAGGGTGCCTCTTCTTACTTCCAGGCCGATCCCATGCTACAAATTGCAAAGGACCAC
GCCCAGTCTTCGTACAATAAGCGAGACACCCTCAAGGCAGACCCAATTTTGCAAATCTCCAAGGACCAGGGTGCT
TCGTCCTACTTCCAGGCCGACCCCATGCTTCAAATCAATAAAGATCAGGGTGCCTCTTCTTACTTCCAGGCTGAC
CCCATGCTACAAATTGCAAAGGACCACGCCCAGTCTTCATACAATAAGCGAGACACGCTAAAGGCCGACCCTATC
CTTCAAATTTCAAAGAATAATGGAGAGTCGTCCTACTTCCAGGCCGACCCAATGCTTCAGATTGCCAAGGACCAG
GGTGCATCTTCCTACTTCCAGGCAGACCCCATGCTACAAATCGCAAAGGACAATGCCAAGTCGTCGTATGACAGG
CGCTCAAACTTTAAGGCTGACCCCATCCTCCAGATTTCCAAGAATAATGGAGAGTCGTCCTACTTCCAGGCTGAT
CCTATGCTACGCATCAACAAGGACCAAGCCGGCTCGTCCTACTTCCAGGCTGACCCTATGTTGCAAATCAACAAG
GACAACGCTGCCTCTTCGTACGACAAGCGCGCCAACTTCAAGGCGGACCCCATCCTCCAGATTTCAAAGAACAAT
GGAGAGTCGTCCTACTTCCAGGCTGACCCCATGCTGAGGATCAACAAGGACAACGGCCAGTCGTCATACTTTACT
GCCGACCCCATGCTGCAGATTAACAAGGACGGTGCTGCTAATTCCTACTTTACTGCCGACCCCATGCTGCAGATC
AACAAGGACAGTGCTGCCAACTCGTACAATGTCAGGCGTGACACCCTCAAGGCCGACCCCATTCTCCAGATTTCC
AAGGACCAGGGAGCCTCATCCTACTTCCAGGCCGATCCCATGCTGCAGATCAACAAGGACGGTGCTGCCAACTCT
TACTTCACTGCCGACCCCATGCTGCAGATCAACAAGGACGGTGCTGCCAACTCCTACTTCACTGCCGACCCCATG
CTGCAAGTCAACAAGGACAACGCGGCATCGTCCTACGATGCTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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