Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|3798
Gene name
LocationContig_240:7343..8552
Strand+
Gene length (bp)1209
Transcript length (bp)1155
Coding sequence length (bp)1155
Protein length (aa) 385

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00494 SQS_PSY Squalene/phytoene synthase 1.0E-56 64 377

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|D3ZN43|NDUF6_RAT NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Rattus norvegicus GN=Ndufaf6 PE=3 SV=1 57 362 4.0E-45
sp|A2AIL4|NDUF6_MOUSE NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Mus musculus GN=Ndufaf6 PE=1 SV=1 57 362 2.0E-44
sp|A7YVD7|NDUF6_BOVIN NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Bos taurus GN=NDUFAF6 PE=2 SV=1 56 298 3.0E-42
sp|Q330K2|NDUF6_HUMAN NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Homo sapiens GN=NDUFAF6 PE=1 SV=2 57 362 3.0E-40
sp|Q9VYS5|NDUF6_DROME NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 homolog OS=Drosophila melanogaster GN=sicily PE=2 SV=1 56 359 1.0E-32
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|D3ZN43|NDUF6_RAT NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Rattus norvegicus GN=Ndufaf6 PE=3 SV=1 57 362 4.0E-45
sp|A2AIL4|NDUF6_MOUSE NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Mus musculus GN=Ndufaf6 PE=1 SV=1 57 362 2.0E-44
sp|A7YVD7|NDUF6_BOVIN NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Bos taurus GN=NDUFAF6 PE=2 SV=1 56 298 3.0E-42
sp|Q330K2|NDUF6_HUMAN NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Homo sapiens GN=NDUFAF6 PE=1 SV=2 57 362 3.0E-40
sp|Q9VYS5|NDUF6_DROME NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 homolog OS=Drosophila melanogaster GN=sicily PE=2 SV=1 56 359 1.0E-32
sp|Q54E48|NDUF6_DICDI NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 homolog OS=Dictyostelium discoideum GN=DDB_G0291852 PE=3 SV=1 57 298 4.0E-22
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GO

GO Term Description Terminal node
GO:0009058 biosynthetic process Yes
GO:0008152 metabolic process No
GO:0008150 biological_process No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup4501
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|5320
Ophiocordyceps australis map64 (Brazil) OphauB2|3798 (this protein)
Ophiocordyceps camponoti-floridani Ophcf2|01703
Ophiocordyceps camponoti-rufipedis Ophun1|6337
Ophiocordyceps kimflemingae Ophio5|4294
Ophiocordyceps subramaniannii Hirsu2|9385

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|3798
MSSIGPLQSMRPWPFQRPLLSMHRPRLVRSGLNRLAFARTKCRHFNTDAHVDSARKYCFAQLYKSDYDAYLIRRL
VPRPVQDTYAALRALNLELVRLPEVISNPTIGAMRITFWQDSIDQTFSDKPPREPICLLLHHGLRALEARAGSAT
KASIKFWISRLIKTRAKYMDNRPFPTMASLEDYAENTYSSIMYATLATLPLRSVHMDHMASHIGKACGITAILRG
IPLLAARAQPIKTPSGIEAPVTHEPHFLLPLEVMAEHGVKEEEVFRQGPAAHGLQDAVFTVATRANDHLLTAKDM
LKRLKEGQDAGHQFEHEGEAQHVYGDTNDSAQDLRHGFGVLLEATSAGHYLENLERANFDPFAVRSGGWRLPWKI
WQALSKERL*
Coding >OphauB2|3798
ATGTCTTCGATTGGCCCGCTGCAGTCCATGAGACCTTGGCCCTTTCAAAGGCCTCTCCTTTCCATGCATCGGCCA
CGACTAGTACGCAGTGGCCTCAACAGGCTCGCCTTTGCTCGCACAAAATGTCGCCACTTCAATACCGATGCTCAT
GTCGATTCGGCCAGGAAATACTGCTTTGCCCAACTCTATAAAAGCGACTACGATGCGTACCTTATCCGCCGCCTC
GTCCCTCGCCCTGTACAAGACACTTATGCCGCTCTTCGCGCATTGAATCTCGAGCTTGTCCGGCTTCCCGAAGTC
ATATCCAACCCAACCATTGGCGCCATGCGCATCACCTTCTGGCAAGACTCAATAGACCAAACATTTTCTGACAAG
CCCCCGCGCGAGCCCATATGCCTACTCCTACATCACGGTCTACGGGCACTCGAAGCCAGAGCTGGTAGCGCGACC
AAAGCATCCATCAAGTTTTGGATCTCGCGTCTCATCAAAACACGCGCCAAATACATGGATAATCGTCCCTTTCCG
ACCATGGCCAGCCTCGAAGACTACGCCGAAAACACTTACTCGTCCATCATGTACGCCACGCTGGCTACCCTGCCG
CTTCGCTCCGTGCACATGGACCACATGGCTAGCCACATTGGCAAGGCCTGTGGAATTACTGCCATTTTACGCGGC
ATTCCGCTTCTCGCTGCTCGTGCTCAGCCTATCAAGACGCCCTCTGGCATAGAAGCACCCGTTACTCATGAACCC
CATTTCCTTCTTCCCCTTGAAGTCATGGCCGAACACGGCGTCAAAGAGGAGGAGGTTTTTCGGCAGGGTCCTGCC
GCACATGGCCTTCAAGACGCCGTCTTCACTGTTGCAACACGTGCCAACGACCACCTTTTGACGGCCAAGGACATG
TTGAAGCGATTAAAAGAGGGCCAAGACGCCGGGCACCAGTTTGAACACGAGGGCGAAGCGCAACACGTCTATGGC
GACACAAACGACTCGGCGCAAGATCTGCGGCACGGTTTTGGCGTCTTGCTAGAAGCCACATCTGCAGGCCATTAT
CTCGAAAACTTGGAACGCGCCAACTTTGATCCTTTTGCTGTCAGAAGCGGCGGTTGGAGACTGCCGTGGAAAATA
TGGCAAGCCCTTTCTAAAGAGCGGTTATGA
Transcript >OphauB2|3798
ATGTCTTCGATTGGCCCGCTGCAGTCCATGAGACCTTGGCCCTTTCAAAGGCCTCTCCTTTCCATGCATCGGCCA
CGACTAGTACGCAGTGGCCTCAACAGGCTCGCCTTTGCTCGCACAAAATGTCGCCACTTCAATACCGATGCTCAT
GTCGATTCGGCCAGGAAATACTGCTTTGCCCAACTCTATAAAAGCGACTACGATGCGTACCTTATCCGCCGCCTC
GTCCCTCGCCCTGTACAAGACACTTATGCCGCTCTTCGCGCATTGAATCTCGAGCTTGTCCGGCTTCCCGAAGTC
ATATCCAACCCAACCATTGGCGCCATGCGCATCACCTTCTGGCAAGACTCAATAGACCAAACATTTTCTGACAAG
CCCCCGCGCGAGCCCATATGCCTACTCCTACATCACGGTCTACGGGCACTCGAAGCCAGAGCTGGTAGCGCGACC
AAAGCATCCATCAAGTTTTGGATCTCGCGTCTCATCAAAACACGCGCCAAATACATGGATAATCGTCCCTTTCCG
ACCATGGCCAGCCTCGAAGACTACGCCGAAAACACTTACTCGTCCATCATGTACGCCACGCTGGCTACCCTGCCG
CTTCGCTCCGTGCACATGGACCACATGGCTAGCCACATTGGCAAGGCCTGTGGAATTACTGCCATTTTACGCGGC
ATTCCGCTTCTCGCTGCTCGTGCTCAGCCTATCAAGACGCCCTCTGGCATAGAAGCACCCGTTACTCATGAACCC
CATTTCCTTCTTCCCCTTGAAGTCATGGCCGAACACGGCGTCAAAGAGGAGGAGGTTTTTCGGCAGGGTCCTGCC
GCACATGGCCTTCAAGACGCCGTCTTCACTGTTGCAACACGTGCCAACGACCACCTTTTGACGGCCAAGGACATG
TTGAAGCGATTAAAAGAGGGCCAAGACGCCGGGCACCAGTTTGAACACGAGGGCGAAGCGCAACACGTCTATGGC
GACACAAACGACTCGGCGCAAGATCTGCGGCACGGTTTTGGCGTCTTGCTAGAAGCCACATCTGCAGGCCATTAT
CTCGAAAACTTGGAACGCGCCAACTTTGATCCTTTTGCTGTCAGAAGCGGCGGTTGGAGACTGCCGTGGAAAATA
TGGCAAGCCCTTTCTAAAGAGCGGTTATGA
Gene >OphauB2|3798
ATGTCTTCGATTGGCCCGCTGCAGTCCATGAGACCTTGGCCCTTTCAAAGGCCTCTCCTTTCCATGCATCGGCCA
CGACTAGTACGCAGTGGCCTCAACAGGCTCGCCTTTGCTCGCACAAAATGTCGCCACTTCAATACCGATGCTCAT
GTCGATTCGGCCAGGAAATACTGCTTTGCCCAACTCTAGTCAGTCCTGGTACTGGCCTCTCGCCAAGCGCGTTAT
CCCTGACTGCAGAACAGTAAAAGCGACTACGATGCGTACCTTATCCGCCGCCTCGTCCCTCGCCCTGTACAAGAC
ACTTATGCCGCTCTTCGCGCATTGAATCTCGAGCTTGTCCGGCTTCCCGAAGTCATATCCAACCCAACCATTGGC
GCCATGCGCATCACCTTCTGGCAAGACTCAATAGACCAAACATTTTCTGACAAGCCCCCGCGCGAGCCCATATGC
CTACTCCTACATCACGGTCTACGGGCACTCGAAGCCAGAGCTGGTAGCGCGACCAAAGCATCCATCAAGTTTTGG
ATCTCGCGTCTCATCAAAACACGCGCCAAATACATGGATAATCGTCCCTTTCCGACCATGGCCAGCCTCGAAGAC
TACGCCGAAAACACTTACTCGTCCATCATGTACGCCACGCTGGCTACCCTGCCGCTTCGCTCCGTGCACATGGAC
CACATGGCTAGCCACATTGGCAAGGCCTGTGGAATTACTGCCATTTTACGCGGCATTCCGCTTCTCGCTGCTCGT
GCTCAGCCTATCAAGACGCCCTCTGGCATAGAAGCACCCGTTACTCATGAACCCCATTTCCTTCTTCCCCTTGAA
GTCATGGCCGAACACGGCGTCAAAGAGGAGGAGGTTTTTCGGCAGGGTCCTGCCGCACATGGCCTTCAAGACGCC
GTCTTCACTGTTGCAACACGTGCCAACGACCACCTTTTGACGGCCAAGGACATGTTGAAGCGATTAAAAGAGGGC
CAAGACGCCGGGCACCAGTTTGAACACGAGGGCGAAGCGCAACACGTCTATGGCGACACAAACGACTCGGCGCAA
GATCTGCGGCACGGTTTTGGCGTCTTGCTAGAAGCCACATCTGCAGGCCATTATCTCGAAAACTTGGAACGCGCC
AACTTTGATCCTTTTGCTGTCAGAAGCGGCGGTTGGAGACTGCCGTGGAAAATATGGCAAGCCCTTTCTAAAGAG
CGGTTATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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